| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229032
Identifier: 17229032
GI number: 17229032
Start: 1801473
End: 1801859
Strand: Direct
Name: 17229032
Synonym: alr1540
Alternate gene names: NA
Gene position: 1801473-1801859 (Clockwise)
Preceding gene: 17229031
Following gene: 17229035
Centisome position: 28.09
GC content: 48.06
Gene sequence:
>387_bases ATGACTAACGCTAATGCTCAAGAAGCCTCTAAAGTTGCAGAACCTGTACTCCGTCAAGGTGACTCTGGTGCGGCTGTGAC TGAATTGCAAAGGTTGCTGAATGCCAAGGGTGTAAAGGTATCAGTTGATGGGATCTTTGGTGCGGGAACCCAAGCCGCAG TGATCAAATTTCAGCGCGCCAACGGTCTGACTGCTGATGGAATTGTTGGCTCAAAAACTTGGGTAGCTTTACGAAAGGTT CCTACTCCCACAATTCGTTTAGTAGATGTTGCTCTCAACTACGACCCAACCCAATTTCCCCATCAAGTAGCGGCTTTGGA ATGGCTGCAAAGTCAAATTCCCGCAGCTACACTCAATGAATTTGCTCGTCGTTGGCGGAATCAGTAG
Upstream 100 bases:
>100_bases TAATAGGTAATAGGAGATGAAAAAATTCTTCCGTAAATTGTCCAATCAATAATGTAGTTTTCCCATGTAATAAATCACCT AAATACAAAGGAAATTTCCC
Downstream 100 bases:
>100_bases GTTGAAAAGTAAGAGTTTGATAGACGTAGTGCAACTCAGCAAAATACAAATGATTAAGCTGTCGCGTATTTAACTTGTAC ATCTTTTCGTATTAGGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTNANAQEASKVAEPVLRQGDSGAAVTELQRLLNAKGVKVSVDGIFGAGTQAAVIKFQRANGLTADGIVGSKTWVALRKV PTPTIRLVDVALNYDPTQFPHQVAALEWLQSQIPAATLNEFARRWRNQ
Sequences:
>Translated_128_residues MTNANAQEASKVAEPVLRQGDSGAAVTELQRLLNAKGVKVSVDGIFGAGTQAAVIKFQRANGLTADGIVGSKTWVALRKV PTPTIRLVDVALNYDPTQFPHQVAALEWLQSQIPAATLNEFARRWRNQ >Mature_127_residues TNANAQEASKVAEPVLRQGDSGAAVTELQRLLNAKGVKVSVDGIFGAGTQAAVIKFQRANGLTADGIVGSKTWVALRKVP TPTIRLVDVALNYDPTQFPHQVAALEWLQSQIPAATLNEFARRWRNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13808; Mature: 13677
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNANAQEASKVAEPVLRQGDSGAAVTELQRLLNAKGVKVSVDGIFGAGTQAAVIKFQRA CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCEECCCCCEEEEEEECC NGLTADGIVGSKTWVALRKVPTPTIRLVDVALNYDPTQFPHQVAALEWLQSQIPAATLNE CCCCCCCCCCCHHHEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHH FARRWRNQ HHHHHCCC >Mature Secondary Structure TNANAQEASKVAEPVLRQGDSGAAVTELQRLLNAKGVKVSVDGIFGAGTQAAVIKFQRA CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCEECCCCCEEEEEEECC NGLTADGIVGSKTWVALRKVPTPTIRLVDVALNYDPTQFPHQVAALEWLQSQIPAATLNE CCCCCCCCCCCHHHEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHH FARRWRNQ HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA