| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is ybhG [C]
Identifier: 17227947
GI number: 17227947
Start: 532806
End: 534275
Strand: Direct
Name: ybhG [C]
Synonym: alr0451
Alternate gene names: 17227947
Gene position: 532806-534275 (Clockwise)
Preceding gene: 17227943
Following gene: 17227948
Centisome position: 8.31
GC content: 47.89
Gene sequence:
>1470_bases ATGACTGCGTACATAGAAGTTCCGATGATTGGTAAAGTTAAATATCCGGCGCGCTGGCTGGTGGGACTAGCAGCTATTGG TGTTTTAGTAGTTGGCTCGACCACAACCTACAAGATAGTCCAACAGGGAAATAGTAAGCAAGATGTAACGCAACTAACGG TTCCGGTAGAATCCAAGAATGTGACTATCAGAATTACCGCCAGTGGTAAAGTTGTGCCGGTGCAGAGTGTGAATCTTAGC CCAAAAAACCCTGGTGTGCTGGCGCAGTTATATGTAGAACAAGGCGATCGCGTGGAGCAGGGACAGATCATTGCCCGGAT GGATGTAGGTGAGATCGAAGCACAAATTGCTCAACATCGTGCCAATGTAGCCCAAGCCCAAGCCCAGTTAGATGAAGCTA GGGCGGGGAATCGTCCTCAAGAAATTGCTCAGTCTCAAGCGCGTCTAGCCCAAGCCCAAGCTCAATTAGCTGAGTCGGTG GCGGGGAATCGTCCCCAAGAAGTTGCTAAAGCCCAATCTCAAGTTGATGCAGCCCAAGCCAGGGTAAATTACACATCGGA ACAGGTAAAACGTTATCAATATCTCTTTAACCAAGGGGCAGAGAGAAAACAATTATTTGATCAAGCCGTCAGTGAAGACA AAAGTGCTAGAGCTAATTTAGCAGAAGCACAAAAGCAATTATCCCTATTGCAAAGTGGGACGCGGAGTGAGGTGATCTCT GCAAAGGAAGCTGCTGTCACCGAAGCACGGGCAGCATTAGTACTTTCACAAGAAGGTAGCCGCCCCGAAGAAATTGCCCA ACGTCAAGCAGCTGTGAAAGCAGCCCAAGCACAGCTAGCAGCCGCCCAAGTTAGATTAGCAGATACAATTATTCGCGCCC CCTTCTCTGGCATAGTGACTCAGAAGTACGCCAACGTGGGTGCTTTCGTCACTCCTACAACCTCCGCTTCCACTAGTGCT TCTGCAACTTCTAGTTCCATTGTGGCGTTAGCCAGGGGTGTAGAAATCTTGGCGCAGGTTCCAGAAGCTGACATTGGACG CATTAAACAAGGGCAACAAGTAGAAATTGTGGCAGATGCCTATCCTGACGAAGTTTTTCAAGGGCGTGTACGTTTAATTG CCCCGGAGGCGGTCATAGAACAGGGTGTGACATCCTTTCAAGTGCGGGTAGCTATTGATACGGGAGTAGATAAACTACGG TCTGGCTTAAATGTAGATTTAACTTTCTTGGGCGATCGCGTCAATAATGCTCTGGTATTACCGACAGTTTCCATCGTCAC GGAAGACGGGAAAACAGGTGTCTTAGTACCAGATGGCCAAAATAAACCCCAGTTTCGAGAAGTGACCATTGGCGCACAAA TCCAAGACCAAACTCAAGTTTTATCTGGCTTGAAAACAGGCGATCGCGTGTTTGTTGACTTACCCCAAGATTACAGAATC CAACAGGCCAAAGAAAAAGCAAATCAATGA
Upstream 100 bases:
>100_bases TCACGTCCAAATACTGAATTTAAATAAATATTTACTTCTATATTTCTGAAACTCTTTATTTCTGACCACCCCCCGAAACA AGGTTAATAGGCCGCTACTT
Downstream 100 bases:
>100_bases ACTTCTTAGAAAGTATGCAAATGGCAGGGAAAACCCTGCTGTCCAATAAGCTGCGTAGCGCCCTAACTATGTTGGGCATT GTTATTGGTAATGCCTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MTAYIEVPMIGKVKYPARWLVGLAAIGVLVVGSTTTYKIVQQGNSKQDVTQLTVPVESKNVTIRITASGKVVPVQSVNLS PKNPGVLAQLYVEQGDRVEQGQIIARMDVGEIEAQIAQHRANVAQAQAQLDEARAGNRPQEIAQSQARLAQAQAQLAESV AGNRPQEVAKAQSQVDAAQARVNYTSEQVKRYQYLFNQGAERKQLFDQAVSEDKSARANLAEAQKQLSLLQSGTRSEVIS AKEAAVTEARAALVLSQEGSRPEEIAQRQAAVKAAQAQLAAAQVRLADTIIRAPFSGIVTQKYANVGAFVTPTTSASTSA SATSSSIVALARGVEILAQVPEADIGRIKQGQQVEIVADAYPDEVFQGRVRLIAPEAVIEQGVTSFQVRVAIDTGVDKLR SGLNVDLTFLGDRVNNALVLPTVSIVTEDGKTGVLVPDGQNKPQFREVTIGAQIQDQTQVLSGLKTGDRVFVDLPQDYRI QQAKEKANQ
Sequences:
>Translated_489_residues MTAYIEVPMIGKVKYPARWLVGLAAIGVLVVGSTTTYKIVQQGNSKQDVTQLTVPVESKNVTIRITASGKVVPVQSVNLS PKNPGVLAQLYVEQGDRVEQGQIIARMDVGEIEAQIAQHRANVAQAQAQLDEARAGNRPQEIAQSQARLAQAQAQLAESV AGNRPQEVAKAQSQVDAAQARVNYTSEQVKRYQYLFNQGAERKQLFDQAVSEDKSARANLAEAQKQLSLLQSGTRSEVIS AKEAAVTEARAALVLSQEGSRPEEIAQRQAAVKAAQAQLAAAQVRLADTIIRAPFSGIVTQKYANVGAFVTPTTSASTSA SATSSSIVALARGVEILAQVPEADIGRIKQGQQVEIVADAYPDEVFQGRVRLIAPEAVIEQGVTSFQVRVAIDTGVDKLR SGLNVDLTFLGDRVNNALVLPTVSIVTEDGKTGVLVPDGQNKPQFREVTIGAQIQDQTQVLSGLKTGDRVFVDLPQDYRI QQAKEKANQ >Mature_488_residues TAYIEVPMIGKVKYPARWLVGLAAIGVLVVGSTTTYKIVQQGNSKQDVTQLTVPVESKNVTIRITASGKVVPVQSVNLSP KNPGVLAQLYVEQGDRVEQGQIIARMDVGEIEAQIAQHRANVAQAQAQLDEARAGNRPQEIAQSQARLAQAQAQLAESVA GNRPQEVAKAQSQVDAAQARVNYTSEQVKRYQYLFNQGAERKQLFDQAVSEDKSARANLAEAQKQLSLLQSGTRSEVISA KEAAVTEARAALVLSQEGSRPEEIAQRQAAVKAAQAQLAAAQVRLADTIIRAPFSGIVTQKYANVGAFVTPTTSASTSAS ATSSSIVALARGVEILAQVPEADIGRIKQGQQVEIVADAYPDEVFQGRVRLIAPEAVIEQGVTSFQVRVAIDTGVDKLRS GLNVDLTFLGDRVNNALVLPTVSIVTEDGKTGVLVPDGQNKPQFREVTIGAQIQDQTQVLSGLKTGDRVFVDLPQDYRIQ QAKEKANQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=350, Percent_Identity=26.5714285714286, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI87082036, Length=262, Percent_Identity=25.5725190839695, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 52449; Mature: 52318
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAYIEVPMIGKVKYPARWLVGLAAIGVLVVGSTTTYKIVQQGNSKQDVTQLTVPVESKN CCEEEECCCCCCCCCCHHHHHHHHHHHHEEECCCCEEEHEECCCCCCCCEEEEEEEECCC VTIRITASGKVVPVQSVNLSPKNPGVLAQLYVEQGDRVEQGQIIARMDVGEIEAQIAQHR EEEEEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHH ANVAQAQAQLDEARAGNRPQEIAQSQARLAQAQAQLAESVAGNRPQEVAKAQSQVDAAQA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RVNYTSEQVKRYQYLFNQGAERKQLFDQAVSEDKSARANLAEAQKQLSLLQSGTRSEVIS HHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH AKEAAVTEARAALVLSQEGSRPEEIAQRQAAVKAAQAQLAAAQVRLADTIIRAPFSGIVT HHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH QKYANVGAFVTPTTSASTSASATSSSIVALARGVEILAQVPEADIGRIKQGQQVEIVADA HHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECC YPDEVFQGRVRLIAPEAVIEQGVTSFQVRVAIDTGVDKLRSGLNVDLTFLGDRVNNALVL CCCHHHCCCEEEECHHHHHHCCCCEEEEEEEEECCHHHHHCCCCEEEEEECCCCCCEEEE PTVSIVTEDGKTGVLVPDGQNKPQFREVTIGAQIQDQTQVLSGLKTGDRVFVDLPQDYRI EEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCHHH QQAKEKANQ HHHHHHCCC >Mature Secondary Structure TAYIEVPMIGKVKYPARWLVGLAAIGVLVVGSTTTYKIVQQGNSKQDVTQLTVPVESKN CEEEECCCCCCCCCCHHHHHHHHHHHHEEECCCCEEEHEECCCCCCCCEEEEEEEECCC VTIRITASGKVVPVQSVNLSPKNPGVLAQLYVEQGDRVEQGQIIARMDVGEIEAQIAQHR EEEEEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHH ANVAQAQAQLDEARAGNRPQEIAQSQARLAQAQAQLAESVAGNRPQEVAKAQSQVDAAQA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RVNYTSEQVKRYQYLFNQGAERKQLFDQAVSEDKSARANLAEAQKQLSLLQSGTRSEVIS HHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH AKEAAVTEARAALVLSQEGSRPEEIAQRQAAVKAAQAQLAAAQVRLADTIIRAPFSGIVT HHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH QKYANVGAFVTPTTSASTSASATSSSIVALARGVEILAQVPEADIGRIKQGQQVEIVADA HHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECC YPDEVFQGRVRLIAPEAVIEQGVTSFQVRVAIDTGVDKLRSGLNVDLTFLGDRVNNALVL CCCHHHCCCEEEECHHHHHHCCCCEEEEEEEEECCHHHHHCCCCEEEEEECCCCCCEEEE PTVSIVTEDGKTGVLVPDGQNKPQFREVTIGAQIQDQTQVLSGLKTGDRVFVDLPQDYRI EEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCHHH QQAKEKANQ HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA