| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229114
Identifier: 17229114
GI number: 17229114
Start: 1910570
End: 1911169
Strand: Direct
Name: 17229114
Synonym: alr1622
Alternate gene names: NA
Gene position: 1910570-1911169 (Clockwise)
Preceding gene: 17229113
Following gene: 17229115
Centisome position: 29.79
GC content: 39.33
Gene sequence:
>600_bases ATGACTAAAAAGACTTTAATTTTAATATTGTTAGCCCTGGGGTTGGGTGGTTTTGTTTATTTCTGGGAAATTCGAGGTGC TACTCAGCGAGAAGAGGCTAGGGAGAATCAACAGCAAATCTTTTCTTTTACAGAAGATGATGTCCAGTCTCTAACTGTAA AAACTCAGAAACTTACGGTGAATTTGGAACGGAACCCGCAGTCTAATCAGCCTAAGTGGTTGCTTAAATCTCCTGTATCA GAACCTGCAAACGAGCCTATAGTTAGTTATTTGATGGATTTATTGGTAAAAGGAAAGAGTACGAATACTATATCAACACC AGCTAACCAAATAGCCGAATTTGGTTTAGACCAACCCCAAGCCACCATCAACATTAACCTCAAAAATCAAAAAACCCATC AGTTAAGTCTGGGCAAGCCTGATTTTAACCGTCGTTTTGTCTATGCCCAAGCTGACCCTAGACCTCAACCAAATGGTAAG GTAAATGTGCTATTGGTATCTACAGATTTTGAAAATGCTGTCAATAGAGAACTATCAGAGTGGAAACAACCTGTAAGCTT GGATAAAGTTGAACCACAATCCACGCCAAATCTACCTTAA
Upstream 100 bases:
>100_bases TCGTTTTACCCTTACTCGGCTTAGTCACCGCCGCCACCATCTGGTGGAAGCGTAGATAAGAGGAGTTAACTGTTGACTGT TGACCCATGACCAATGAGCA
Downstream 100 bases:
>100_bases CCAACTCCCACCAATAGCCAATAAGCAGATATACAGATAAAATTCAGAATTCACCCTTAGGGTATTTTGAATTTCAAATT TGGAGCGAACTGACGTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTKKTLILILLALGLGGFVYFWEIRGATQREEARENQQQIFSFTEDDVQSLTVKTQKLTVNLERNPQSNQPKWLLKSPVS EPANEPIVSYLMDLLVKGKSTNTISTPANQIAEFGLDQPQATININLKNQKTHQLSLGKPDFNRRFVYAQADPRPQPNGK VNVLLVSTDFENAVNRELSEWKQPVSLDKVEPQSTPNLP
Sequences:
>Translated_199_residues MTKKTLILILLALGLGGFVYFWEIRGATQREEARENQQQIFSFTEDDVQSLTVKTQKLTVNLERNPQSNQPKWLLKSPVS EPANEPIVSYLMDLLVKGKSTNTISTPANQIAEFGLDQPQATININLKNQKTHQLSLGKPDFNRRFVYAQADPRPQPNGK VNVLLVSTDFENAVNRELSEWKQPVSLDKVEPQSTPNLP >Mature_198_residues TKKTLILILLALGLGGFVYFWEIRGATQREEARENQQQIFSFTEDDVQSLTVKTQKLTVNLERNPQSNQPKWLLKSPVSE PANEPIVSYLMDLLVKGKSTNTISTPANQIAEFGLDQPQATININLKNQKTHQLSLGKPDFNRRFVYAQADPRPQPNGKV NVLLVSTDFENAVNRELSEWKQPVSLDKVEPQSTPNLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22471; Mature: 22340
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKTLILILLALGLGGFVYFWEIRGATQREEARENQQQIFSFTEDDVQSLTVKTQKLTV CCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHEEEEEEEEE NLERNPQSNQPKWLLKSPVSEPANEPIVSYLMDLLVKGKSTNTISTPANQIAEFGLDQPQ EEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCC ATININLKNQKTHQLSLGKPDFNRRFVYAQADPRPQPNGKVNVLLVSTDFENAVNRELSE EEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHH WKQPVSLDKVEPQSTPNLP HHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKKTLILILLALGLGGFVYFWEIRGATQREEARENQQQIFSFTEDDVQSLTVKTQKLTV CCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHEEEEEEEEE NLERNPQSNQPKWLLKSPVSEPANEPIVSYLMDLLVKGKSTNTISTPANQIAEFGLDQPQ EEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCC ATININLKNQKTHQLSLGKPDFNRRFVYAQADPRPQPNGKVNVLLVSTDFENAVNRELSE EEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHH WKQPVSLDKVEPQSTPNLP HHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA