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The map label for this gene is 17228050

Identifier: 17228050

GI number: 17228050

Start: 645924

End: 646316

Strand: Direct

Name: 17228050

Synonym: alr0554

Alternate gene names: NA

Gene position: 645924-646316 (Clockwise)

Preceding gene: 17228049

Following gene: 17228051

Centisome position: 10.07

GC content: 40.46

Gene sequence:

>393_bases
ATGGCTAGTTCAGGTGAAGACTACATAACTACTCGTCAAAAGCAGATTGCAAGGAAAAAAAGGATTTTAACGATAATTTC
TTTTGTGGGTTTCGTTGGTTCGTCAGTTTTTGCAATTGTTCCAGCTATTCAACGGGCGACCCAAAATCCGCAGCCAGTAA
CTCCAACTGTATCTGCTGAGTCTTCATTGCAAGAAGAAGCCAAGGGTTATGAATTAGTTTTACAGCGAGAACCAAATAAT
CAAACAGCATTGGAGAAGTTGTCTATCATCCGGTTACGTTTGAAGGATAAAAAGGGAGCGATCGCGCTGATGGAGAAGTT
AGTACAGCAGCATCCTGCTCGACAAGATTATAAAACTGTGTTGGCAGATATGAAGAAGAAAAATGTTCAGTAA

Upstream 100 bases:

>100_bases
AAAAATTTTTAGTTGAGATGTTAGTTTCTGTGAGGTAATGGGTAATCTCTTATTTAGGAGATTACTGTAACTAAGTATTT
ACCACAGTCCGGATGCAAAC

Downstream 100 bases:

>100_bases
GTAATTGCTAAGTAGTAACTATCTATGTTGAATCATCATAATGATATCTAGCTTAATTATTCAAATTAAAGGTGTAAAGA
TATGGGAAATGATGATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MASSGEDYITTRQKQIARKKRILTIISFVGFVGSSVFAIVPAIQRATQNPQPVTPTVSAESSLQEEAKGYELVLQREPNN
QTALEKLSIIRLRLKDKKGAIALMEKLVQQHPARQDYKTVLADMKKKNVQ

Sequences:

>Translated_130_residues
MASSGEDYITTRQKQIARKKRILTIISFVGFVGSSVFAIVPAIQRATQNPQPVTPTVSAESSLQEEAKGYELVLQREPNN
QTALEKLSIIRLRLKDKKGAIALMEKLVQQHPARQDYKTVLADMKKKNVQ
>Mature_129_residues
ASSGEDYITTRQKQIARKKRILTIISFVGFVGSSVFAIVPAIQRATQNPQPVTPTVSAESSLQEEAKGYELVLQREPNNQ
TALEKLSIIRLRLKDKKGAIALMEKLVQQHPARQDYKTVLADMKKKNVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14564; Mature: 14433

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSGEDYITTRQKQIARKKRILTIISFVGFVGSSVFAIVPAIQRATQNPQPVTPTVSAE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
SSLQEEAKGYELVLQREPNNQTALEKLSIIRLRLKDKKGAIALMEKLVQQHPARQDYKTV
HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHH
LADMKKKNVQ
HHHHHHHCCC
>Mature Secondary Structure 
ASSGEDYITTRQKQIARKKRILTIISFVGFVGSSVFAIVPAIQRATQNPQPVTPTVSAE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
SSLQEEAKGYELVLQREPNNQTALEKLSIIRLRLKDKKGAIALMEKLVQQHPARQDYKTV
HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHH
LADMKKKNVQ
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA