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The map label for this gene is 17229059

Identifier: 17229059

GI number: 17229059

Start: 1833470

End: 1834060

Strand: Direct

Name: 17229059

Synonym: alr1567

Alternate gene names: NA

Gene position: 1833470-1834060 (Clockwise)

Preceding gene: 17229058

Following gene: 17229060

Centisome position: 28.59

GC content: 38.92

Gene sequence:

>591_bases
ATGAACATTGAATACATTCCTATTGCGGCATTAAATCAATATGCCTATTGTTCCCATCGCTGTTGGCGGATGTTTTGTGC
AGGCGAATTTATTGATAATCAATACACCATCGAAGGCACAACTTTACATGATCGCGTCCACACTACCAGCGAAAATCAGC
GAGAAGAAACTTGGCAAGTCCGAGCAATTTGGTTGAAGTCAGACAAGTATCAACTCATTGGTAAATCTGACTTAATTGAA
TCAGCAGATGGTCAATTTTATCCTGTGGAATATAAACGCGGACGTAAAGGCGAATGGGATAATGATGAATTACAAGTCTG
CGCTCAAGCTTTATGTTTAGAAGAGATGACAGGGCAAACTATTACGACTGGATATATCTATTATGCTCACTCTCACCAAA
GGCAATTAGTAGAGATAAATCAGGAGTTAAGAAAAAGTGCGATCGCTACAATTCAAGCAGTCACAAATTTACTCACCACA
GGCATAATGCCCATACCAAATTATAGCAAACGCTGTCAAGGATGCAGTCTGAATTTACAATGTTTACCCAAGGCTATTGA
TAGGGTTAAAACTTACCAAGAAGTTAGTTAA

Upstream 100 bases:

>100_bases
TTAGCTTGATGTCCTAATCTATCTGGCTACGGCTATAACTACGAAATATTGTGTACAGACTTTGCACCGCAATTTCTGCA
ATAACCAATAACTAAAAACT

Downstream 100 bases:

>100_bases
CTTAGGCGTAATTTTAAACGCAGAGGGGCGCGGAGATAAGCGCAGAGGAGCGCTGAGATTCAGGTTCTAGTTAATAATAT
TTTGTACTGATGAATAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein; RecB Family Exonuclease; CRISPR-Associated Cas1/Cas4 Family Protein; CRISPR-Associated Exonuclease Cas4 Family; Endonuclease; Exonuclease RecB Family Protein; CRISPR-Associated Cas1 Family Protein; CRISPR-Associated Protein; Cas4 Family CRISPR-Associated Protein; Exonuclease N; PE-PGRS Family Protein; CRISPR-Associated RecB Family Exonuclease Cas4b; RecB Family Exonuclease Protein

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNIEYIPIAALNQYAYCSHRCWRMFCAGEFIDNQYTIEGTTLHDRVHTTSENQREETWQVRAIWLKSDKYQLIGKSDLIE
SADGQFYPVEYKRGRKGEWDNDELQVCAQALCLEEMTGQTITTGYIYYAHSHQRQLVEINQELRKSAIATIQAVTNLLTT
GIMPIPNYSKRCQGCSLNLQCLPKAIDRVKTYQEVS

Sequences:

>Translated_196_residues
MNIEYIPIAALNQYAYCSHRCWRMFCAGEFIDNQYTIEGTTLHDRVHTTSENQREETWQVRAIWLKSDKYQLIGKSDLIE
SADGQFYPVEYKRGRKGEWDNDELQVCAQALCLEEMTGQTITTGYIYYAHSHQRQLVEINQELRKSAIATIQAVTNLLTT
GIMPIPNYSKRCQGCSLNLQCLPKAIDRVKTYQEVS
>Mature_196_residues
MNIEYIPIAALNQYAYCSHRCWRMFCAGEFIDNQYTIEGTTLHDRVHTTSENQREETWQVRAIWLKSDKYQLIGKSDLIE
SADGQFYPVEYKRGRKGEWDNDELQVCAQALCLEEMTGQTITTGYIYYAHSHQRQLVEINQELRKSAIATIQAVTNLLTT
GIMPIPNYSKRCQGCSLNLQCLPKAIDRVKTYQEVS

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22673; Mature: 22673

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEYIPIAALNQYAYCSHRCWRMFCAGEFIDNQYTIEGTTLHDRVHTTSENQREETWQV
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECHHCCCCCCCHHHCEEE
RAIWLKSDKYQLIGKSDLIESADGQFYPVEYKRGRKGEWDNDELQVCAQALCLEEMTGQT
EEEEEECCCEEECCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCE
ITTGYIYYAHSHQRQLVEINQELRKSAIATIQAVTNLLTTGIMPIPNYSKRCQGCSLNLQ
EEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHH
CLPKAIDRVKTYQEVS
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIEYIPIAALNQYAYCSHRCWRMFCAGEFIDNQYTIEGTTLHDRVHTTSENQREETWQV
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECHHCCCCCCCHHHCEEE
RAIWLKSDKYQLIGKSDLIESADGQFYPVEYKRGRKGEWDNDELQVCAQALCLEEMTGQT
EEEEEECCCEEECCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCE
ITTGYIYYAHSHQRQLVEINQELRKSAIATIQAVTNLLTTGIMPIPNYSKRCQGCSLNLQ
EEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHH
CLPKAIDRVKTYQEVS
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA