| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17227526
Identifier: 17227526
GI number: 17227526
Start: 28285
End: 30057
Strand: Direct
Name: 17227526
Synonym: alr0030
Alternate gene names: NA
Gene position: 28285-30057 (Clockwise)
Preceding gene: 17227525
Following gene: 17227527
Centisome position: 0.44
GC content: 38.13
Gene sequence:
>1773_bases GTGTTTTTAAATCTCATTAATCCGCCAAATAAATTTATAAAATTCCTTGGTTTTGTACAAGATATGGTAGATACAGAAAA GGTTTTATCACTACCATCATCAATATGGCAACCAATTGATAACCGTTGGAAGTTATCAAAAATTGTTCTGATTGGCGAAT ATATTAAATATAGAACTTTTAATGGAGCCAACAAAGCTCTGCCCGTACTGGCATCTAGTTTAGTCAATGCTGGGTTTAAC CGAGTTCTTCAGCTAGATTTAGAGCGTCCTGACTTGACCATTGATCATGTTTTACATGAGGTAATAAATGCTGATTTAAT CATCTTTGCAGGTTGCTTAACTACTCAATGGCAAGAAATTGATGAACATAGCCAAAAAATATTTACAGAACTCAAGAAAT ATAGACGGGAAAATGTTCCAATTTTAGTTGGTGGCTATGCGACAAAAAGCATCGAAGATATAGCCAGAATTACTCCTTGG ATCACAGGATTTTGTGATGGTGAGGGTGAAGAATCAATTGTAGAAATTGCTTATGCAGTTGCCAAAGGGAATTTCTACAG AAACATGAAACATTTACCTGGATTATGTTTCATGAACCAAGATAGGGAATTTTACCGCGTTGCCCCTAACCATAGCCAGC ATATTAAGTTTCATCATTCTATTGCCCCTAGAGTTGATAACTTTGACGATATAGACCAAAATTTAGGATTAATCCATATT CCCCAAATTCACAATATGGATATTTTTAAAACTAAAGACGGGAGGCAGCTAAAAACAGCCCAAATGTTTACTCAAAGGGG TTGTCCTTGGGGCTGTGGCTTCTGTAATAAAAGTCAGGAAAACAATCATATTGTGAGATTAAGCGAAACTTCTTTGCGTC AGCAATTGCGGCAATTAAAGCAGCGTGATTATGAAGCAATTTATCTAGATGTTGACACTTTTACCGCCCATACAACCGCA GCCAAAAGGGAAGCGGAGATTCTTCAGCAAGAAGGTTTTATGTGGGGTTCAAATACTAGAATTGACAAAATTGACTATGA ACAGATGCGCTATTTAGCAGAGCATAACTGTGTCTATATGTTCTTTGGTGTTGAGCATACTTTACCAGAAGTATCCTTAG CTAATCATAAATTTAATGGCTCGATTCAAAGTCAAATCAAGCAAGCCTTTGATTACCCAGCCAAAATAAAAAAAGCATTT CAAGATATGAATAAAGCTGGATTACCCAGCAGTTATTTTTTGATTTTAGGGCTACCAAAAGCCAAGCTAAATGAAGATAA GACTAAAATTATCGGTTATGAACCCACAACTTTAGAAGATGATCTGACTGCGATTCGCTTTGGCTTAGAAGAATGCCATC CTGACTTTTTAAACTTTAATGTATTGCGATTTATGCCAGGAAGTTTTGCGGCTGATACACCTGGCGATTGCAACTACTCT TGTGTACGTCCTTCGGGGAATAAACCAATTACCGCCGGCTATTTCTTACAACGCGCTGTCCAACACTATGGTTATCCCCA GTCACCAACACACGGAGTTTACCGACTGTGTGAGTCCGTAGGTAGATATCAGCCGATAAGCACCGCAATAAATCCCCAAC GGGTTTACAACACGATTTGCTACGCCATGCAATTGATTAACGCCAAAATCGACGCAGGTGGTAAAGCTACAAAGTTATTT ATTGACAGAGATTTACTAGCTTTAGGTTTAGTTAGTCAGGATGAACAGGGACGATATGCGATCGCTCCTTTAGAAGATTT TGCCAGAGTTTAG
Upstream 100 bases:
>100_bases CATAATTTCCAGAGTCATATTTTTGAAATCAGAAAATATTAGACTCTTACACAGGTGTGCATTACCACCAATCAAAATCT ATAAAGATAGGTGGTGAAAA
Downstream 100 bases:
>100_bases GGGTATAGGGGAAGAAGTAGAGTCTAAATTCTTCCCTCACCCTTACACCCTTCCAAAGTTACGAAATCTTGAATATATAT TCACCAAACCCAGATTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MFLNLINPPNKFIKFLGFVQDMVDTEKVLSLPSSIWQPIDNRWKLSKIVLIGEYIKYRTFNGANKALPVLASSLVNAGFN RVLQLDLERPDLTIDHVLHEVINADLIIFAGCLTTQWQEIDEHSQKIFTELKKYRRENVPILVGGYATKSIEDIARITPW ITGFCDGEGEESIVEIAYAVAKGNFYRNMKHLPGLCFMNQDREFYRVAPNHSQHIKFHHSIAPRVDNFDDIDQNLGLIHI PQIHNMDIFKTKDGRQLKTAQMFTQRGCPWGCGFCNKSQENNHIVRLSETSLRQQLRQLKQRDYEAIYLDVDTFTAHTTA AKREAEILQQEGFMWGSNTRIDKIDYEQMRYLAEHNCVYMFFGVEHTLPEVSLANHKFNGSIQSQIKQAFDYPAKIKKAF QDMNKAGLPSSYFLILGLPKAKLNEDKTKIIGYEPTTLEDDLTAIRFGLEECHPDFLNFNVLRFMPGSFAADTPGDCNYS CVRPSGNKPITAGYFLQRAVQHYGYPQSPTHGVYRLCESVGRYQPISTAINPQRVYNTICYAMQLINAKIDAGGKATKLF IDRDLLALGLVSQDEQGRYAIAPLEDFARV
Sequences:
>Translated_590_residues MFLNLINPPNKFIKFLGFVQDMVDTEKVLSLPSSIWQPIDNRWKLSKIVLIGEYIKYRTFNGANKALPVLASSLVNAGFN RVLQLDLERPDLTIDHVLHEVINADLIIFAGCLTTQWQEIDEHSQKIFTELKKYRRENVPILVGGYATKSIEDIARITPW ITGFCDGEGEESIVEIAYAVAKGNFYRNMKHLPGLCFMNQDREFYRVAPNHSQHIKFHHSIAPRVDNFDDIDQNLGLIHI PQIHNMDIFKTKDGRQLKTAQMFTQRGCPWGCGFCNKSQENNHIVRLSETSLRQQLRQLKQRDYEAIYLDVDTFTAHTTA AKREAEILQQEGFMWGSNTRIDKIDYEQMRYLAEHNCVYMFFGVEHTLPEVSLANHKFNGSIQSQIKQAFDYPAKIKKAF QDMNKAGLPSSYFLILGLPKAKLNEDKTKIIGYEPTTLEDDLTAIRFGLEECHPDFLNFNVLRFMPGSFAADTPGDCNYS CVRPSGNKPITAGYFLQRAVQHYGYPQSPTHGVYRLCESVGRYQPISTAINPQRVYNTICYAMQLINAKIDAGGKATKLF IDRDLLALGLVSQDEQGRYAIAPLEDFARV >Mature_590_residues MFLNLINPPNKFIKFLGFVQDMVDTEKVLSLPSSIWQPIDNRWKLSKIVLIGEYIKYRTFNGANKALPVLASSLVNAGFN RVLQLDLERPDLTIDHVLHEVINADLIIFAGCLTTQWQEIDEHSQKIFTELKKYRRENVPILVGGYATKSIEDIARITPW ITGFCDGEGEESIVEIAYAVAKGNFYRNMKHLPGLCFMNQDREFYRVAPNHSQHIKFHHSIAPRVDNFDDIDQNLGLIHI PQIHNMDIFKTKDGRQLKTAQMFTQRGCPWGCGFCNKSQENNHIVRLSETSLRQQLRQLKQRDYEAIYLDVDTFTAHTTA AKREAEILQQEGFMWGSNTRIDKIDYEQMRYLAEHNCVYMFFGVEHTLPEVSLANHKFNGSIQSQIKQAFDYPAKIKKAF QDMNKAGLPSSYFLILGLPKAKLNEDKTKIIGYEPTTLEDDLTAIRFGLEECHPDFLNFNVLRFMPGSFAADTPGDCNYS CVRPSGNKPITAGYFLQRAVQHYGYPQSPTHGVYRLCESVGRYQPISTAINPQRVYNTICYAMQLINAKIDAGGKATKLF IDRDLLALGLVSQDEQGRYAIAPLEDFARV
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67393; Mature: 67393
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLNLINPPNKFIKFLGFVQDMVDTEKVLSLPSSIWQPIDNRWKLSKIVLIGEYIKYRTF CEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEHHHEEEEEHHHHEEEC NGANKALPVLASSLVNAGFNRVLQLDLERPDLTIDHVLHEVINADLIIFAGCLTTQWQEI CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHH DEHSQKIFTELKKYRRENVPILVGGYATKSIEDIARITPWITGFCDGEGEESIVEIAYAV HHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHH AKGNFYRNMKHLPGLCFMNQDREFYRVAPNHSQHIKFHHSIAPRVDNFDDIDQNLGLIHI HHCHHHHHHHHCCCEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCEEEC PQIHNMDIFKTKDGRQLKTAQMFTQRGCPWGCGFCNKSQENNHIVRLSETSLRQQLRQLK CCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHH QRDYEAIYLDVDTFTAHTTAAKREAEILQQEGFMWGSNTRIDKIDYEQMRYLAEHNCVYM HCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCEEEE FFGVEHTLPEVSLANHKFNGSIQSQIKQAFDYPAKIKKAFQDMNKAGLPSSYFLILGLPK EECCCCCCCCCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCH AKLNEDKTKIIGYEPTTLEDDLTAIRFGLEECHPDFLNFNVLRFMPGSFAADTPGDCNYS HHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCCCCCCCEE CVRPSGNKPITAGYFLQRAVQHYGYPQSPTHGVYRLCESVGRYQPISTAINPQRVYNTIC EECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHCCCHHHHHHHHH YAMQLINAKIDAGGKATKLFIDRDLLALGLVSQDEQGRYAIAPLEDFARV HHHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCCCCCCEEECCHHHHHCC >Mature Secondary Structure MFLNLINPPNKFIKFLGFVQDMVDTEKVLSLPSSIWQPIDNRWKLSKIVLIGEYIKYRTF CEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEHHHEEEEEHHHHEEEC NGANKALPVLASSLVNAGFNRVLQLDLERPDLTIDHVLHEVINADLIIFAGCLTTQWQEI CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHH DEHSQKIFTELKKYRRENVPILVGGYATKSIEDIARITPWITGFCDGEGEESIVEIAYAV HHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHH AKGNFYRNMKHLPGLCFMNQDREFYRVAPNHSQHIKFHHSIAPRVDNFDDIDQNLGLIHI HHCHHHHHHHHCCCEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCEEEC PQIHNMDIFKTKDGRQLKTAQMFTQRGCPWGCGFCNKSQENNHIVRLSETSLRQQLRQLK CCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHH QRDYEAIYLDVDTFTAHTTAAKREAEILQQEGFMWGSNTRIDKIDYEQMRYLAEHNCVYM HCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCEEEE FFGVEHTLPEVSLANHKFNGSIQSQIKQAFDYPAKIKKAFQDMNKAGLPSSYFLILGLPK EECCCCCCCCCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCH AKLNEDKTKIIGYEPTTLEDDLTAIRFGLEECHPDFLNFNVLRFMPGSFAADTPGDCNYS HHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCCCCCCCEE CVRPSGNKPITAGYFLQRAVQHYGYPQSPTHGVYRLCESVGRYQPISTAINPQRVYNTIC EECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHCCCHHHHHHHHH YAMQLINAKIDAGGKATKLFIDRDLLALGLVSQDEQGRYAIAPLEDFARV HHHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCCCCCCEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA