Click here to switch to the map view.

The map label for this gene is 17228314

Identifier: 17228314

GI number: 17228314

Start: 943252

End: 944703

Strand: Direct

Name: 17228314

Synonym: alr0819

Alternate gene names: NA

Gene position: 943252-944703 (Clockwise)

Preceding gene: 17228311

Following gene: 17228315

Centisome position: 14.71

GC content: 39.05

Gene sequence:

>1452_bases
ATGCAGAAGCTAAACGGACTGCTAACAAATGACATCATAGAAGAATCAGCATGGGAAGCTCTAGAAAAATCGATTTTATA
TTATAAAGGTCGTCCAGTAGGGACGGTTGCAGCCTTTGATGCTTCTGTAGAAGCATTAAATTATGACCAATGTTTTGTGA
GGGATTTTGTTTCATCAGCCCTAATTTTCTTGATTAAGGGTAAAACAGATATTGTCCGCAACTTTCTAGAAGAAACATTA
AAATTACAGCCTAAAGATAGACAGTTAGATGCTTATAAGCCAGGGCGGGGATTAATTCCAGCTAGCTTTAAAGTAGTCTC
AGATAATGGTGAAGAATATTTAGAGGCAGATTTTGGTGAACACGCGATCGCACGCGTTACACCAGTTGATTCTTGTTTAT
GGTGGATTCTTTTATTGCGTGCCTATGTAGTAGCCAGCAAAGATTTTTCTTTAGCATATCAGCCAGAATTCCAAACAGGT
ATTCGGCTAATTATGGAAATATGCTTGGCAAATCGTTTTGATATGTATCCAACATTATTGGTTCCTGATGGTGCCTGCAT
GATTGACCGCCGTTTAGGTATTTATGGTCATCCTTTGGAACTACAAGTTTTATTTTATGCGGCGTTACGTGCAGCCCGTG
AAATGTTAATTTGCCAAGGAAATCAAGATGTTGTGGAAGCAATTGATAACCGCCTACCGCTTTTGTGCGCCCACATCCGC
CAACATTATTGGATAGATATTAATCGCTTAAATGCAATTTATCGCTTCAAGAGTGAAGAATACGGTAAAGCAGCCGTCAA
CTTATTTAACATTTATGTAGACTCAATTCCCTATTACGAATTAGATAAATGGTTGCCTAAAAAAGGTGGTTATTTAGCTG
GTAATGTTGGCCCTTCCCAGTTGGATACTCGCTTTTTTGCCCTGGGTAATTTGATGGCGATTATTTCTGACTTAGCCACA
GAGGAACAGTCACAAGCCATTATGACTCTCATCGAAGATAGATGGGAAGATTTGGTAGGAGATATGCCAATGAAAATTTG
CTACCCAGCTTTAGAAAATGAAGAATATAGAATTGTCACAGGGTGCGACCCAAAAAATATACCTTGGTCGTATCATAATG
CAGGAAGTTGGCCAGTTTTGATGTGGATGCTAGCAGCAGCATCTGTAAAAGCTGGTAAACCTTATATAGCAGGTAAAGCT
ATTGAAATTGCTCAAGCACGCCTTTTAGAAGATGAGTGGCCAGAGTATTACGACGGCAAGAAAGGAAGACTCATTGGTAA
ACAAGCCAGAAAATATCAAACCTGGACAATAGCTGGCTTTTTATTAGCGGCGGAATTGATGAAAAATCCTTCCCTTTTGT
CATTAATTAGTTTTGATAAACTACCATCAGAATTGGTTTCCAGAGCGTGTGAATTTGAAATTGGCAGTGTAGATGCTTCT
ATATCTCGATAA

Upstream 100 bases:

>100_bases
TGTAGGCTATTTAAACAATTATCTTTGCTATTTATGCGAAGGTAATACTACCAAAGCGCATCTACCAAAAATTCACACCC
CCAATGGAGTTAATCTGGCG

Downstream 100 bases:

>100_bases
ATTTTTATTTACACTTATATGCTCTAAAATTTTATTGCGTAACCCCTTGTAATTGCCAGGGGTTTTTTATTTTTCATCTC
CCAGAATGTTGGGATAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Neutral Invertase-Like Protein; Neutral Invertase Like Protein; Plant Neutral Invertase Superfamily; LIM17 Protein

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MQKLNGLLTNDIIEESAWEALEKSILYYKGRPVGTVAAFDASVEALNYDQCFVRDFVSSALIFLIKGKTDIVRNFLEETL
KLQPKDRQLDAYKPGRGLIPASFKVVSDNGEEYLEADFGEHAIARVTPVDSCLWWILLLRAYVVASKDFSLAYQPEFQTG
IRLIMEICLANRFDMYPTLLVPDGACMIDRRLGIYGHPLELQVLFYAALRAAREMLICQGNQDVVEAIDNRLPLLCAHIR
QHYWIDINRLNAIYRFKSEEYGKAAVNLFNIYVDSIPYYELDKWLPKKGGYLAGNVGPSQLDTRFFALGNLMAIISDLAT
EEQSQAIMTLIEDRWEDLVGDMPMKICYPALENEEYRIVTGCDPKNIPWSYHNAGSWPVLMWMLAAASVKAGKPYIAGKA
IEIAQARLLEDEWPEYYDGKKGRLIGKQARKYQTWTIAGFLLAAELMKNPSLLSLISFDKLPSELVSRACEFEIGSVDAS
ISR

Sequences:

>Translated_483_residues
MQKLNGLLTNDIIEESAWEALEKSILYYKGRPVGTVAAFDASVEALNYDQCFVRDFVSSALIFLIKGKTDIVRNFLEETL
KLQPKDRQLDAYKPGRGLIPASFKVVSDNGEEYLEADFGEHAIARVTPVDSCLWWILLLRAYVVASKDFSLAYQPEFQTG
IRLIMEICLANRFDMYPTLLVPDGACMIDRRLGIYGHPLELQVLFYAALRAAREMLICQGNQDVVEAIDNRLPLLCAHIR
QHYWIDINRLNAIYRFKSEEYGKAAVNLFNIYVDSIPYYELDKWLPKKGGYLAGNVGPSQLDTRFFALGNLMAIISDLAT
EEQSQAIMTLIEDRWEDLVGDMPMKICYPALENEEYRIVTGCDPKNIPWSYHNAGSWPVLMWMLAAASVKAGKPYIAGKA
IEIAQARLLEDEWPEYYDGKKGRLIGKQARKYQTWTIAGFLLAAELMKNPSLLSLISFDKLPSELVSRACEFEIGSVDAS
ISR
>Mature_483_residues
MQKLNGLLTNDIIEESAWEALEKSILYYKGRPVGTVAAFDASVEALNYDQCFVRDFVSSALIFLIKGKTDIVRNFLEETL
KLQPKDRQLDAYKPGRGLIPASFKVVSDNGEEYLEADFGEHAIARVTPVDSCLWWILLLRAYVVASKDFSLAYQPEFQTG
IRLIMEICLANRFDMYPTLLVPDGACMIDRRLGIYGHPLELQVLFYAALRAAREMLICQGNQDVVEAIDNRLPLLCAHIR
QHYWIDINRLNAIYRFKSEEYGKAAVNLFNIYVDSIPYYELDKWLPKKGGYLAGNVGPSQLDTRFFALGNLMAIISDLAT
EEQSQAIMTLIEDRWEDLVGDMPMKICYPALENEEYRIVTGCDPKNIPWSYHNAGSWPVLMWMLAAASVKAGKPYIAGKA
IEIAQARLLEDEWPEYYDGKKGRLIGKQARKYQTWTIAGFLLAAELMKNPSLLSLISFDKLPSELVSRACEFEIGSVDAS
ISR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54715; Mature: 54715

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLNGLLTNDIIEESAWEALEKSILYYKGRPVGTVAAFDASVEALNYDQCFVRDFVSSA
CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCHHHCCCHHHHHHHHHHHH
LIFLIKGKTDIVRNFLEETLKLQPKDRQLDAYKPGRGLIPASFKVVSDNGEEYLEADFGE
EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCC
HAIARVTPVDSCLWWILLLRAYVVASKDFSLAYQPEFQTGIRLIMEICLANRFDMYPTLL
CCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCEEE
VPDGACMIDRRLGIYGHPLELQVLFYAALRAAREMLICQGNQDVVEAIDNRLPLLCAHIR
ECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCHHHHHHHHH
QHYWIDINRLNAIYRFKSEEYGKAAVNLFNIYVDSIPYYELDKWLPKKGGYLAGNVGPSQ
HHEEEEHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEECCCCHHH
LDTRFFALGNLMAIISDLATEEQSQAIMTLIEDRWEDLVGDMPMKICYPALENEEYRIVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEE
GCDPKNIPWSYHNAGSWPVLMWMLAAASVKAGKPYIAGKAIEIAQARLLEDEWPEYYDGK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCC
KGRLIGKQARKYQTWTIAGFLLAAELMKNPSLLSLISFDKLPSELVSRACEFEIGSVDAS
CCCEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
ISR
CCC
>Mature Secondary Structure
MQKLNGLLTNDIIEESAWEALEKSILYYKGRPVGTVAAFDASVEALNYDQCFVRDFVSSA
CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCHHHCCCHHHHHHHHHHHH
LIFLIKGKTDIVRNFLEETLKLQPKDRQLDAYKPGRGLIPASFKVVSDNGEEYLEADFGE
EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCC
HAIARVTPVDSCLWWILLLRAYVVASKDFSLAYQPEFQTGIRLIMEICLANRFDMYPTLL
CCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCEEE
VPDGACMIDRRLGIYGHPLELQVLFYAALRAAREMLICQGNQDVVEAIDNRLPLLCAHIR
ECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCHHHHHHHHH
QHYWIDINRLNAIYRFKSEEYGKAAVNLFNIYVDSIPYYELDKWLPKKGGYLAGNVGPSQ
HHEEEEHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEECCCCHHH
LDTRFFALGNLMAIISDLATEEQSQAIMTLIEDRWEDLVGDMPMKICYPALENEEYRIVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEE
GCDPKNIPWSYHNAGSWPVLMWMLAAASVKAGKPYIAGKAIEIAQARLLEDEWPEYYDGK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCC
KGRLIGKQARKYQTWTIAGFLLAAELMKNPSLLSLISFDKLPSELVSRACEFEIGSVDAS
CCCEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
ISR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA