| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17227732
Identifier: 17227732
GI number: 17227732
Start: 252979
End: 254037
Strand: Direct
Name: 17227732
Synonym: alr0236
Alternate gene names: NA
Gene position: 252979-254037 (Clockwise)
Preceding gene: 17227731
Following gene: 17227733
Centisome position: 3.94
GC content: 42.68
Gene sequence:
>1059_bases ATGCCAGACAAACCACCCGCAAACATAGAAAAAAATACTAAACCATCTGTAATAGATGCTGTTGCTCAAATTGGGAAAGC AACGGTTAAGCAGACACAAAATTTATTTGAGCAAGGTACTCAAATAACGGGTAACGTCATCAACCATATTAGTGAGAATT GGTTGATTAGAAGAATTTCAGGATTTTTGAATCTTAATTGGCTAATTGGGGCAAGTGACAACGTAGACATAGAAAAAGTT GCTACCTCAGTTAACAAACTCAAACAAAAGTATCCCCAGGAATCACCAAGCCAAATTGCCCACCGCATCATGATGGACAA AGCAGCTAAATCTGGTGGAGTAGGTCTAGCGAGTAGCATTTTACCTGGAGTAGCCGCCGCCTTATTTGCAGTGGATTTAG CTGCAACAATGAAATTGCAGACAGAAATGCTTTATCAGATTGCTGCTGCTTACGGACTTGATTTGAAAGATCCTGCTCGA AAAGGGGAGCTTTTGACAATTTTTGGTTTAGGACTGGGTGGAAATCGCCTCCTGAAAGCAGCCGGATTAGCCCTACTACG TAATATACCCTTTGCTGGTGCGGCGATCGCTGCCAGTTCCAATGCCACACTCAGCTATTCTTTAGGATATGCAGCTTGTC GATTTTACGAAGCCAAGTTAGACGCTGCAACATCCATCAATTCTCCAGAAACATTGTCAAACTTAAAAGCCGAGAGCGAG AAATATTTAGAAAAAGCGATCGCTCAAGAAGCCATCATGGATCAGATATTAGTTCACATGATCCTCGCCAGCCATCCAGA GAAAACTTGGGAAGAAATCTTACCAGACTTGCAAGTTGCCAACCTCAGCCCCACATCCTTAGCAGCCATCAAGCAAAATA TCAAATCACCCCAACCATTCGAGCAACTGCTGAACCAGTTAAATCGTGATTTTGCCGTCCCCTTACTAGCTCGTTGTCGC AAAATTGCCGAACTAGACCATCAGAGTGAACCAAGAGAGCTAGAAATAATCAATGCGATCGCCAAGAAATTTGATATTAG TCACGAATTAGGGGTGTAA
Upstream 100 bases:
>100_bases ACCCTAGAGATACAGAGAATTGTCCTGGTTGATAGATGTCAAGGCTTGCAATTATCGACTAAAACCAAAACAGAGGGTCT GATAAGGATGATGACAAGCA
Downstream 100 bases:
>100_bases GGGTGTAGGGAATCCCATCAATAGTAATTAATTCTTCCCCTTGATCCTTGTTTTTCTGATTCCTTATCTCTTCCTAATCC CCATTACCCCTTATCCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MPDKPPANIEKNTKPSVIDAVAQIGKATVKQTQNLFEQGTQITGNVINHISENWLIRRISGFLNLNWLIGASDNVDIEKV ATSVNKLKQKYPQESPSQIAHRIMMDKAAKSGGVGLASSILPGVAAALFAVDLAATMKLQTEMLYQIAAAYGLDLKDPAR KGELLTIFGLGLGGNRLLKAAGLALLRNIPFAGAAIAASSNATLSYSLGYAACRFYEAKLDAATSINSPETLSNLKAESE KYLEKAIAQEAIMDQILVHMILASHPEKTWEEILPDLQVANLSPTSLAAIKQNIKSPQPFEQLLNQLNRDFAVPLLARCR KIAELDHQSEPRELEIINAIAKKFDISHELGV
Sequences:
>Translated_352_residues MPDKPPANIEKNTKPSVIDAVAQIGKATVKQTQNLFEQGTQITGNVINHISENWLIRRISGFLNLNWLIGASDNVDIEKV ATSVNKLKQKYPQESPSQIAHRIMMDKAAKSGGVGLASSILPGVAAALFAVDLAATMKLQTEMLYQIAAAYGLDLKDPAR KGELLTIFGLGLGGNRLLKAAGLALLRNIPFAGAAIAASSNATLSYSLGYAACRFYEAKLDAATSINSPETLSNLKAESE KYLEKAIAQEAIMDQILVHMILASHPEKTWEEILPDLQVANLSPTSLAAIKQNIKSPQPFEQLLNQLNRDFAVPLLARCR KIAELDHQSEPRELEIINAIAKKFDISHELGV >Mature_351_residues PDKPPANIEKNTKPSVIDAVAQIGKATVKQTQNLFEQGTQITGNVINHISENWLIRRISGFLNLNWLIGASDNVDIEKVA TSVNKLKQKYPQESPSQIAHRIMMDKAAKSGGVGLASSILPGVAAALFAVDLAATMKLQTEMLYQIAAAYGLDLKDPARK GELLTIFGLGLGGNRLLKAAGLALLRNIPFAGAAIAASSNATLSYSLGYAACRFYEAKLDAATSINSPETLSNLKAESEK YLEKAIAQEAIMDQILVHMILASHPEKTWEEILPDLQVANLSPTSLAAIKQNIKSPQPFEQLLNQLNRDFAVPLLARCRK IAELDHQSEPRELEIINAIAKKFDISHELGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38184; Mature: 38052
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDKPPANIEKNTKPSVIDAVAQIGKATVKQTQNLFEQGTQITGNVINHISENWLIRRIS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GFLNLNWLIGASDNVDIEKVATSVNKLKQKYPQESPSQIAHRIMMDKAAKSGGVGLASSI HHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH LPGVAAALFAVDLAATMKLQTEMLYQIAAAYGLDLKDPARKGELLTIFGLGLGGNRLLKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHH AGLALLRNIPFAGAAIAASSNATLSYSLGYAACRFYEAKLDAATSINSPETLSNLKAESE HHHHHHHCCCCCCHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KYLEKAIAQEAIMDQILVHMILASHPEKTWEEILPDLQVANLSPTSLAAIKQNIKSPQPF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCHH EQLLNQLNRDFAVPLLARCRKIAELDHQSEPRELEIINAIAKKFDISHELGV HHHHHHHCHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure PDKPPANIEKNTKPSVIDAVAQIGKATVKQTQNLFEQGTQITGNVINHISENWLIRRIS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GFLNLNWLIGASDNVDIEKVATSVNKLKQKYPQESPSQIAHRIMMDKAAKSGGVGLASSI HHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH LPGVAAALFAVDLAATMKLQTEMLYQIAAAYGLDLKDPARKGELLTIFGLGLGGNRLLKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHH AGLALLRNIPFAGAAIAASSNATLSYSLGYAACRFYEAKLDAATSINSPETLSNLKAESE HHHHHHHCCCCCCHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KYLEKAIAQEAIMDQILVHMILASHPEKTWEEILPDLQVANLSPTSLAAIKQNIKSPQPF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCHH EQLLNQLNRDFAVPLLARCRKIAELDHQSEPRELEIINAIAKKFDISHELGV HHHHHHHCHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA