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The map label for this gene is hupE [H]

Identifier: 17228193

GI number: 17228193

Start: 804890

End: 805993

Strand: Direct

Name: hupE [H]

Synonym: alr0698

Alternate gene names: 17228193

Gene position: 804890-805993 (Clockwise)

Preceding gene: 17228192

Following gene: 17228194

Centisome position: 12.55

GC content: 39.76

Gene sequence:

>1104_bases
ATGGATTTTTCAAAAACTAACTCAGTACCAAATCCTTTATTTCAGAAAATTGAACAAGTCCGCCGTCGCCCAGGTAAAGT
AAGAGATACTCACATTACTTTGGCACATGGTAGTGGTGGTAAAGCCATGCGCGACTTAATAGATGATATTTTTGTCAACA
ATTTTGATAATCCCATCCTCTCTCAACTAGAAGACCAAGCCACTATCAATTTATCTACTCTTTTACAACAGGGGGAGAGG
CTGGCTTTTACCACAGATTCCTATGTGGTAGACCCGTTATTTTTTCCCGGTAGTGATATAGGAGAATTAGCAATTAATGG
CACAATAAATGACTTAGCTGTTAGTGGTGCTAAACCCTTATATTTTACCTGTAGCGTCATTTTAGAAGAAGGTTTACCGA
TAGAAACTTTGCGTCGTGTTGCTACCAGCATGAAAGTAGCTGCCCAAAAAGCCGGAGTGCAAATTGTGACTGGTGACACC
AAAGTTGTTCCTCGCGGATGTGCTGATAAACTCTTTATTAACACGGCTGGTATTGGTATTATTCCATCGGGAATTGATAT
TTCTGCACATAATATTCAACCAGGAGATTCTATAATTATTAATGGTGAATTAGGTAATCATGGGGCAGCAATTTTAATTG
CCCGTGGTGAATTAGCCTTAGAAACTAATATAGAAAGTGACTGTCAAGCCTTACATGATTTAGTGGCTACTATCCTTAAT
GTTTGCCCTCAAGTTCATGCTATGCGAGATGCTACAAGGGGAGGATTAGCTACAGTTTTAAATGAATTTGCTACCAGTTC
TCATGTCGGAATACGCCTGTACGAAGAATCTCTACCAGTGCGTGAGGAAGTCAAGGGAATGTGTGAGATTTTAGGTTTAG
ACCCTTTATATTTAGCGAATGAAGGCAAATTAGTAGTAGTGGTAGATAGTGAACAAGCACAAGCTGTTTTATCTGCGATG
AAATCTCATCCAAAAGGACGAGATGCGTGTATTGTGGGTGAAGTTATGGCTACGCCTCCGGGAGTAGTTTTTCTAAAAAC
TACTTTTGGTACAGAACGGATTGTTGATATGCTAGTCGGTGAGCAATTACCGCGTATTTGTTAA

Upstream 100 bases:

>100_bases
CCGCTAAATAATATAGTATGTTGGGCTAACGACTTAACACACCCCACTTAAAATTTACTTGATAAACACTTTTTTAATTA
CCAACTACGAATTATAAAAA

Downstream 100 bases:

>100_bases
TTATAAGTAGAGCGTTTCATGCACGAACTAGGAATTACACAAAATATCGTAGCTATTGTTAGTGAATATGCTCAAGGCTC
AAAAGTAAACCGAATTTTAT

Product: hydrogenase expression/formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MDFSKTNSVPNPLFQKIEQVRRRPGKVRDTHITLAHGSGGKAMRDLIDDIFVNNFDNPILSQLEDQATINLSTLLQQGER
LAFTTDSYVVDPLFFPGSDIGELAINGTINDLAVSGAKPLYFTCSVILEEGLPIETLRRVATSMKVAAQKAGVQIVTGDT
KVVPRGCADKLFINTAGIGIIPSGIDISAHNIQPGDSIIINGELGNHGAAILIARGELALETNIESDCQALHDLVATILN
VCPQVHAMRDATRGGLATVLNEFATSSHVGIRLYEESLPVREEVKGMCEILGLDPLYLANEGKLVVVVDSEQAQAVLSAM
KSHPKGRDACIVGEVMATPPGVVFLKTTFGTERIVDMLVGEQLPRIC

Sequences:

>Translated_367_residues
MDFSKTNSVPNPLFQKIEQVRRRPGKVRDTHITLAHGSGGKAMRDLIDDIFVNNFDNPILSQLEDQATINLSTLLQQGER
LAFTTDSYVVDPLFFPGSDIGELAINGTINDLAVSGAKPLYFTCSVILEEGLPIETLRRVATSMKVAAQKAGVQIVTGDT
KVVPRGCADKLFINTAGIGIIPSGIDISAHNIQPGDSIIINGELGNHGAAILIARGELALETNIESDCQALHDLVATILN
VCPQVHAMRDATRGGLATVLNEFATSSHVGIRLYEESLPVREEVKGMCEILGLDPLYLANEGKLVVVVDSEQAQAVLSAM
KSHPKGRDACIVGEVMATPPGVVFLKTTFGTERIVDMLVGEQLPRIC
>Mature_367_residues
MDFSKTNSVPNPLFQKIEQVRRRPGKVRDTHITLAHGSGGKAMRDLIDDIFVNNFDNPILSQLEDQATINLSTLLQQGER
LAFTTDSYVVDPLFFPGSDIGELAINGTINDLAVSGAKPLYFTCSVILEEGLPIETLRRVATSMKVAAQKAGVQIVTGDT
KVVPRGCADKLFINTAGIGIIPSGIDISAHNIQPGDSIIINGELGNHGAAILIARGELALETNIESDCQALHDLVATILN
VCPQVHAMRDATRGGLATVLNEFATSSHVGIRLYEESLPVREEVKGMCEILGLDPLYLANEGKLVVVVDSEQAQAVLSAM
KSHPKGRDACIVGEVMATPPGVVFLKTTFGTERIVDMLVGEQLPRIC

Specific function: Unknown

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

Organism=Escherichia coli, GI226510967, Length=337, Percent_Identity=53.4124629080119, Blast_Score=357, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 39388; Mature: 39388

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSKTNSVPNPLFQKIEQVRRRPGKVRDTHITLAHGSGGKAMRDLIDDIFVNNFDNPIL
CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHH
SQLEDQATINLSTLLQQGERLAFTTDSYVVDPLFFPGSDIGELAINGTINDLAVSGAKPL
HHHHHHHEEEHHHHHHCCCEEEEECCCEEECCEECCCCCCCCEEECCCHHHHEECCCCCC
YFTCSVILEEGLPIETLRRVATSMKVAAQKAGVQIVTGDTKVVPRGCADKLFINTAGIGI
EEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCEECCCCCCCEEEEEECCCEE
IPSGIDISAHNIQPGDSIIINGELGNHGAAILIARGELALETNIESDCQALHDLVATILN
EECCCEEEECCCCCCCEEEEECCCCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHH
VCPQVHAMRDATRGGLATVLNEFATSSHVGIRLYEESLPVREEVKGMCEILGLDPLYLAN
HCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEC
EGKLVVVVDSEQAQAVLSAMKSHPKGRDACIVGEVMATPPGVVFLKTTFGTERIVDMLVG
CCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECHHHCCCCCEEEEEECCCHHHHHHHHHH
EQLPRIC
HCCCCCC
>Mature Secondary Structure
MDFSKTNSVPNPLFQKIEQVRRRPGKVRDTHITLAHGSGGKAMRDLIDDIFVNNFDNPIL
CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHH
SQLEDQATINLSTLLQQGERLAFTTDSYVVDPLFFPGSDIGELAINGTINDLAVSGAKPL
HHHHHHHEEEHHHHHHCCCEEEEECCCEEECCEECCCCCCCCEEECCCHHHHEECCCCCC
YFTCSVILEEGLPIETLRRVATSMKVAAQKAGVQIVTGDTKVVPRGCADKLFINTAGIGI
EEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCEECCCCCCCEEEEEECCCEE
IPSGIDISAHNIQPGDSIIINGELGNHGAAILIARGELALETNIESDCQALHDLVATILN
EECCCEEEECCCCCCCEEEEECCCCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHH
VCPQVHAMRDATRGGLATVLNEFATSSHVGIRLYEESLPVREEVKGMCEILGLDPLYLAN
HCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEC
EGKLVVVVDSEQAQAVLSAMKSHPKGRDACIVGEVMATPPGVVFLKTTFGTERIVDMLVG
CCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECHHHCCCCCEEEEEECCCHHHHHHHHHH
EQLPRIC
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]