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The map label for this gene is yurN [H]

Identifier: 17228233

GI number: 17228233

Start: 859612

End: 860538

Strand: Direct

Name: yurN [H]

Synonym: alr0738

Alternate gene names: 17228233

Gene position: 859612-860538 (Clockwise)

Preceding gene: 17228230

Following gene: 17228234

Centisome position: 13.4

GC content: 41.86

Gene sequence:

>927_bases
ATGAATCAATTGACAGTTAAAGATTGGACAGTCATCAAGCGGCAGCTGACTCCTTATCTGTTCTTGCTACCTGCTTTGGT
TTTGTTGGGGTTAACTGTCTTTTGGCCAGCATTGCAAGCCTTTTACCTGAGTTTTACTAGCTACGAAGACTTAAGCCAAC
CGCCGCAGTGGATAGGTTTTAAAAACTTTCTTCGGTTGTGGAAAGATGCCGTTTTTTGGAAAACTTTAGAAAATACATTT
CTTTATCTTGTTGCTGTAGTGCCGATTTTGGTGATTGCGCCTCTAGGGTTGGCAATTTTAGTTAATCAAAAACTACGCGG
AATTAATTGGTTTAGAGCCGCATACTACACGCCAGTAGTAATTTCTATGGTGGTTGCTGGTATCGCTTGGAAATGGCTAT
ACGCCGAAAATGGCTTACTTAATCAGTTGCTAAAAACCATCGGTCTTTTCCCAGAAGGAATTCCCTGGCTCACAACTTCC
GCTAAAATTTTCGGGATTGTACCAATTTCTCTAGCCAGCGTCATGGCTGTGACGATATGGAAAGGACTAGGCTATTACAT
GGTGATTTATCTAGCTGGGTTGCAATCAATTCCCGCAGATGTGTATGAAGCCGCCGCCATTGATGGCTCAGATGGGATTA
GTAAACATTGGGATATTACCATCCCTTTAATGAAACCTTATTTAGCACTAGTAGCAGTAATTTCCGCGATTTCCGCTACT
AAGGTGTTTGAGGAAGTGTATATCATGACTCAAGGCGGGCCACTCAATAGCTCGAAAACCATTGTTTATTATCTATATGA
GCAAGCCTTCAGTAATTTAGAAATCAGCTACGCCTGCACCATTGGACTCGTACTATTTTTGATAATTTTGGCTTTATCAG
TGTTGCGGTTAGTGATTAGTCCACCAGGGGGAGACGGTCTAGTTTAA

Upstream 100 bases:

>100_bases
AGATAGCTATTGGCTTTTCGCCCATCTTCCTGCGGAATCAGTGGCAACTGTTCGTGTAATATGAATTAGCTTTTCTATGT
AGCAGATATAAAACGCTTTT

Downstream 100 bases:

>100_bases
TACTTAGACTACCGCCTTAAATTTTCCTATGCTACATTGGGTTACAAGATAGTAATACATTTGCCGAGCTATGGTTTGGG
TTCTGTATACCCGACTGGTG

Product: permease protein of sugar ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNQLTVKDWTVIKRQLTPYLFLLPALVLLGLTVFWPALQAFYLSFTSYEDLSQPPQWIGFKNFLRLWKDAVFWKTLENTF
LYLVAVVPILVIAPLGLAILVNQKLRGINWFRAAYYTPVVISMVVAGIAWKWLYAENGLLNQLLKTIGLFPEGIPWLTTS
AKIFGIVPISLASVMAVTIWKGLGYYMVIYLAGLQSIPADVYEAAAIDGSDGISKHWDITIPLMKPYLALVAVISAISAT
KVFEEVYIMTQGGPLNSSKTIVYYLYEQAFSNLEISYACTIGLVLFLIILALSVLRLVISPPGGDGLV

Sequences:

>Translated_308_residues
MNQLTVKDWTVIKRQLTPYLFLLPALVLLGLTVFWPALQAFYLSFTSYEDLSQPPQWIGFKNFLRLWKDAVFWKTLENTF
LYLVAVVPILVIAPLGLAILVNQKLRGINWFRAAYYTPVVISMVVAGIAWKWLYAENGLLNQLLKTIGLFPEGIPWLTTS
AKIFGIVPISLASVMAVTIWKGLGYYMVIYLAGLQSIPADVYEAAAIDGSDGISKHWDITIPLMKPYLALVAVISAISAT
KVFEEVYIMTQGGPLNSSKTIVYYLYEQAFSNLEISYACTIGLVLFLIILALSVLRLVISPPGGDGLV
>Mature_308_residues
MNQLTVKDWTVIKRQLTPYLFLLPALVLLGLTVFWPALQAFYLSFTSYEDLSQPPQWIGFKNFLRLWKDAVFWKTLENTF
LYLVAVVPILVIAPLGLAILVNQKLRGINWFRAAYYTPVVISMVVAGIAWKWLYAENGLLNQLLKTIGLFPEGIPWLTTS
AKIFGIVPISLASVMAVTIWKGLGYYMVIYLAGLQSIPADVYEAAAIDGSDGISKHWDITIPLMKPYLALVAVISAISAT
KVFEEVYIMTQGGPLNSSKTIVYYLYEQAFSNLEISYACTIGLVLFLIILALSVLRLVISPPGGDGLV

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=293, Percent_Identity=27.9863481228669, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787570, Length=270, Percent_Identity=27.4074074074074, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790465, Length=259, Percent_Identity=27.4131274131274, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34268; Mature: 34268

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLTVKDWTVIKRQLTPYLFLLPALVLLGLTVFWPALQAFYLSFTSYEDLSQPPQWIGF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHCCH
KNFLRLWKDAVFWKTLENTFLYLVAVVPILVIAPLGLAILVNQKLRGINWFRAAYYTPVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ISMVVAGIAWKWLYAENGLLNQLLKTIGLFPEGIPWLTTSAKIFGIVPISLASVMAVTIW
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
KGLGYYMVIYLAGLQSIPADVYEAAAIDGSDGISKHWDITIPLMKPYLALVAVISAISAT
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
KVFEEVYIMTQGGPLNSSKTIVYYLYEQAFSNLEISYACTIGLVLFLIILALSVLRLVIS
HHHHHHHEEECCCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PPGGDGLV
CCCCCCCC
>Mature Secondary Structure
MNQLTVKDWTVIKRQLTPYLFLLPALVLLGLTVFWPALQAFYLSFTSYEDLSQPPQWIGF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHCCH
KNFLRLWKDAVFWKTLENTFLYLVAVVPILVIAPLGLAILVNQKLRGINWFRAAYYTPVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ISMVVAGIAWKWLYAENGLLNQLLKTIGLFPEGIPWLTTSAKIFGIVPISLASVMAVTIW
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
KGLGYYMVIYLAGLQSIPADVYEAAAIDGSDGISKHWDITIPLMKPYLALVAVISAISAT
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
KVFEEVYIMTQGGPLNSSKTIVYYLYEQAFSNLEISYACTIGLVLFLIILALSVLRLVIS
HHHHHHHEEECCCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PPGGDGLV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]