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The map label for this gene is 17227551

Identifier: 17227551

GI number: 17227551

Start: 60168

End: 61811

Strand: Direct

Name: 17227551

Synonym: alr0055

Alternate gene names: NA

Gene position: 60168-61811 (Clockwise)

Preceding gene: 17227550

Following gene: 17227552

Centisome position: 0.94

GC content: 38.99

Gene sequence:

>1644_bases
ATGCGGGATCTCAAACTTACTCCGCGTTGGTTGAGGTTGTTTCTACTAATACTGTTGGTAACAGGTGTATTTTTCCGCTT
TTTTCATCTCGACTACAAAATTTACTGGCACGATGAAGCCTATACATCTATACGGGCGGCGGGCTTCACACGCCAAGAAA
TAGACCAAGAAATTTTTCAAAATCACATCATACCAGCACCATATTTACTGAAGTTTCAGCGATTGAAACCAGGAAGCACT
GTAGTAGATACAATTAACTCACTAAAAATTGAAGACCCACATCATCCACCACTCTACTTCTTAATGGCTCGCTTTTGGAT
GCAGATGTTTGGCAGTTCTCTCACTGCGTCGCGGACATTGCCTGCTTTACTAAGCTTGTTGGCGTTGCCATTAATGTATG
CTTTGGGGTTGGAGTTATTTGCTTCTACTACAGTGGCTTTGTTCGCAACAGTGCTGTTAGCTTTGTCTCCTTTTGATATT
CTGTTTGCTCAGACAGCCAGACAGTATAGCTTACTAACAGTAGCAGTCATTGGGAGCAATTTTTTATTATTACGGGCTTG
GCGCTTACCTACTTGGCAAAACTGGAGTTTGTACACTTTCAGCAACATTATAGGCTGGTACACCCATCCTTTTTTTGGTC
TAACGGTAGTTGCTCAAGGAACTTATATATTTTTAGGGCGGACATTTCAGCAAGAAAATAGGCAATCGCCTAGAAAGAAT
GTCATATATTTTTTAGTGGCGATCGCTAGCTCGCTTATTTTATATCTTCCTTGGTTAGTAGTACTAGTCACCAACCGTCA
ACGAGTGTTACAAACCACAAGTTGGACTGGAGACAAAGTTGATATATGGTATTTGTTAAAACTATGGCTGGTTAGTTTTA
GTTCTTTATTTTTTGACTTAGACTTTGGTTTTGACACTATCTGGAACGGTATCCGTTCTTCTCTACTGAAACTAGCCGTT
ATTATATTAATCACTGGGGCAACTTATTTAGTATGTCGCCAAACCGAAAGAGCAACCTGGTTATTTATTATTACTACAAT
TCTCGTTCCTTTCCTCAGTTTAGCTTTGCCAGATTTACTATTAGGAGGCAGGCGCTCTACTGTCAGCCGTTACTTGATAT
CTTCCTATCCTGGTGTGCAACTTGCAGTTGCTTATTTATTAGGAACTAAAATTATTTACCAACGCTGGTTATGGCAAAGT
CTGACTCTACTTATTTTCGCAGGTAGTATCGCATCATCTACTGTCAGTGCTTCTGCACATACTTGGTGGAGCAAGGATTT
AAGCTATCATAATTTTGAAATAATTAATCGGATTAATGGTATTTCCTCACCAGTGATAGTCAGTGATATTGGAGATGAAT
ACACCAACACTGGCGATCTAATTGCCCAGAGTTATTCACTTCAGAATCATGTAAGATTACTGCTATTAACTCAGCCTACT
AATTTGGAGAATGCTAATTTAAATCTTTTCCTTTCCCAAAATAATCAATTGTTGACATTTCGTCCATCACAGCAAATCTT
GGGGGCTTTAAAGCAAAATGAAAACTATGTTTTCCCAGTGTTTGAGCCTGGAAGACTTTGGCAAATAAAAAATACTCCAG
CTCAAGGAGTTAATTCAAAATCGACAAATATTCGGGGTAAATAA

Upstream 100 bases:

>100_bases
AGAAGGGCTTGTTACCCCTGCTCCCTGCCCCCTTCCCCTCTGCCTCTTCGGTGATTACAGTGACTATGCTTTAGATTTCT
AATTCATGCGGTGATTTGCT

Downstream 100 bases:

>100_bases
GCTTATAAATTGGCAGTTAAAGTTATGACTGAAGAATCTCTGAACATCACCGGTTTTCATGCTCACGTTTACTTTGATAG
CGCTAGTTTTCCTACAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MRDLKLTPRWLRLFLLILLVTGVFFRFFHLDYKIYWHDEAYTSIRAAGFTRQEIDQEIFQNHIIPAPYLLKFQRLKPGST
VVDTINSLKIEDPHHPPLYFLMARFWMQMFGSSLTASRTLPALLSLLALPLMYALGLELFASTTVALFATVLLALSPFDI
LFAQTARQYSLLTVAVIGSNFLLLRAWRLPTWQNWSLYTFSNIIGWYTHPFFGLTVVAQGTYIFLGRTFQQENRQSPRKN
VIYFLVAIASSLILYLPWLVVLVTNRQRVLQTTSWTGDKVDIWYLLKLWLVSFSSLFFDLDFGFDTIWNGIRSSLLKLAV
IILITGATYLVCRQTERATWLFIITTILVPFLSLALPDLLLGGRRSTVSRYLISSYPGVQLAVAYLLGTKIIYQRWLWQS
LTLLIFAGSIASSTVSASAHTWWSKDLSYHNFEIINRINGISSPVIVSDIGDEYTNTGDLIAQSYSLQNHVRLLLLTQPT
NLENANLNLFLSQNNQLLTFRPSQQILGALKQNENYVFPVFEPGRLWQIKNTPAQGVNSKSTNIRGK

Sequences:

>Translated_547_residues
MRDLKLTPRWLRLFLLILLVTGVFFRFFHLDYKIYWHDEAYTSIRAAGFTRQEIDQEIFQNHIIPAPYLLKFQRLKPGST
VVDTINSLKIEDPHHPPLYFLMARFWMQMFGSSLTASRTLPALLSLLALPLMYALGLELFASTTVALFATVLLALSPFDI
LFAQTARQYSLLTVAVIGSNFLLLRAWRLPTWQNWSLYTFSNIIGWYTHPFFGLTVVAQGTYIFLGRTFQQENRQSPRKN
VIYFLVAIASSLILYLPWLVVLVTNRQRVLQTTSWTGDKVDIWYLLKLWLVSFSSLFFDLDFGFDTIWNGIRSSLLKLAV
IILITGATYLVCRQTERATWLFIITTILVPFLSLALPDLLLGGRRSTVSRYLISSYPGVQLAVAYLLGTKIIYQRWLWQS
LTLLIFAGSIASSTVSASAHTWWSKDLSYHNFEIINRINGISSPVIVSDIGDEYTNTGDLIAQSYSLQNHVRLLLLTQPT
NLENANLNLFLSQNNQLLTFRPSQQILGALKQNENYVFPVFEPGRLWQIKNTPAQGVNSKSTNIRGK
>Mature_547_residues
MRDLKLTPRWLRLFLLILLVTGVFFRFFHLDYKIYWHDEAYTSIRAAGFTRQEIDQEIFQNHIIPAPYLLKFQRLKPGST
VVDTINSLKIEDPHHPPLYFLMARFWMQMFGSSLTASRTLPALLSLLALPLMYALGLELFASTTVALFATVLLALSPFDI
LFAQTARQYSLLTVAVIGSNFLLLRAWRLPTWQNWSLYTFSNIIGWYTHPFFGLTVVAQGTYIFLGRTFQQENRQSPRKN
VIYFLVAIASSLILYLPWLVVLVTNRQRVLQTTSWTGDKVDIWYLLKLWLVSFSSLFFDLDFGFDTIWNGIRSSLLKLAV
IILITGATYLVCRQTERATWLFIITTILVPFLSLALPDLLLGGRRSTVSRYLISSYPGVQLAVAYLLGTKIIYQRWLWQS
LTLLIFAGSIASSTVSASAHTWWSKDLSYHNFEIINRINGISSPVIVSDIGDEYTNTGDLIAQSYSLQNHVRLLLLTQPT
NLENANLNLFLSQNNQLLTFRPSQQILGALKQNENYVFPVFEPGRLWQIKNTPAQGVNSKSTNIRGK

Specific function: Unknown

COG id: COG5305

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62612; Mature: 62612

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLKLTPRWLRLFLLILLVTGVFFRFFHLDYKIYWHDEAYTSIRAAGFTRQEIDQEIFQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHCCCCHHHHHHHHHH
NHIIPAPYLLKFQRLKPGSTVVDTINSLKIEDPHHPPLYFLMARFWMQMFGSSLTASRTL
CCCCCCHHHHEECCCCCCCHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
PALLSLLALPLMYALGLELFASTTVALFATVLLALSPFDILFAQTARQYSLLTVAVIGSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEECCC
FLLLRAWRLPTWQNWSLYTFSNIIGWYTHPFFGLTVVAQGTYIFLGRTFQQENRQSPRKN
EEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHCEEEEECCCEEEEECHHHHHHCCCCHHH
VIYFLVAIASSLILYLPWLVVLVTNRQRVLQTTSWTGDKVDIWYLLKLWLVSFSSLFFDL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHEEE
DFGFDTIWNGIRSSLLKLAVIILITGATYLVCRQTERATWLFIITTILVPFLSLALPDLL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LGGRRSTVSRYLISSYPGVQLAVAYLLGTKIIYQRWLWQSLTLLIFAGSIASSTVSASAH
HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
TWWSKDLSYHNFEIINRINGISSPVIVSDIGDEYTNTGDLIAQSYSLQNHVRLLLLTQPT
HHHHCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEECCC
NLENANLNLFLSQNNQLLTFRPSQQILGALKQNENYVFPVFEPGRLWQIKNTPAQGVNSK
CCCCCCEEEEEECCCEEEEECCHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCC
STNIRGK
CCCCCCC
>Mature Secondary Structure
MRDLKLTPRWLRLFLLILLVTGVFFRFFHLDYKIYWHDEAYTSIRAAGFTRQEIDQEIFQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHCCCCHHHHHHHHHH
NHIIPAPYLLKFQRLKPGSTVVDTINSLKIEDPHHPPLYFLMARFWMQMFGSSLTASRTL
CCCCCCHHHHEECCCCCCCHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
PALLSLLALPLMYALGLELFASTTVALFATVLLALSPFDILFAQTARQYSLLTVAVIGSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEECCC
FLLLRAWRLPTWQNWSLYTFSNIIGWYTHPFFGLTVVAQGTYIFLGRTFQQENRQSPRKN
EEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHCEEEEECCCEEEEECHHHHHHCCCCHHH
VIYFLVAIASSLILYLPWLVVLVTNRQRVLQTTSWTGDKVDIWYLLKLWLVSFSSLFFDL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHEEE
DFGFDTIWNGIRSSLLKLAVIILITGATYLVCRQTERATWLFIITTILVPFLSLALPDLL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LGGRRSTVSRYLISSYPGVQLAVAYLLGTKIIYQRWLWQSLTLLIFAGSIASSTVSASAH
HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
TWWSKDLSYHNFEIINRINGISSPVIVSDIGDEYTNTGDLIAQSYSLQNHVRLLLLTQPT
HHHHCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEECCC
NLENANLNLFLSQNNQLLTFRPSQQILGALKQNENYVFPVFEPGRLWQIKNTPAQGVNSK
CCCCCCEEEEEECCCEEEEECCHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCC
STNIRGK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA