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The map label for this gene is 17227980

Identifier: 17227980

GI number: 17227980

Start: 579200

End: 580126

Strand: Direct

Name: 17227980

Synonym: alr0484

Alternate gene names: NA

Gene position: 579200-580126 (Clockwise)

Preceding gene: 17227979

Following gene: 17227981

Centisome position: 9.03

GC content: 41.42

Gene sequence:

>927_bases
ATGGACTTACTGCGATCGCTACCCTTAGGATTATACTTAGAACAACCACAAACTTGGCTACATAAATTAGACCCGCGAGT
CAAGTTTATTTGGTTAATGAGTTTCCTTACCAGCTATAGTTTTGCTAATAACCTCTGGCGGATACTACTGGTAGCATTAT
TAATCCTTTTTACTCTCATTGCCAGAATACCTCGGCGAGTGTGGCAACAACAGATGGGCTGGTTGTTAACATTATCATTT
TTTGTGTTGGCGATCGCGGCCATTAGTCCTGATGGATTGGGTGTAGACTATCAATCACGTTTACCAACTAACCCACAAGT
TTTAACCCAGTCAGCCAATACAAATAATTCTGCCACAGCCACAGAACAATTAAAGAGCAGTAAAAGCTATACTTACGTAC
TGTTTCACAAAGGCCCGGTGAAAGTAACTCGCCGTTCTTTAGATTTAGCGGTACGCATAAGTACAATTATATTCACTGTT
ATTTACAGCACCAATTTATATCTTTTGACAACTGCACCAGAGGAAATTACAGCTGGCGTAGAAAGCCTCATGCAGCCTCT
ACGACGGTTTAAAATACCTGTAACCGAAATTACCTTGACTTTAACTTTATCCTTGCGTTTTATTCCCTTAGTCTTAGAAG
AAGTGCAGAATTTAGTCCGTTCTGTCATGACTAGGGCGATTAACTGGAAAAAACTGGGCTTAAAAGGCGCGGTCAAAGTT
TGGATGATTGTCGCCGAGAGACTATTAGAAAATTTGCTATTAAGGGCATCACAAATGGCCAGTGCCATGATGGTACGCGG
TTTTACCAGTCCCAACGAACATCGAGTCCCCTGGCACGACCTACGCTTAAAATTACGGGATTGGTTAGCGATCGCCTCTT
TGACTATATTCTGGGGAATAAGAGTAGTCTTTGGCAATCAAATTTAA

Upstream 100 bases:

>100_bases
GATGAGCTTAATAGTCATTGGTCGTTAGTGTTTAGCTATGAACTGTTGACTATTGACTATGGATTATTGATTATGGACTA
TTGACTATGGACTATTGACT

Downstream 100 bases:

>100_bases
TAGCTATATGAACTTACAAGCTAGAAGAAGCAGGAGAGCAATTGCCCCAGAACAGAGGAAAGAACTCATGACAACTGACA
ACTAAACTAATGACCAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MDLLRSLPLGLYLEQPQTWLHKLDPRVKFIWLMSFLTSYSFANNLWRILLVALLILFTLIARIPRRVWQQQMGWLLTLSF
FVLAIAAISPDGLGVDYQSRLPTNPQVLTQSANTNNSATATEQLKSSKSYTYVLFHKGPVKVTRRSLDLAVRISTIIFTV
IYSTNLYLLTTAPEEITAGVESLMQPLRRFKIPVTEITLTLTLSLRFIPLVLEEVQNLVRSVMTRAINWKKLGLKGAVKV
WMIVAERLLENLLLRASQMASAMMVRGFTSPNEHRVPWHDLRLKLRDWLAIASLTIFWGIRVVFGNQI

Sequences:

>Translated_308_residues
MDLLRSLPLGLYLEQPQTWLHKLDPRVKFIWLMSFLTSYSFANNLWRILLVALLILFTLIARIPRRVWQQQMGWLLTLSF
FVLAIAAISPDGLGVDYQSRLPTNPQVLTQSANTNNSATATEQLKSSKSYTYVLFHKGPVKVTRRSLDLAVRISTIIFTV
IYSTNLYLLTTAPEEITAGVESLMQPLRRFKIPVTEITLTLTLSLRFIPLVLEEVQNLVRSVMTRAINWKKLGLKGAVKV
WMIVAERLLENLLLRASQMASAMMVRGFTSPNEHRVPWHDLRLKLRDWLAIASLTIFWGIRVVFGNQI
>Mature_308_residues
MDLLRSLPLGLYLEQPQTWLHKLDPRVKFIWLMSFLTSYSFANNLWRILLVALLILFTLIARIPRRVWQQQMGWLLTLSF
FVLAIAAISPDGLGVDYQSRLPTNPQVLTQSANTNNSATATEQLKSSKSYTYVLFHKGPVKVTRRSLDLAVRISTIIFTV
IYSTNLYLLTTAPEEITAGVESLMQPLRRFKIPVTEITLTLTLSLRFIPLVLEEVQNLVRSVMTRAINWKKLGLKGAVKV
WMIVAERLLENLLLRASQMASAMMVRGFTSPNEHRVPWHDLRLKLRDWLAIASLTIFWGIRVVFGNQI

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf92 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YC92L_NOSS1 (Q8YZH6)

Other databases:

- EMBL:   BA000019
- PIR:   AC1867
- RefSeq:   NP_484528.1
- STRING:   Q8YZH6
- GeneID:   1104080
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr0484
- NMPDR:   fig|103690.1.peg.795
- eggNOG:   COG0619
- HOGENOM:   HBG635170
- OMA:   FTVIHSV
- ProtClustDB:   CLSK893166
- BioCyc:   NSP103690:ALR0484-MONOMER
- InterPro:   IPR003339

Pfam domain/function: PF02361 CbiQ

EC number: NA

Molecular weight: Translated: 35291; Mature: 35291

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb29ce20)-; HASH(0xd9e5658)-; HASH(0xd261fc4)-; HASH(0xc4fbc3c)-; HASH(0xd5a816c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLRSLPLGLYLEQPQTWLHKLDPRVKFIWLMSFLTSYSFANNLWRILLVALLILFTLI
CCCHHHCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARIPRRVWQQQMGWLLTLSFFVLAIAAISPDGLGVDYQSRLPTNPQVLTQSANTNNSATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHEEECCCCCCCHHH
TEQLKSSKSYTYVLFHKGPVKVTRRSLDLAVRISTIIFTVIYSTNLYLLTTAPEEITAGV
HHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHH
ESLMQPLRRFKIPVTEITLTLTLSLRFIPLVLEEVQNLVRSVMTRAINWKKLGLKGAVKV
HHHHHHHHHHCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHH
WMIVAERLLENLLLRASQMASAMMVRGFTSPNEHRVPWHDLRLKLRDWLAIASLTIFWGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RVVFGNQI
HHEECCCH
>Mature Secondary Structure
MDLLRSLPLGLYLEQPQTWLHKLDPRVKFIWLMSFLTSYSFANNLWRILLVALLILFTLI
CCCHHHCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARIPRRVWQQQMGWLLTLSFFVLAIAAISPDGLGVDYQSRLPTNPQVLTQSANTNNSATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHEEECCCCCCCHHH
TEQLKSSKSYTYVLFHKGPVKVTRRSLDLAVRISTIIFTVIYSTNLYLLTTAPEEITAGV
HHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHH
ESLMQPLRRFKIPVTEITLTLTLSLRFIPLVLEEVQNLVRSVMTRAINWKKLGLKGAVKV
HHHHHHHHHHCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHH
WMIVAERLLENLLLRASQMASAMMVRGFTSPNEHRVPWHDLRLKLRDWLAIASLTIFWGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RVVFGNQI
HHEECCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840