| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17227641
Identifier: 17227641
GI number: 17227641
Start: 151210
End: 151659
Strand: Direct
Name: 17227641
Synonym: alr0145
Alternate gene names: NA
Gene position: 151210-151659 (Clockwise)
Preceding gene: 17227638
Following gene: 17227644
Centisome position: 2.36
GC content: 40.0
Gene sequence:
>450_bases ATGTCAATTTTGAATAAACTCCCTTGGACAGCCATAATGCTACTACTGTTGAGCTACAGCACTTTGGGTTGGGTCTTGTC CGAGATGAAAGCCCCTTGGGCTGTCTGGGTTATTCTTCTGCTGGCGATATTTTTCTTGGTAGGAAGCATCACTGCCCCTT ATCCGAAGATAGCTAATTACTCTAGTGTTTTACTTGCTTCCAGTATTAGGAGTTTTTTCGTTGCTGTAGCCGGAGCATTC TTATTTTTTATAATGATAGCTTGGTTTCGAGTGTTTCTTGATACATTACTTGTCATTTCTGCCGCTCTCTTAGCAAGAAT CGACTTCCAATCAGATGGGTTTACAGAATGGCAAGCTTTTATAGCTACATTGATTGTTTCAATTGCTGGGGTAGGATTAG GAGCATTTACAAATATGCTGTTAACCCAAAAGATAATGTTAGGTTTGTAG
Upstream 100 bases:
>100_bases CCTAAGTAAGTATTACAAATGTATAGTAATCCGATTTGATTATTAAACAAACTTAAGTATTACAAATATAGATTGCTCTG CTAAATAGCTATACCCACCC
Downstream 100 bases:
>100_bases TAGGCGCTCCATACCAAATTTAAGAACTAAAGTATTGACTACAAACAAGGTGAGCATGATCGCTCACCTTGATCGTTTAG CTAGCTACTGCTTCTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSILNKLPWTAIMLLLLSYSTLGWVLSEMKAPWAVWVILLLAIFFLVGSITAPYPKIANYSSVLLASSIRSFFVAVAGAF LFFIMIAWFRVFLDTLLVISAALLARIDFQSDGFTEWQAFIATLIVSIAGVGLGAFTNMLLTQKIMLGL
Sequences:
>Translated_149_residues MSILNKLPWTAIMLLLLSYSTLGWVLSEMKAPWAVWVILLLAIFFLVGSITAPYPKIANYSSVLLASSIRSFFVAVAGAF LFFIMIAWFRVFLDTLLVISAALLARIDFQSDGFTEWQAFIATLIVSIAGVGLGAFTNMLLTQKIMLGL >Mature_148_residues SILNKLPWTAIMLLLLSYSTLGWVLSEMKAPWAVWVILLLAIFFLVGSITAPYPKIANYSSVLLASSIRSFFVAVAGAFL FFIMIAWFRVFLDTLLVISAALLARIDFQSDGFTEWQAFIATLIVSIAGVGLGAFTNMLLTQKIMLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16432; Mature: 16301
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILNKLPWTAIMLLLLSYSTLGWVLSEMKAPWAVWVILLLAIFFLVGSITAPYPKIANY CCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH SSVLLASSIRSFFVAVAGAFLFFIMIAWFRVFLDTLLVISAALLARIDFQSDGFTEWQAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH IATLIVSIAGVGLGAFTNMLLTQKIMLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SILNKLPWTAIMLLLLSYSTLGWVLSEMKAPWAVWVILLLAIFFLVGSITAPYPKIANY CHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH SSVLLASSIRSFFVAVAGAFLFFIMIAWFRVFLDTLLVISAALLARIDFQSDGFTEWQAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH IATLIVSIAGVGLGAFTNMLLTQKIMLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA