Click here to switch to the map view.

The map label for this gene is glgA [H]

Identifier: 17227527

GI number: 17227527

Start: 30263

End: 31741

Strand: Direct

Name: glgA [H]

Synonym: alr0031

Alternate gene names: 17227527

Gene position: 30263-31741 (Clockwise)

Preceding gene: 17227526

Following gene: 17227529

Centisome position: 0.47

GC content: 41.51

Gene sequence:

>1479_bases
ATGTACATTGTACAGATTGCCTCGGAATGCGCTCCTGTAATTAAGGCAGGGGGTTTAGGGGATGTCGTTTACGGATTGAG
TCGAGAATTAGAGATTCGGGGCAATTGCGTCGAGCTAATTCTGCCTAAGTATGATTGTATGCGCTACGACCATGTTTGGG
GACTGCACGAGGCTTACTTAAACTTGTGGGTTCCCTGGTTTGGTGCAGCAATTCACTGTACTGTCTACTGCGGTTGGGTA
CATGGGCGAGTATGTTTTTTCATTGAACCCCATTCCGAGGACAATTTCTTTAATCGGGGCTGCTATTACGGTTGTGATGA
TGATGATATGCGCTTTGCCTTTTTTAGCAAAGCCGCTTTAGAATTTCTCCATCAAAGCAATAAGCGCCCTGATATTATCC
ATTGTCATGATTGGCAAACAGGCTTAATTCCTGTCATGCTCTATGAGATCTACAAGTATCATGGCATGGACACCCAACGG
GTTTGCTACACCATCCACAACTTTAAACATCAAGGAATTGGTGGTGTCAAAACTCTCTGGGCGACAGGGTTAAACAGAGA
AGCTTATTACTTCCAAGATGACAAGCTAAGGGATGACCATAACCCCTTTGCATTGAATTACATGAAAGGCGGTATAGTCT
ACTCGAACGCTGTCACCACAGTTTCACCAAACCACGCCTTAGAAGCACAATATACAGACGTTGGTTGTGGCTTAGGTCAT
ACTTTGTATCTACACAAAGAAAAATTTAGCGGGGTTCTCAACGGTATTGATTACGATTTTTGGAATCCAGAAATTGACCG
TCACATCCCCGATAACTACAGCCAAGACGATTTTGAACAAAAACTATATAACAAAAAAGCTTTGCGTGAGCGCTTGTTGT
TGCAAGCTGCTGATAAACCAATCATTGCTTACATCGGGCGTTTAGATAATCAAAAAGGCGTGCATCTTGTCCACCATGCC
ATTTATCATGCCTTGAATAAAGGAGCGCAATTTGTATTATTGGGTTCAGCAACAGAAGCAGGAATCAATGCTCATTTTCG
TCATGAAAAACAGTTTTTAAATAGCAATCCTGATGTCCATTTAGAATTGGGCTTTAACGAAGAGTTGTCTCATCTGATTT
ATGCCGGGGCTGATATGATTGTTGTTCCCAGCAATTATGAACCCTGCGGTTTAACGCAAATGATTGGTTTGAAGTATGGT
ACTGTTCCCATTGTGCGCGGTGTTGGTGGACTGGTAAATACAGTATTTGACCGAGATTACGATCAAAATTTACCACCAGA
AAAACGCAATGGTTATGTATTTTATCAATCTGATAACCAAGCTTTAGAGTCAGCAATGAATCGGGCAATTGATTTGTGGT
ATCAGTCTCCTGAACAGTTCCAACAATTAGCGATTCAGGGAATGAAATATGACTACTCATGGAATAATCCAGGCACGGAA
TATTTAAATATTTACGAATGGATTAAGTACAAATGGTAG

Upstream 100 bases:

>100_bases
AATCCTCTTATAACATTCCCTTAGTCACTTGTCAATGAGTACATATTTCATGTACTCACTAGTATAGTAAAGATGAACTT
TTGTGAAGCGAGGACTACGG

Downstream 100 bases:

>100_bases
GTCAGTAATTCGTAATTGATAATACTCACCTTTAGAGAGAAGCAAGTTAAGAATTAATATCTGTGGGGTGGGCATTGCCC
ACCTTTTCATTTTTTGGTAG

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase 1 [H]

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MYIVQIASECAPVIKAGGLGDVVYGLSRELEIRGNCVELILPKYDCMRYDHVWGLHEAYLNLWVPWFGAAIHCTVYCGWV
HGRVCFFIEPHSEDNFFNRGCYYGCDDDDMRFAFFSKAALEFLHQSNKRPDIIHCHDWQTGLIPVMLYEIYKYHGMDTQR
VCYTIHNFKHQGIGGVKTLWATGLNREAYYFQDDKLRDDHNPFALNYMKGGIVYSNAVTTVSPNHALEAQYTDVGCGLGH
TLYLHKEKFSGVLNGIDYDFWNPEIDRHIPDNYSQDDFEQKLYNKKALRERLLLQAADKPIIAYIGRLDNQKGVHLVHHA
IYHALNKGAQFVLLGSATEAGINAHFRHEKQFLNSNPDVHLELGFNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYG
TVPIVRGVGGLVNTVFDRDYDQNLPPEKRNGYVFYQSDNQALESAMNRAIDLWYQSPEQFQQLAIQGMKYDYSWNNPGTE
YLNIYEWIKYKW

Sequences:

>Translated_492_residues
MYIVQIASECAPVIKAGGLGDVVYGLSRELEIRGNCVELILPKYDCMRYDHVWGLHEAYLNLWVPWFGAAIHCTVYCGWV
HGRVCFFIEPHSEDNFFNRGCYYGCDDDDMRFAFFSKAALEFLHQSNKRPDIIHCHDWQTGLIPVMLYEIYKYHGMDTQR
VCYTIHNFKHQGIGGVKTLWATGLNREAYYFQDDKLRDDHNPFALNYMKGGIVYSNAVTTVSPNHALEAQYTDVGCGLGH
TLYLHKEKFSGVLNGIDYDFWNPEIDRHIPDNYSQDDFEQKLYNKKALRERLLLQAADKPIIAYIGRLDNQKGVHLVHHA
IYHALNKGAQFVLLGSATEAGINAHFRHEKQFLNSNPDVHLELGFNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYG
TVPIVRGVGGLVNTVFDRDYDQNLPPEKRNGYVFYQSDNQALESAMNRAIDLWYQSPEQFQQLAIQGMKYDYSWNNPGTE
YLNIYEWIKYKW
>Mature_492_residues
MYIVQIASECAPVIKAGGLGDVVYGLSRELEIRGNCVELILPKYDCMRYDHVWGLHEAYLNLWVPWFGAAIHCTVYCGWV
HGRVCFFIEPHSEDNFFNRGCYYGCDDDDMRFAFFSKAALEFLHQSNKRPDIIHCHDWQTGLIPVMLYEIYKYHGMDTQR
VCYTIHNFKHQGIGGVKTLWATGLNREAYYFQDDKLRDDHNPFALNYMKGGIVYSNAVTTVSPNHALEAQYTDVGCGLGH
TLYLHKEKFSGVLNGIDYDFWNPEIDRHIPDNYSQDDFEQKLYNKKALRERLLLQAADKPIIAYIGRLDNQKGVHLVHHA
IYHALNKGAQFVLLGSATEAGINAHFRHEKQFLNSNPDVHLELGFNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYG
TVPIVRGVGGLVNTVFDRDYDQNLPPEKRNGYVFYQSDNQALESAMNRAIDLWYQSPEQFQQLAIQGMKYDYSWNNPGTE
YLNIYEWIKYKW

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789836, Length=504, Percent_Identity=31.547619047619, Blast_Score=227, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.21 [H]

Molecular weight: Translated: 56730; Mature: 56730

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIVQIASECAPVIKAGGLGDVVYGLSRELEIRGNCVELILPKYDCMRYDHVWGLHEAYL
CEEEEEHHHHHHHHHCCCCHHHHHCCCCCEEECCCEEEEEECCHHHHHHHHHCCHHHHHH
NLWVPWFGAAIHCTVYCGWVHGRVCFFIEPHSEDNFFNRGCYYGCDDDDMRFAFFSKAAL
HHHHHHHCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCCEECCCCCCCCCHHHHHHHHH
EFLHQSNKRPDIIHCHDWQTGLIPVMLYEIYKYHGMDTQRVCYTIHNFKHQGIGGVKTLW
HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHH
ATGLNREAYYFQDDKLRDDHNPFALNYMKGGIVYSNAVTTVSPNHALEAQYTDVGCGLGH
HCCCCCCEEEEECCCCCCCCCCEEEEEEECCEEEECEEEEECCCCCEEEEECCCCCCCCC
TLYLHKEKFSGVLNGIDYDFWNPEIDRHIPDNYSQDDFEQKLYNKKALRERLLLQAADKP
EEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IIAYIGRLDNQKGVHLVHHAIYHALNKGAQFVLLGSATEAGINAHFRHEKQFLNSNPDVH
CEEHEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEE
LELGFNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYGTVPIVRGVGGLVNTVFDRDY
EEECCCHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
DQNLPPEKRNGYVFYQSDNQALESAMNRAIDLWYQSPEQFQQLAIQGMKYDYSWNNPGTE
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCCCHH
YLNIYEWIKYKW
HHHHHHHHEECC
>Mature Secondary Structure
MYIVQIASECAPVIKAGGLGDVVYGLSRELEIRGNCVELILPKYDCMRYDHVWGLHEAYL
CEEEEEHHHHHHHHHCCCCHHHHHCCCCCEEECCCEEEEEECCHHHHHHHHHCCHHHHHH
NLWVPWFGAAIHCTVYCGWVHGRVCFFIEPHSEDNFFNRGCYYGCDDDDMRFAFFSKAAL
HHHHHHHCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCCEECCCCCCCCCHHHHHHHHH
EFLHQSNKRPDIIHCHDWQTGLIPVMLYEIYKYHGMDTQRVCYTIHNFKHQGIGGVKTLW
HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHH
ATGLNREAYYFQDDKLRDDHNPFALNYMKGGIVYSNAVTTVSPNHALEAQYTDVGCGLGH
HCCCCCCEEEEECCCCCCCCCCEEEEEEECCEEEECEEEEECCCCCEEEEECCCCCCCCC
TLYLHKEKFSGVLNGIDYDFWNPEIDRHIPDNYSQDDFEQKLYNKKALRERLLLQAADKP
EEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IIAYIGRLDNQKGVHLVHHAIYHALNKGAQFVLLGSATEAGINAHFRHEKQFLNSNPDVH
CEEHEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEE
LELGFNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYGTVPIVRGVGGLVNTVFDRDY
EEECCCHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
DQNLPPEKRNGYVFYQSDNQALESAMNRAIDLWYQSPEQFQQLAIQGMKYDYSWNNPGTE
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCCCHH
YLNIYEWIKYKW
HHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA