| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228234
Identifier: 17228234
GI number: 17228234
Start: 861217
End: 861798
Strand: Direct
Name: 17228234
Synonym: alr0739
Alternate gene names: NA
Gene position: 861217-861798 (Clockwise)
Preceding gene: 17228233
Following gene: 17228235
Centisome position: 13.43
GC content: 35.05
Gene sequence:
>582_bases ATGCCCAACTTTGATAATCAATTACAAACGTTCCAAGCCAGCGATCGCCAAGAATGGCGGGAATGGTTAGAGAAAAACTA TCAAACATCTATTGGTGTATGGCTAATTTATTACAAAGTCAAAAGTGGTAAACCAAGTATTAAATATAATGAAGCAGTCA AAGAAGCCTTATGTTTTGGTTGGATTGACAGTAAAGTTAAATCTTTAGATGAAGAACGTTATATGCAGATATTTACTCCT CGGAAACCGAAAAGTGTATGGTCAAAATTAAATAAACAATATATCCAAGAACTGAGTGAGCAAGGTTTGATGATTGAGGC TGGTTTAGCGAAGATTGCAGCCGCAAAACAAGATGGTTCATGGACTAAGTTAGATGACATAGAAGCATTAATTATTCCAG AGGATTTACAACAAGCCTTAGCAGCAAATGAAACGGCTAATCAATATTTTTTGGGATTAAGTAACTCATCGAAAAAAAAT ATTCTCTCCTGGATTGCTAGCGCTAAACGTCCAGAAACAAGATTGAAGCGAATTGAGCAAACTATCAATTCAACAGCACA AAATAAACTTCCTAAGTTATAA
Upstream 100 bases:
>100_bases TGTAAACACCTACATTTGCAGAGTTTTAAAATATAGTGTAGTATGTGTAGTATAAACGAGCTTGATAGGATATCAACTTC TTTATTCATAAGTTACTGCT
Downstream 100 bases:
>100_bases ATGTATTTGTTTCGTCATTTCCCAGTTATCTATATAAATTTATATGTGGAAAACATTTTATATTAAACCTAACGAAATCG GGATTTTATATCATCGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MPNFDNQLQTFQASDRQEWREWLEKNYQTSIGVWLIYYKVKSGKPSIKYNEAVKEALCFGWIDSKVKSLDEERYMQIFTP RKPKSVWSKLNKQYIQELSEQGLMIEAGLAKIAAAKQDGSWTKLDDIEALIIPEDLQQALAANETANQYFLGLSNSSKKN ILSWIASAKRPETRLKRIEQTINSTAQNKLPKL
Sequences:
>Translated_193_residues MPNFDNQLQTFQASDRQEWREWLEKNYQTSIGVWLIYYKVKSGKPSIKYNEAVKEALCFGWIDSKVKSLDEERYMQIFTP RKPKSVWSKLNKQYIQELSEQGLMIEAGLAKIAAAKQDGSWTKLDDIEALIIPEDLQQALAANETANQYFLGLSNSSKKN ILSWIASAKRPETRLKRIEQTINSTAQNKLPKL >Mature_192_residues PNFDNQLQTFQASDRQEWREWLEKNYQTSIGVWLIYYKVKSGKPSIKYNEAVKEALCFGWIDSKVKSLDEERYMQIFTPR KPKSVWSKLNKQYIQELSEQGLMIEAGLAKIAAAKQDGSWTKLDDIEALIIPEDLQQALAANETANQYFLGLSNSSKKNI LSWIASAKRPETRLKRIEQTINSTAQNKLPKL
Specific function: Unknown
COG id: COG4430
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22278; Mature: 22146
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNFDNQLQTFQASDRQEWREWLEKNYQTSIGVWLIYYKVKSGKPSIKYNEAVKEALCFG CCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHH WIDSKVKSLDEERYMQIFTPRKPKSVWSKLNKQYIQELSEQGLMIEAGLAKIAAAKQDGS HHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCC WTKLDDIEALIIPEDLQQALAANETANQYFLGLSNSSKKNILSWIASAKRPETRLKRIEQ CCCCCCCEEEECCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHH TINSTAQNKLPKL HHHHHHHHCCCCC >Mature Secondary Structure PNFDNQLQTFQASDRQEWREWLEKNYQTSIGVWLIYYKVKSGKPSIKYNEAVKEALCFG CCCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHH WIDSKVKSLDEERYMQIFTPRKPKSVWSKLNKQYIQELSEQGLMIEAGLAKIAAAKQDGS HHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCC WTKLDDIEALIIPEDLQQALAANETANQYFLGLSNSSKKNILSWIASAKRPETRLKRIEQ CCCCCCCEEEECCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHH TINSTAQNKLPKL HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA