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The map label for this gene is 17229058

Identifier: 17229058

GI number: 17229058

Start: 1832407

End: 1833279

Strand: Direct

Name: 17229058

Synonym: alr1566

Alternate gene names: NA

Gene position: 1832407-1833279 (Clockwise)

Preceding gene: 17229057

Following gene: 17229059

Centisome position: 28.57

GC content: 44.33

Gene sequence:

>873_bases
ATGCCTCATAGCTTAGTTTTAAACCTGCTTCCCCAATCTCCCATTCCTCCGCAATATCTCACCGGTAGACATTTACACGC
CTTATTTCTCACCCTTGTTAGTTCTGTTGATAGCACATTAGGCGATCGCTTGCACGACTCCACCGCCGATAAAGCCTTCA
CCCTTTCCCCCTTGCAAATTCAGGGAGAGGAACGGGGTAGATATAAATCGAAAATCCCTAATAGCTACTCGTTGCAATAC
TTGCATCAGCAAGCCATCCCCGCCGGAACGCCTTGTTGGTGGCGCATATCTTTACTTGATGACACCTTATTTAGCCAACT
AACGCAACTATGGCTCAATCTTAACCCTAACCATCCTTGGCATCTCGGCCCGGCTAACTTGTATATTACCAGCATTCAAG
GCACGCCCCAGTCTACCCAACCTTGGGCAAATGCTATTACCTATACTCAATTATATGAGCAAGCTGGTGAGAATAATGAC
CTGCGATCGCTCGGCAACAATCACACGCTAAATTTTACCTTCACCACACCCACCGCCTTCCGCCAGGGAAAATTTGACAC
TACCCTTCCCACTAGAGAATGTGTATTTAACTCCCTCCTTTCCCGATGGAATAAATACAGTGGTATAGAATTTTCTGAAA
TTGCTCTTGAAGCAATATTTCCCTCATTTCTCAATATTCATACAGAAATATTAGCCGATTCTCGTAGTAAATTTATTGGC
ATTCTTGGAGAAATCAACTATCGGATTTTAGGTGATATAGAGCCAATCCAAATTAAGCAAATCAACGCCTTAGCTGACTT
CGCTATGTATGCAGGGGTAGGGCGTAAAACCACAATGGGAATGGGCATGATTCGGCGGTTGTATTCTTCATGA

Upstream 100 bases:

>100_bases
CAGATATTCCAGAATTTACCATTGAATCCAGAGTTGCTCAAGCTACCACTAAAAAACGTAAGTCAGCTTAATTTTGAATT
TTGAATTTTGAATTGTTAAA

Downstream 100 bases:

>100_bases
TAGAAGAGATGAAGAGGCAGATCATGACTATTATAGCTGTTGACGGTTGACTGTTGACAGTTGACAGACTTGTGTTGTCA
GCGTTTGATCTTAGCTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cas Family Protein

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPHSLVLNLLPQSPIPPQYLTGRHLHALFLTLVSSVDSTLGDRLHDSTADKAFTLSPLQIQGEERGRYKSKIPNSYSLQY
LHQQAIPAGTPCWWRISLLDDTLFSQLTQLWLNLNPNHPWHLGPANLYITSIQGTPQSTQPWANAITYTQLYEQAGENND
LRSLGNNHTLNFTFTTPTAFRQGKFDTTLPTRECVFNSLLSRWNKYSGIEFSEIALEAIFPSFLNIHTEILADSRSKFIG
ILGEINYRILGDIEPIQIKQINALADFAMYAGVGRKTTMGMGMIRRLYSS

Sequences:

>Translated_290_residues
MPHSLVLNLLPQSPIPPQYLTGRHLHALFLTLVSSVDSTLGDRLHDSTADKAFTLSPLQIQGEERGRYKSKIPNSYSLQY
LHQQAIPAGTPCWWRISLLDDTLFSQLTQLWLNLNPNHPWHLGPANLYITSIQGTPQSTQPWANAITYTQLYEQAGENND
LRSLGNNHTLNFTFTTPTAFRQGKFDTTLPTRECVFNSLLSRWNKYSGIEFSEIALEAIFPSFLNIHTEILADSRSKFIG
ILGEINYRILGDIEPIQIKQINALADFAMYAGVGRKTTMGMGMIRRLYSS
>Mature_289_residues
PHSLVLNLLPQSPIPPQYLTGRHLHALFLTLVSSVDSTLGDRLHDSTADKAFTLSPLQIQGEERGRYKSKIPNSYSLQYL
HQQAIPAGTPCWWRISLLDDTLFSQLTQLWLNLNPNHPWHLGPANLYITSIQGTPQSTQPWANAITYTQLYEQAGENNDL
RSLGNNHTLNFTFTTPTAFRQGKFDTTLPTRECVFNSLLSRWNKYSGIEFSEIALEAIFPSFLNIHTEILADSRSKFIGI
LGEINYRILGDIEPIQIKQINALADFAMYAGVGRKTTMGMGMIRRLYSS

Specific function: Unknown

COG id: COG5551

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32742; Mature: 32610

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHSLVLNLLPQSPIPPQYLTGRHLHALFLTLVSSVDSTLGDRLHDSTADKAFTLSPLQI
CCHHHEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEE
QGEERGRYKSKIPNSYSLQYLHQQAIPAGTPCWWRISLLDDTLFSQLTQLWLNLNPNHPW
CCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCE
HLGPANLYITSIQGTPQSTQPWANAITYTQLYEQAGENNDLRSLGNNHTLNFTFTTPTAF
EECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCHH
RQGKFDTTLPTRECVFNSLLSRWNKYSGIEFSEIALEAIFPSFLNIHTEILADSRSKFIG
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHEE
ILGEINYRILGDIEPIQIKQINALADFAMYAGVGRKTTMGMGMIRRLYSS
HHHCCCEEEECCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PHSLVLNLLPQSPIPPQYLTGRHLHALFLTLVSSVDSTLGDRLHDSTADKAFTLSPLQI
CHHHEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEE
QGEERGRYKSKIPNSYSLQYLHQQAIPAGTPCWWRISLLDDTLFSQLTQLWLNLNPNHPW
CCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCE
HLGPANLYITSIQGTPQSTQPWANAITYTQLYEQAGENNDLRSLGNNHTLNFTFTTPTAF
EECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCHH
RQGKFDTTLPTRECVFNSLLSRWNKYSGIEFSEIALEAIFPSFLNIHTEILADSRSKFIG
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHEE
ILGEINYRILGDIEPIQIKQINALADFAMYAGVGRKTTMGMGMIRRLYSS
HHHCCCEEEECCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA