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The map label for this gene is 17229031

Identifier: 17229031

GI number: 17229031

Start: 1800903

End: 1801370

Strand: Direct

Name: 17229031

Synonym: alr1539

Alternate gene names: NA

Gene position: 1800903-1801370 (Clockwise)

Preceding gene: 17229030

Following gene: 17229032

Centisome position: 28.08

GC content: 44.02

Gene sequence:

>468_bases
ATGATTATCGACCCTAAAAATGTGCCTATGGAAAGAGGCACAAATTACCCCGATGCTTTCAAAGCAATGGTTGCAGGACG
GATACGACAAAGGTTAGGCAACTTTGCTGGGTTGAAAAATTTTGGAGTCAACTTAGTGCAGTTAGAGCCAGGGAGTTTTT
CTGCTTTGAGACACTGGCATTCTCATCAAGATGAGTTTATTTATATATTGGCAGGTGAACTGACTTTAATTACAGATGCC
GGAGAAGAGATTCTCACACCAGGAATGGCGGCTGGATTTCCCGCAGGTGAAGCGAACGGACATCATTTAGTCAATAGGTC
TGCGGTGGTTGGGGTGTATTTAGAAGTAGGCGATCGCACCCCCAATGACCAAGGTTTTTATCCCGATGTACCAGATTTGA
TGACACCACCTAGTCCTGATGGCAAATCCAGACAATTTATTCACCAAGATGGAACGCGATATAAATAG

Upstream 100 bases:

>100_bases
TGGGAGCGTGTTTAGTGGTCAGTGGTTCAGTGGCGATCGCCTTAAAAAAAGCTTCATAGTCTAAAATCTACAACAAACTT
GTTTACTAGCTAATAATCTT

Downstream 100 bases:

>100_bases
GGTAATAGGTAATAGGAGATGAAAAAATTCTTCCGTAAATTGTCCAATCAATAATGTAGTTTTCCCATGTAATAAATCAC
CTAAATACAAAGGAAATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Domain Protein; Cupin Domain-Containing Protein; Cupin 2 Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; Transcriptional Regulator Protein; Sugar Oxidoreductase

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIIDPKNVPMERGTNYPDAFKAMVAGRIRQRLGNFAGLKNFGVNLVQLEPGSFSALRHWHSHQDEFIYILAGELTLITDA
GEEILTPGMAAGFPAGEANGHHLVNRSAVVGVYLEVGDRTPNDQGFYPDVPDLMTPPSPDGKSRQFIHQDGTRYK

Sequences:

>Translated_155_residues
MIIDPKNVPMERGTNYPDAFKAMVAGRIRQRLGNFAGLKNFGVNLVQLEPGSFSALRHWHSHQDEFIYILAGELTLITDA
GEEILTPGMAAGFPAGEANGHHLVNRSAVVGVYLEVGDRTPNDQGFYPDVPDLMTPPSPDGKSRQFIHQDGTRYK
>Mature_155_residues
MIIDPKNVPMERGTNYPDAFKAMVAGRIRQRLGNFAGLKNFGVNLVQLEPGSFSALRHWHSHQDEFIYILAGELTLITDA
GEEILTPGMAAGFPAGEANGHHLVNRSAVVGVYLEVGDRTPNDQGFYPDVPDLMTPPSPDGKSRQFIHQDGTRYK

Specific function: Unknown

COG id: COG3837

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17061; Mature: 17061

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDPKNVPMERGTNYPDAFKAMVAGRIRQRLGNFAGLKNFGVNLVQLEPGSFSALRHWH
CCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCHHHHHHH
SHQDEFIYILAGELTLITDAGEEILTPGMAAGFPAGEANGHHLVNRSAVVGVYLEVGDRT
CCCCCEEEEEECCEEEEECCCHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCC
PNDQGFYPDVPDLMTPPSPDGKSRQFIHQDGTRYK
CCCCCCCCCCCCCCCCCCCCCCCCHHECCCCCCCC
>Mature Secondary Structure
MIIDPKNVPMERGTNYPDAFKAMVAGRIRQRLGNFAGLKNFGVNLVQLEPGSFSALRHWH
CCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCHHHHHHH
SHQDEFIYILAGELTLITDAGEEILTPGMAAGFPAGEANGHHLVNRSAVVGVYLEVGDRT
CCCCCEEEEEECCEEEEECCCHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCC
PNDQGFYPDVPDLMTPPSPDGKSRQFIHQDGTRYK
CCCCCCCCCCCCCCCCCCCCCCCCHHECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA