| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17227601
Identifier: 17227601
GI number: 17227601
Start: 108919
End: 109185
Strand: Direct
Name: 17227601
Synonym: asr0105
Alternate gene names: NA
Gene position: 108919-109185 (Clockwise)
Preceding gene: 17227600
Following gene: 17227602
Centisome position: 1.7
GC content: 42.32
Gene sequence:
>267_bases ATGGAAATACAATTAATTAATATCGGTTTTGGCAACATTGTATCTGCTAACCGAGTAGTTGCCATTGTTAGTCCGGAATC AGCACCTATCAAGCGGATCATCACCGATGCTAGGGACAAAAATCAGTTAATTGATGCGACTTATGGTCGCAGAACCAGAG CTGTAATTATCACTGATTCCAGCCACGTAATTTTGTCGGCGATTCAACCGGAAACGGTAGCAAATCGGTTCGTCATTTCC CGTGAGCATCAGAGTGTAGAAAATTAG
Upstream 100 bases:
>100_bases CGTGGCTAAATGTAATGCGTTGTAACTCTTATTTTTTCGGGATAACATGAGAATACAATCCTCTTTAGTTTAGTACACCA CATAAGGTGTCAGTTTTTTT
Downstream 100 bases:
>100_bases TTGGGGGGAGGAGGAAAAACCCGCCCATATTTGCACCACATCAGCAGTACTATGTGAATTAGACAAGTTTTCTGTCACTC GTGCTACAAATTCGTTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MEIQLINIGFGNIVSANRVVAIVSPESAPIKRIITDARDKNQLIDATYGRRTRAVIITDSSHVILSAIQPETVANRFVIS REHQSVEN
Sequences:
>Translated_88_residues MEIQLINIGFGNIVSANRVVAIVSPESAPIKRIITDARDKNQLIDATYGRRTRAVIITDSSHVILSAIQPETVANRFVIS REHQSVEN >Mature_88_residues MEIQLINIGFGNIVSANRVVAIVSPESAPIKRIITDARDKNQLIDATYGRRTRAVIITDSSHVILSAIQPETVANRFVIS REHQSVEN
Specific function: Unknown
COG id: COG2052
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0296 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y105_NOSS1 (Q8Z0I8)
Other databases:
- EMBL: BA000019 - PIR: AI1819 - RefSeq: NP_484149.1 - STRING: Q8Z0I8 - GeneID: 1103702 - GenomeReviews: BA000019_GR - KEGG: ana:asr0105 - eggNOG: COG2052 - HOGENOM: HBG286498 - OMA: KRIISDA - ProtClustDB: PRK04323 - BioCyc: NSP103690:ASR0105-MONOMER - HAMAP: MF_01503 - InterPro: IPR007169 - ProDom: PD063023
Pfam domain/function: PF04025 DUF370
EC number: NA
Molecular weight: Translated: 9739; Mature: 9739
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIQLINIGFGNIVSANRVVAIVSPESAPIKRIITDARDKNQLIDATYGRRTRAVIITDS CEEEEEEECCCCEECCCEEEEEECCCCCCHHHHHHCCCCCCCEEECCCCCCEEEEEEECC SHVILSAIQPETVANRFVISREHQSVEN CCEEEEECCCCCHHCEEEEECCCCCCCC >Mature Secondary Structure MEIQLINIGFGNIVSANRVVAIVSPESAPIKRIITDARDKNQLIDATYGRRTRAVIITDS CEEEEEEECCCCEECCCEEEEEECCCCCCHHHHHHCCCCCCCEEECCCCCCEEEEEEECC SHVILSAIQPETVANRFVISREHQSVEN CCEEEEECCCCCHHCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840