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The map label for this gene is hupC [H]

Identifier: 17228190

GI number: 17228190

Start: 803006

End: 803254

Strand: Direct

Name: hupC [H]

Synonym: asr0695

Alternate gene names: 17228190

Gene position: 803006-803254 (Clockwise)

Preceding gene: 17228189

Following gene: 17228191

Centisome position: 12.52

GC content: 42.17

Gene sequence:

>249_bases
ATGTGTTTAGGAATCCCCGGACAAATTACCGAAATCACCGACATTAACCACAAACTAGCTATTGTCGATGTGGGTGGAGT
AAAACGCCAAGTCAATATCGCTTGTATAGTAGACGAACAACATCCCCCAGAAGCGTGTTTAGGAGATTGGGTGTTAGTTC
ATGTAGGCTTTGCTATGAATAGAATCAACGAACAAGAAGCAGCCGAAACCCTAAAATTATTACAAGAAATCGCCGCCCTA
CAAGCATAA

Upstream 100 bases:

>100_bases
TTTCAGTATCTCTTAAAAACACCTCCCTACGCCTCTGCGTGAAAAAATATTTATTGCGAATTGCGAATTGGTTTTATCTC
TCCAATAAGGAACAATAAAA

Downstream 100 bases:

>100_bases
ATATTTTCTAATAATTACGAATTAAGAACTATGAAATATGTCGATGAATTTCGGGAACCAGAAAAAGCTGAAGCCTTACG
CCGTGAGATAGAAAAACTCA

Product: hydrogenase expression/formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MCLGIPGQITEITDINHKLAIVDVGGVKRQVNIACIVDEQHPPEACLGDWVLVHVGFAMNRINEQEAAETLKLLQEIAAL
QA

Sequences:

>Translated_82_residues
MCLGIPGQITEITDINHKLAIVDVGGVKRQVNIACIVDEQHPPEACLGDWVLVHVGFAMNRINEQEAAETLKLLQEIAAL
QA
>Mature_82_residues
MCLGIPGQITEITDINHKLAIVDVGGVKRQVNIACIVDEQHPPEACLGDWVLVHVGFAMNRINEQEAAETLKLLQEIAAL
QA

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

Organism=Escherichia coli, GI1789364, Length=77, Percent_Identity=50.6493506493506, Blast_Score=74, Evalue=2e-15,
Organism=Escherichia coli, GI1789083, Length=79, Percent_Identity=48.1012658227848, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 8914; Mature: 8914

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLGIPGQITEITDINHKLAIVDVGGVKRQVNIACIVDEQHPPEACLGDWVLVHVGFAMN
CCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
RINEQEAAETLKLLQEIAALQA
HCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCLGIPGQITEITDINHKLAIVDVGGVKRQVNIACIVDEQHPPEACLGDWVLVHVGFAMN
CCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
RINEQEAAETLKLLQEIAALQA
HCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]