| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17227552
Identifier: 17227552
GI number: 17227552
Start: 61836
End: 62198
Strand: Direct
Name: 17227552
Synonym: alr0056
Alternate gene names: NA
Gene position: 61836-62198 (Clockwise)
Preceding gene: 17227551
Following gene: 17227553
Centisome position: 0.96
GC content: 42.98
Gene sequence:
>363_bases ATGACTGAAGAATCTCTGAACATCACCGGTTTTCATGCTCACGTTTACTTTGATAGCGCTAGTTTTCCTACAGCTATGAG TATCCGTGAAGAATTAGGTAATAGATTCAATGTACAGCTTGGGCGATCGCATGAAAAACCCATTGGCCCCCACCCTAAAT CCATGTACCAAGTTGCATTCCCATCAACAGAATTCGCTCAAATTGTCCCCTGGTTAATGCTTCACCGTCAGGGATTAGAT ATTCTCGTCCATCCCTTGACAGGGGATGATGTCAGCGACCATACCCATTTTGCCTTGTGGTTGGGAGAAAAGTTAGAACT CAATATTGATTCACTCAGGAAAGTCATACCAGCTAATAACTAA
Upstream 100 bases:
>100_bases TGGAAGACTTTGGCAAATAAAAAATACTCCAGCTCAAGGAGTTAATTCAAAATCGACAAATATTCGGGGTAAATAAGCTT ATAAATTGGCAGTTAAAGTT
Downstream 100 bases:
>100_bases ACTGATGCACATCTAATTGATGATACTCAAAGCATTAATTTTTGCTTTAGTTATATTCACAGGTAAAAAACCCCTAAAAT CTATAACTGGTAAGCATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Aromatic Ring-Cleaving Dioxygenase-Like Protein; Dopa 4 5-Dioxygenase Family Protein; Aromatic Ring-Cleaving Dioxygenase; Dopa 4 5-Dioxygenase Family; Dioxygenase; DOPA 4 5-Dioxygenase; DOPA-Dioxygenase-Related Protein; Aromatic Ring-Cleaving Dioxygenase-Like; DOPA-Dioxygenase-Like Protein; DOPA 4 5-Dioxygenase-Related Protein
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTEESLNITGFHAHVYFDSASFPTAMSIREELGNRFNVQLGRSHEKPIGPHPKSMYQVAFPSTEFAQIVPWLMLHRQGLD ILVHPLTGDDVSDHTHFALWLGEKLELNIDSLRKVIPANN
Sequences:
>Translated_120_residues MTEESLNITGFHAHVYFDSASFPTAMSIREELGNRFNVQLGRSHEKPIGPHPKSMYQVAFPSTEFAQIVPWLMLHRQGLD ILVHPLTGDDVSDHTHFALWLGEKLELNIDSLRKVIPANN >Mature_119_residues TEESLNITGFHAHVYFDSASFPTAMSIREELGNRFNVQLGRSHEKPIGPHPKSMYQVAFPSTEFAQIVPWLMLHRQGLDI LVHPLTGDDVSDHTHFALWLGEKLELNIDSLRKVIPANN
Specific function: Unknown
COG id: COG3805
COG function: function code Q; Aromatic ring-cleaving dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13605; Mature: 13473
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEESLNITGFHAHVYFDSASFPTAMSIREELGNRFNVQLGRSHEKPIGPHPKSMYQVAF CCCCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEC PSTEFAQIVPWLMLHRQGLDILVHPLTGDDVSDHTHFALWLGEKLELNIDSLRKVIPANN CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCEEEECHHHHHHHCCCCC >Mature Secondary Structure TEESLNITGFHAHVYFDSASFPTAMSIREELGNRFNVQLGRSHEKPIGPHPKSMYQVAF CCCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEC PSTEFAQIVPWLMLHRQGLDILVHPLTGDDVSDHTHFALWLGEKLELNIDSLRKVIPANN CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCEEEECHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA