| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17227549
Identifier: 17227549
GI number: 17227549
Start: 57224
End: 58309
Strand: Direct
Name: 17227549
Synonym: alr0053
Alternate gene names: NA
Gene position: 57224-58309 (Clockwise)
Preceding gene: 17227548
Following gene: 17227550
Centisome position: 0.89
GC content: 43.46
Gene sequence:
>1086_bases GTGGTGGCAATTCTCATGACCTCATCTGCGTCGTTTGAAACATTTGAGTCTCTCCAAGCCGATCTTGCTGAACTAATCGA TCGCTTACCGACATTAAAAAATCGGCAACTTATTTATAATGCTTTGGCAACAATAGTCCGTTTAGCGGACAGCGATATTG AACGTCTCGATTGGAAAATATTATCTGCGGCTTTAGCAGATATGGAACGAGGCTTCCAATTATTTTATGATTACCGACAC GTCCGTAAAGTAACCATATTCGGTTCGGCTCGTCTATTACCACAAGCCCCAGAGTACCAAATGGCCGTGGAATTTGGCCG TGCGGTGACTCGGATGGGATTTATGGTGATGACCGGAGGTGGTGGTGGTATTATGCAGGCTGGTCATGAAGGTGCAGGAC GAGAAAATTCCTTTGGGTTGAACATTCACCTACCTTTTGAACAGCAAGCAAACCCAATTATTGAGGGTGATCCTAAGCTA ATTCACTTTAAATATTTCTTTACCCGCAAGCTGTTTCTCCTCAAAGAAAGCGATGCGATAGCTTTATTTCCTGGTGGGTT TGGTACTCAAGATGAGGCGTTTGAGTGCATGACTTTAAGCCAGACAGGTAAATTTGGCCCCGTACCAGTGGTTTTAATAG ATCATCCTGGCGGTGATTATTGGCAGTCTTGGAGTGAATACATCAATCAGCATCTAGTGAAAACAGGTTTGGTAAATCCT GAAGACCCTAACCTATACACCGTCACAGATAGTCTAGAAGTAGCCTGTGATGCCATAACCCGCTTTTATCAGGTGTATCA CTCCTGTCGCTATGTGGGTGATAGGTTGGTAATTCGCTTAACCCAAGAATTATCAGACGCTGAGGTTGAGCAACTGAATG CTGAATTTAGCGACATTCTAGTCCAAGGAAAGATTGAAAAAAGTCAGTCTTTGCCTCAAGAAAACCAAGATGAAACCGTG GGACTACCTCGCCTAGTTTTATCCTTCAATCAAAGAGACTTGGGACGTTTATATCAGATGATTGCGGTAATTAATCAAAT GGGTATTCCTGCTACCAAAGAGCAGGTACATCCAGAGAGGAAATAG
Upstream 100 bases:
>100_bases CTACTTGAGAGGTGACCCTAAGTTATTACTTTGAGATGTGATGGGAATCCAGTTTATTCATAAAATTGCACACGAAAATT AGGTAAAATGTAATGCCATT
Downstream 100 bases:
>100_bases TTTTTGGTCATTGGTAATTTATACCCAATACTTGATACCGTCCAACTTACTTTGAGAGGAGAAAAAAATACCAGTTATGA TAACTCAATGCTGATGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MVAILMTSSASFETFESLQADLAELIDRLPTLKNRQLIYNALATIVRLADSDIERLDWKILSAALADMERGFQLFYDYRH VRKVTIFGSARLLPQAPEYQMAVEFGRAVTRMGFMVMTGGGGGIMQAGHEGAGRENSFGLNIHLPFEQQANPIIEGDPKL IHFKYFFTRKLFLLKESDAIALFPGGFGTQDEAFECMTLSQTGKFGPVPVVLIDHPGGDYWQSWSEYINQHLVKTGLVNP EDPNLYTVTDSLEVACDAITRFYQVYHSCRYVGDRLVIRLTQELSDAEVEQLNAEFSDILVQGKIEKSQSLPQENQDETV GLPRLVLSFNQRDLGRLYQMIAVINQMGIPATKEQVHPERK
Sequences:
>Translated_361_residues MVAILMTSSASFETFESLQADLAELIDRLPTLKNRQLIYNALATIVRLADSDIERLDWKILSAALADMERGFQLFYDYRH VRKVTIFGSARLLPQAPEYQMAVEFGRAVTRMGFMVMTGGGGGIMQAGHEGAGRENSFGLNIHLPFEQQANPIIEGDPKL IHFKYFFTRKLFLLKESDAIALFPGGFGTQDEAFECMTLSQTGKFGPVPVVLIDHPGGDYWQSWSEYINQHLVKTGLVNP EDPNLYTVTDSLEVACDAITRFYQVYHSCRYVGDRLVIRLTQELSDAEVEQLNAEFSDILVQGKIEKSQSLPQENQDETV GLPRLVLSFNQRDLGRLYQMIAVINQMGIPATKEQVHPERK >Mature_361_residues MVAILMTSSASFETFESLQADLAELIDRLPTLKNRQLIYNALATIVRLADSDIERLDWKILSAALADMERGFQLFYDYRH VRKVTIFGSARLLPQAPEYQMAVEFGRAVTRMGFMVMTGGGGGIMQAGHEGAGRENSFGLNIHLPFEQQANPIIEGDPKL IHFKYFFTRKLFLLKESDAIALFPGGFGTQDEAFECMTLSQTGKFGPVPVVLIDHPGGDYWQSWSEYINQHLVKTGLVNP EDPNLYTVTDSLEVACDAITRFYQVYHSCRYVGDRLVIRLTQELSDAEVEQLNAEFSDILVQGKIEKSQSLPQENQDETV GLPRLVLSFNQRDLGRLYQMIAVINQMGIPATKEQVHPERK
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40693; Mature: 40693
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAILMTSSASFETFESLQADLAELIDRLPTLKNRQLIYNALATIVRLADSDIERLDWKI CEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH LSAALADMERGFQLFYDYRHVRKVTIFGSARLLPQAPEYQMAVEFGRAVTRMGFMVMTGG HHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEECC GGGIMQAGHEGAGRENSFGLNIHLPFEQQANPIIEGDPKLIHFKYFFTRKLFLLKESDAI CCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCEEEEEEHHHHEEEEEECCCEE ALFPGGFGTQDEAFECMTLSQTGKFGPVPVVLIDHPGGDYWQSWSEYINQHLVKTGLVNP EEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC EDPNLYTVTDSLEVACDAITRFYQVYHSCRYVGDRLVIRLTQELSDAEVEQLNAEFSDIL CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHE VQGKIEKSQSLPQENQDETVGLPRLVLSFNQRDLGRLYQMIAVINQMGIPATKEQVHPER EECCCHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCC K C >Mature Secondary Structure MVAILMTSSASFETFESLQADLAELIDRLPTLKNRQLIYNALATIVRLADSDIERLDWKI CEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH LSAALADMERGFQLFYDYRHVRKVTIFGSARLLPQAPEYQMAVEFGRAVTRMGFMVMTGG HHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEECC GGGIMQAGHEGAGRENSFGLNIHLPFEQQANPIIEGDPKLIHFKYFFTRKLFLLKESDAI CCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCEEEEEEHHHHEEEEEECCCEE ALFPGGFGTQDEAFECMTLSQTGKFGPVPVVLIDHPGGDYWQSWSEYINQHLVKTGLVNP EEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC EDPNLYTVTDSLEVACDAITRFYQVYHSCRYVGDRLVIRLTQELSDAEVEQLNAEFSDIL CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHE VQGKIEKSQSLPQENQDETVGLPRLVLSFNQRDLGRLYQMIAVINQMGIPATKEQVHPER EECCCHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA