| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is mrp [H]
Identifier: 17228148
GI number: 17228148
Start: 754691
End: 755761
Strand: Direct
Name: mrp [H]
Synonym: alr0652
Alternate gene names: 17228148
Gene position: 754691-755761 (Clockwise)
Preceding gene: 17228147
Following gene: 17228149
Centisome position: 11.77
GC content: 46.03
Gene sequence:
>1071_bases ATGTACGATGTCCTCGATTCACAATCTGTCTTAGAAGTGTTGCGACCAGTGCAAGACCCAGAACTGCGTAAGAGTCTGGT AGAACTGAATATGATTCGCAACGTCAAAATTGATGGGGGTCAAGTAAGCTTCACCTTAGTTTTGACTACGCCTGCTTGTC CATTGCGGGAATTTATTGTTGAAGATTGCCAAAGGGCTGTGAAAAAGCTACCTGGGGTAACAGATGTCAGTGTAGAAGTT ACAGCAGAAACACCCCAACAAAAAAGCTTGCCAGACCGCAATGGTGTTCCCGGTGTGAAAAATATTATCGCCATCTCTAG TGGTAAAGGTGGTGTCGGTAAAAGTACTGTGGCGGTAAATGTCGCCGTAGCTTTAGCGCAGACGGGGGCAAAAGTTGGCT TACTAGATGCGGATATCTACGGTCCCAATGATCCTACGATGTTAGGGCTGGGTGATGCCCAAATTGTCGTGCGTTCCACA GAAAAAGGCGAAGTATTGGAACCCGCTTTTAATCATGGTGTCAAATTGGTCTCGATGGGTTTTCTGATTGACCGGGATCA GCCTGTAATTTGGCGGGGGCCGATGCTGAATGGGGTAATTCGCCAGTTTCTCTATCAAGTAGAGTGGGGCGAGTTGGACT ATTTAATTGTGGATATGCCCCCAGGAACAGGAGATGCCCAGTTAACTTTAACTCAGGCTGTACCAATGTCTGGAGCAGTA ATTGTGACTACACCCCAAAACGTAGCCTTGTTAGATTCTCGTAAAGGTTTACGTATGTTCCAGCAAATGAACGTGGCTGT TTTGGGAATAGTAGAAAACATGAGCTACTTCATTCCCCCTGATATGCCAGATAAGCATTACGATATTTTTGGTTCCGGTG GCGGTTCCAAAACAGCAGCAGAATTAGGTGTACCCTTACTAGGCTGCATACCCTTGGAAATTTCCACTAGAATTGGCGGT GATAATGGTGTACCCATTGTTGTTGCTGACCCAGATTCAGCCTCTGCCAAGGCATTAAAAGCGATCGCTTTAACAATTGC TGGTAAAGTATCAGTCGCAGCCCTCACATAA
Upstream 100 bases:
>100_bases CAGCAGTTTCTGCTGATTGATTTTGCAGCTGGTCAAAAACCAGGTCGCATCTATCTCTAGCTTGCATTTTGAATTTTTAA TTTTGAGTTTTGAATTGTAT
Downstream 100 bases:
>100_bases TTAAAAGTTATGAAGGCTGTGTAGCACGTTAGTAAGTCTTAGGTGGTGAGTGTTGAGTCAATAGTTTTACTCAACACTCC AGGCTATTATTTTTAGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MYDVLDSQSVLEVLRPVQDPELRKSLVELNMIRNVKIDGGQVSFTLVLTTPACPLREFIVEDCQRAVKKLPGVTDVSVEV TAETPQQKSLPDRNGVPGVKNIIAISSGKGGVGKSTVAVNVAVALAQTGAKVGLLDADIYGPNDPTMLGLGDAQIVVRST EKGEVLEPAFNHGVKLVSMGFLIDRDQPVIWRGPMLNGVIRQFLYQVEWGELDYLIVDMPPGTGDAQLTLTQAVPMSGAV IVTTPQNVALLDSRKGLRMFQQMNVAVLGIVENMSYFIPPDMPDKHYDIFGSGGGSKTAAELGVPLLGCIPLEISTRIGG DNGVPIVVADPDSASAKALKAIALTIAGKVSVAALT
Sequences:
>Translated_356_residues MYDVLDSQSVLEVLRPVQDPELRKSLVELNMIRNVKIDGGQVSFTLVLTTPACPLREFIVEDCQRAVKKLPGVTDVSVEV TAETPQQKSLPDRNGVPGVKNIIAISSGKGGVGKSTVAVNVAVALAQTGAKVGLLDADIYGPNDPTMLGLGDAQIVVRST EKGEVLEPAFNHGVKLVSMGFLIDRDQPVIWRGPMLNGVIRQFLYQVEWGELDYLIVDMPPGTGDAQLTLTQAVPMSGAV IVTTPQNVALLDSRKGLRMFQQMNVAVLGIVENMSYFIPPDMPDKHYDIFGSGGGSKTAAELGVPLLGCIPLEISTRIGG DNGVPIVVADPDSASAKALKAIALTIAGKVSVAALT >Mature_356_residues MYDVLDSQSVLEVLRPVQDPELRKSLVELNMIRNVKIDGGQVSFTLVLTTPACPLREFIVEDCQRAVKKLPGVTDVSVEV TAETPQQKSLPDRNGVPGVKNIIAISSGKGGVGKSTVAVNVAVALAQTGAKVGLLDADIYGPNDPTMLGLGDAQIVVRST EKGEVLEPAFNHGVKLVSMGFLIDRDQPVIWRGPMLNGVIRQFLYQVEWGELDYLIVDMPPGTGDAQLTLTQAVPMSGAV IVTTPQNVALLDSRKGLRMFQQMNVAVLGIVENMSYFIPPDMPDKHYDIFGSGGGSKTAAELGVPLLGCIPLEISTRIGG DNGVPIVVADPDSASAKALKAIALTIAGKVSVAALT
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=286, Percent_Identity=44.0559440559441, Blast_Score=240, Evalue=1e-63, Organism=Homo sapiens, GI6912540, Length=258, Percent_Identity=42.2480620155039, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI118572611, Length=252, Percent_Identity=41.2698412698413, Blast_Score=173, Evalue=2e-43, Organism=Escherichia coli, GI87082045, Length=337, Percent_Identity=42.1364985163205, Blast_Score=256, Evalue=2e-69, Organism=Caenorhabditis elegans, GI25143050, Length=264, Percent_Identity=40.1515151515151, Blast_Score=175, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6322188, Length=230, Percent_Identity=41.304347826087, Blast_Score=177, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6321347, Length=254, Percent_Identity=37.007874015748, Blast_Score=151, Evalue=2e-37, Organism=Drosophila melanogaster, GI221511043, Length=262, Percent_Identity=38.9312977099237, Blast_Score=187, Evalue=9e-48, Organism=Drosophila melanogaster, GI24667611, Length=253, Percent_Identity=45.4545454545455, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI19921440, Length=266, Percent_Identity=39.0977443609023, Blast_Score=145, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 37692; Mature: 37692
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDVLDSQSVLEVLRPVQDPELRKSLVELNMIRNVKIDGGQVSFTLVLTTPACPLREFIV CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEEEECCCCHHHHHHH EDCQRAVKKLPGVTDVSVEVTAETPQQKSLPDRNGVPGVKNIIAISSGKGGVGKSTVAVN HHHHHHHHHCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEE VAVALAQTGAKVGLLDADIYGPNDPTMLGLGDAQIVVRSTEKGEVLEPAFNHGVKLVSMG EEEEEECCCCEEEEEEEECCCCCCCCEEECCCCEEEEEECCCCCEECHHHHCCEEEEEEE FLIDRDQPVIWRGPMLNGVIRQFLYQVEWGELDYLIVDMPPGTGDAQLTLTQAVPMSGAV EEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEE IVTTPQNVALLDSRKGLRMFQQMNVAVLGIVENMSYFIPPDMPDKHYDIFGSGGGSKTAA EEECCCCEEEEECCCHHHHHHHCCEEEEEEEECCCEECCCCCCCCCEEEEECCCCCCCHH ELGVPLLGCIPLEISTRIGGDNGVPIVVADPDSASAKALKAIALTIAGKVSVAALT HHCCCEEEEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHEEEEEEECCEEEEEEC >Mature Secondary Structure MYDVLDSQSVLEVLRPVQDPELRKSLVELNMIRNVKIDGGQVSFTLVLTTPACPLREFIV CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEEEECCCCHHHHHHH EDCQRAVKKLPGVTDVSVEVTAETPQQKSLPDRNGVPGVKNIIAISSGKGGVGKSTVAVN HHHHHHHHHCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEE VAVALAQTGAKVGLLDADIYGPNDPTMLGLGDAQIVVRSTEKGEVLEPAFNHGVKLVSMG EEEEEECCCCEEEEEEEECCCCCCCCEEECCCCEEEEEECCCCCEECHHHHCCEEEEEEE FLIDRDQPVIWRGPMLNGVIRQFLYQVEWGELDYLIVDMPPGTGDAQLTLTQAVPMSGAV EEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEE IVTTPQNVALLDSRKGLRMFQQMNVAVLGIVENMSYFIPPDMPDKHYDIFGSGGGSKTAA EEECCCCEEEEECCCHHHHHHHCCEEEEEEEECCCEECCCCCCCCCEEEEECCCCCCCHH ELGVPLLGCIPLEISTRIGGDNGVPIVVADPDSASAKALKAIALTIAGKVSVAALT HHCCCEEEEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHEEEEEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]