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The map label for this gene is nrtA

Identifier: 17228104

GI number: 17228104

Start: 706423

End: 707745

Strand: Direct

Name: nrtA

Synonym: alr0608

Alternate gene names: 17228104

Gene position: 706423-707745 (Clockwise)

Preceding gene: 17228103

Following gene: 17228105

Centisome position: 11.01

GC content: 42.78

Gene sequence:

>1323_bases
ATGACACACGTTTCCAGAAGAAAATTTCTTTTCACCACAGGCGCGGCGGCGGCGGCTTCTATTTTGGTACATGGCTGTAC
TTCCAATGGTTCTCAATCAGCTACCACAGGAGAACAAGCGCCTTCAGCAGCACCAGCCGCTAATGTCTCAGCCGCTAACG
CACCCAAGGTAGAAACGACTAAAGCCAAGTTAGGATTTATCCCTCTTACTGATGCGGCGCCCCTCATCATTGCTAAAGAA
AAGGGCTTCTTTGCTAAATATGGCATGACAGATATCGAAGTCATCAAGCAAAAATCTTGGCCTGTCACCCGCGATAACTT
AAAAATTGGCTCATCTGGTGGTGGCATCGATGGCGCACATATCCTTAGTCCCATGCCTTACCTCATGACCATCAATGATA
AAGTGCCAATGTATATTTTGGCTAGGTTAAACACTAATGGTCAGGCTATTTCTGTGGCGGAGAAATTTAAAGAACTTAAT
GTCAACCTAGAAAGTAAATCCCTTAAAGACGCAGCGATTAAAGCCAAAGCTGACAAGAAAGCCTTGAAAATGGGTATTAC
CTTTCCCGGTGGTACACACGATTTGTGGATGCGCTATTGGTTAGCGGCTGGTGGTATTAATCCTGATCAAGATGTGGTTT
TGGAAGCTGTACCACCACCGCAAATGGTGGCAAATATGAAAGTCAATACTGTTGATGGTTTCTGTGTAGGAGAACCTTGG
AATGCTCAGTTGGTCAACCAAAAAATAGGTTATTCTGCTCTAGTTACAGGCGAATTGTGGAAAGATCATCCAGAAAAAGC
CTTTAGTATGCGGCAAGATTGGATTGAGCAAAATCCCAATGCAGCCCAGGCAATTTTGATGGCAATCTTGGAAGCACAAC
AATGGTGCGACAAGGCAGAAAACAAAGAAGAAATGTGTAAAATCTGCTCTGATCGTAAATACTTTAATGTTGCTGCCGCA
GATATTATCGAGAGAGCTAAAGGCAATATCGATTATGGTGATGGTCGTAAGGAGCAAAACTTCGCCCATCGGATGAAATT
CTGGGCAGATAATGCTTCCTATCCTTATAAGAGTCACGATATTTGGTTTTTAACTGAAGATATTCGCTGGGGTTATTTAC
CAAAAGATACCAAAGTTCAAGACATTGTTAATCAAGTCAATAAAGAAGACTTGTGGAAAAAAGCGGCGAAAGCGATTGGT
GTGGCTGATGCGGAAATTCCTGCTAGCAGTTCCCGTGGGGTGGAAACTTTCTTTGATGGCGTGAAATTCGACCCAGAAAA
GCCAGAAGAATACTTAAATAGTTTGAAAATCAAAAAAGTCTAA

Upstream 100 bases:

>100_bases
ATTCAAAAAAAGAGTGGGGTAGTGAGCATGGGGAAGAAAATTGACTATTGACTGTTGACTAATGACAACTGACAACTGAC
GAATTAACAACATACAAAAA

Downstream 100 bases:

>100_bases
TTGGGCTGTAATGGCTTCTTGAAAAATAACTAAAATGCCACGGGAGAAAGTAAAAAATGACTGCTGTTTTAGGGAATCGC
GCTAGGGTAAGGAAATCTCA

Product: nitrate transport nitrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MTHVSRRKFLFTTGAAAAASILVHGCTSNGSQSATTGEQAPSAAPAANVSAANAPKVETTKAKLGFIPLTDAAPLIIAKE
KGFFAKYGMTDIEVIKQKSWPVTRDNLKIGSSGGGIDGAHILSPMPYLMTINDKVPMYILARLNTNGQAISVAEKFKELN
VNLESKSLKDAAIKAKADKKALKMGITFPGGTHDLWMRYWLAAGGINPDQDVVLEAVPPPQMVANMKVNTVDGFCVGEPW
NAQLVNQKIGYSALVTGELWKDHPEKAFSMRQDWIEQNPNAAQAILMAILEAQQWCDKAENKEEMCKICSDRKYFNVAAA
DIIERAKGNIDYGDGRKEQNFAHRMKFWADNASYPYKSHDIWFLTEDIRWGYLPKDTKVQDIVNQVNKEDLWKKAAKAIG
VADAEIPASSSRGVETFFDGVKFDPEKPEEYLNSLKIKKV

Sequences:

>Translated_440_residues
MTHVSRRKFLFTTGAAAAASILVHGCTSNGSQSATTGEQAPSAAPAANVSAANAPKVETTKAKLGFIPLTDAAPLIIAKE
KGFFAKYGMTDIEVIKQKSWPVTRDNLKIGSSGGGIDGAHILSPMPYLMTINDKVPMYILARLNTNGQAISVAEKFKELN
VNLESKSLKDAAIKAKADKKALKMGITFPGGTHDLWMRYWLAAGGINPDQDVVLEAVPPPQMVANMKVNTVDGFCVGEPW
NAQLVNQKIGYSALVTGELWKDHPEKAFSMRQDWIEQNPNAAQAILMAILEAQQWCDKAENKEEMCKICSDRKYFNVAAA
DIIERAKGNIDYGDGRKEQNFAHRMKFWADNASYPYKSHDIWFLTEDIRWGYLPKDTKVQDIVNQVNKEDLWKKAAKAIG
VADAEIPASSSRGVETFFDGVKFDPEKPEEYLNSLKIKKV
>Mature_439_residues
THVSRRKFLFTTGAAAAASILVHGCTSNGSQSATTGEQAPSAAPAANVSAANAPKVETTKAKLGFIPLTDAAPLIIAKEK
GFFAKYGMTDIEVIKQKSWPVTRDNLKIGSSGGGIDGAHILSPMPYLMTINDKVPMYILARLNTNGQAISVAEKFKELNV
NLESKSLKDAAIKAKADKKALKMGITFPGGTHDLWMRYWLAAGGINPDQDVVLEAVPPPQMVANMKVNTVDGFCVGEPWN
AQLVNQKIGYSALVTGELWKDHPEKAFSMRQDWIEQNPNAAQAILMAILEAQQWCDKAENKEEMCKICSDRKYFNVAAAD
IIERAKGNIDYGDGRKEQNFAHRMKFWADNASYPYKSHDIWFLTEDIRWGYLPKDTKVQDIVNQVNKEDLWKKAAKAIGV
ADAEIPASSSRGVETFFDGVKFDPEKPEEYLNSLKIKKV

Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRTA_NOSS1 (Q44292)

Other databases:

- EMBL:   X99709
- EMBL:   BA000019
- EMBL:   U61496
- PIR:   AG1882
- RefSeq:   NP_484652.1
- ProteinModelPortal:   Q44292
- STRING:   Q44292
- GeneID:   1104204
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr0608
- NMPDR:   fig|103690.1.peg.919
- eggNOG:   COG0715
- HOGENOM:   HBG544422
- OMA:   AAMTFPG
- ProtClustDB:   CLSK2753326
- BioCyc:   NSP103690:ALR0608-MONOMER
- GO:   GO:0006810
- InterPro:   IPR006311
- TIGRFAMs:   TIGR01409

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48476; Mature: 48345

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS51318 TAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHVSRRKFLFTTGAAAAASILVHGCTSNGSQSATTGEQAPSAAPAANVSAANAPKVETT
CCCCCCCEEEEECCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
KAKLGFIPLTDAAPLIIAKEKGFFAKYGMTDIEVIKQKSWPVTRDNLKIGSSGGGIDGAH
CCEECEEECCCCCCEEEEECCCCEEECCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCHH
ILSPMPYLMTINDKVPMYILARLNTNGQAISVAEKFKELNVNLESKSLKDAAIKAKADKK
HHCCCCEEEEECCCCCEEEEEEECCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCHH
ALKMGITFPGGTHDLWMRYWLAAGGINPDQDVVLEAVPPPQMVANMKVNTVDGFCVGEPW
HHEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCEEECCCCEEECCCC
NAQLVNQKIGYSALVTGELWKDHPEKAFSMRQDWIEQNPNAAQAILMAILEAQQWCDKAE
CHHHHHHCCCCEEEEECHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
NKEEMCKICSDRKYFNVAAADIIERAKGNIDYGDGRKEQNFAHRMKFWADNASYPYKSHD
CHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
IWFLTEDIRWGYLPKDTKVQDIVNQVNKEDLWKKAAKAIGVADAEIPASSSRGVETFFDG
EEEEEECCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCC
VKFDPEKPEEYLNSLKIKKV
CCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
THVSRRKFLFTTGAAAAASILVHGCTSNGSQSATTGEQAPSAAPAANVSAANAPKVETT
CCCCCCEEEEECCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
KAKLGFIPLTDAAPLIIAKEKGFFAKYGMTDIEVIKQKSWPVTRDNLKIGSSGGGIDGAH
CCEECEEECCCCCCEEEEECCCCEEECCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCHH
ILSPMPYLMTINDKVPMYILARLNTNGQAISVAEKFKELNVNLESKSLKDAAIKAKADKK
HHCCCCEEEEECCCCCEEEEEEECCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCHH
ALKMGITFPGGTHDLWMRYWLAAGGINPDQDVVLEAVPPPQMVANMKVNTVDGFCVGEPW
HHEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCEEECCCCEEECCCC
NAQLVNQKIGYSALVTGELWKDHPEKAFSMRQDWIEQNPNAAQAILMAILEAQQWCDKAE
CHHHHHHCCCCEEEEECHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
NKEEMCKICSDRKYFNVAAADIIERAKGNIDYGDGRKEQNFAHRMKFWADNASYPYKSHD
CHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
IWFLTEDIRWGYLPKDTKVQDIVNQVNKEDLWKKAAKAIGVADAEIPASSSRGVETFFDG
EEEEEECCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCC
VKFDPEKPEEYLNSLKIKKV
CCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8990301; 11759840; 8982006