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The map label for this gene is yieM [H]

Identifier: 39546380

GI number: 39546380

Start: 4086305

End: 4087756

Strand: Reverse

Name: yieM [H]

Synonym: STM3878.S

Alternate gene names: 39546380

Gene position: 4087756-4086305 (Counterclockwise)

Preceding gene: 16767163

Following gene: 16767160

Centisome position: 84.15

GC content: 56.2

Gene sequence:

>1452_bases
ATGCTGACGCTGGATACGCTAAATACCATGCTGGCCGTCAGCGAAGAGGGAATGGTCGAAGAGATGATCCTCGCGCTACT
GGCTTCCCCACAACTGGTCATTTTCTTTGAAAAGTTTCCGCGTTTAAAAAACGCCGTGACCGCCGATCTCCCGCGCTGGC
GGGAAGCGCTACGCAGCCGTCTTAAAGACGCACGCGTTCCGCCGGAACTCACGGAAGAGGTCATGTGTTATCAGCAAAGC
CAACTTCTCTCTACCCCACAGTTCATCGTGCAACTGCCGCAAATACTGGCGTTGCTTCACCGCCTGCATTCACCGTATGC
CGCGCAGGCGAAGCAGTTGACGGAGAGCAACAGTACCTTTACCCCTGCGCTACACACGCTTTTTTTGCAACGCTGGCGGT
TAAGTCTGGTCGTGCAGGCCACCACGTTAAACCAACAACTACTGGAAGAAGAGCGCGAGCAGTTGCTGAGTGACGTTCAG
GAACGGATGACGCTGAGCGGGCAACTGGAACCGACGCTGGCGGAAAATGATAATGCCGCAGGCCGCCTGTGGGATATGAG
CGCGGGCCAGCTTAAACGTGGTGATTATCAACTGATCGTAAAATACGGCGAATTTCTCGCCGCCCAGCCGGAGCTAATGC
AACTGGCGGAACAACTGGGACGTTCGCGGGAAGCCAAATCGGTACCGAAAAAAGACGCGCCGATGGAAACCTTTCGTACA
CTGGTACGCGAACCCGCAACGGTGCCGGAGCAGGTTGACGGTATTCAGCAAGGCGATGATATTCTGCGCCTGTTGCCGCC
AGAGCTGGCGACGCTCGGCATCACCGAGCTGGAATATGAATTTTACCGCCGGTTAGTGGAAAAACAGCTCCTCACCTATC
GCCTGCATGGCGAAGCGTGGCGTGAGAAAGTGACCGAACGGCCGGTAGTACACCAGGATGTCGACGAGCAGCCGCGCGGA
CCGTTTATTGTCTGCGTCGATACTTCAGGCTCGATGGGAGGATTTAACGAGCAGTGCGCAAAAGCGTTCTGCCTGGCGTT
GATGCGCGTTGCGCTGGCGGATAACCGCCGCTGCTTTATTATGCTGTTTTCCACTGACGTTGTGCGCTATGAACTCTCCG
GCCCGGAAGGTATCGAGCAGGCCATCCGCTTTTTAAGTCAACGTTTTCGCGGCGGCACGGATATCGCCAGCTGTTTTCGC
GCCATTATTGAAAGAATGCAGGGACGGGAATGGTTTGATGCCGATGCGGTGGTCATTTCGGATTTTATCGCCCAGCGCTT
GCCGGATGACGTGGTGAGCAAAGTGGGAGAGTTGCAGCGTCTTCACCAGCATCGATTCCATGCGGTGGCGATGTCGGCGC
ACGGCAAACCCGGCATCATGCGCATTTTCGATCATATCTGGCGCTTTGACACCGGGATGCGAAGCCGCCTGCTGAGACGC
TGGCGGCGCTAA

Upstream 100 bases:

>100_bases
TCAGCGAACAGCAACATTGCCTGTTTATTCACAGCGACTGGTTAGGGCGCATTGAGGCCAGCCTGCAGGATGTAGGAGAA
CAGATCCGCCAGGCGAAACA

Downstream 100 bases:

>100_bases
CGGCTTATAAAATAGCAGGAATGCTTTCGCGAACCTGCGCGGGCCATACGCCGCACTGTACCTGACCAATATGCGGCAAT
TGCAGCAGCAACATCGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: VWA domain protein interacting with AAA ATPase [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MLTLDTLNTMLAVSEEGMVEEMILALLASPQLVIFFEKFPRLKNAVTADLPRWREALRSRLKDARVPPELTEEVMCYQQS
QLLSTPQFIVQLPQILALLHRLHSPYAAQAKQLTESNSTFTPALHTLFLQRWRLSLVVQATTLNQQLLEEEREQLLSDVQ
ERMTLSGQLEPTLAENDNAAGRLWDMSAGQLKRGDYQLIVKYGEFLAAQPELMQLAEQLGRSREAKSVPKKDAPMETFRT
LVREPATVPEQVDGIQQGDDILRLLPPELATLGITELEYEFYRRLVEKQLLTYRLHGEAWREKVTERPVVHQDVDEQPRG
PFIVCVDTSGSMGGFNEQCAKAFCLALMRVALADNRRCFIMLFSTDVVRYELSGPEGIEQAIRFLSQRFRGGTDIASCFR
AIIERMQGREWFDADAVVISDFIAQRLPDDVVSKVGELQRLHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGMRSRLLRR
WRR

Sequences:

>Translated_483_residues
MLTLDTLNTMLAVSEEGMVEEMILALLASPQLVIFFEKFPRLKNAVTADLPRWREALRSRLKDARVPPELTEEVMCYQQS
QLLSTPQFIVQLPQILALLHRLHSPYAAQAKQLTESNSTFTPALHTLFLQRWRLSLVVQATTLNQQLLEEEREQLLSDVQ
ERMTLSGQLEPTLAENDNAAGRLWDMSAGQLKRGDYQLIVKYGEFLAAQPELMQLAEQLGRSREAKSVPKKDAPMETFRT
LVREPATVPEQVDGIQQGDDILRLLPPELATLGITELEYEFYRRLVEKQLLTYRLHGEAWREKVTERPVVHQDVDEQPRG
PFIVCVDTSGSMGGFNEQCAKAFCLALMRVALADNRRCFIMLFSTDVVRYELSGPEGIEQAIRFLSQRFRGGTDIASCFR
AIIERMQGREWFDADAVVISDFIAQRLPDDVVSKVGELQRLHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGMRSRLLRR
WRR
>Mature_483_residues
MLTLDTLNTMLAVSEEGMVEEMILALLASPQLVIFFEKFPRLKNAVTADLPRWREALRSRLKDARVPPELTEEVMCYQQS
QLLSTPQFIVQLPQILALLHRLHSPYAAQAKQLTESNSTFTPALHTLFLQRWRLSLVVQATTLNQQLLEEEREQLLSDVQ
ERMTLSGQLEPTLAENDNAAGRLWDMSAGQLKRGDYQLIVKYGEFLAAQPELMQLAEQLGRSREAKSVPKKDAPMETFRT
LVREPATVPEQVDGIQQGDDILRLLPPELATLGITELEYEFYRRLVEKQLLTYRLHGEAWREKVTERPVVHQDVDEQPRG
PFIVCVDTSGSMGGFNEQCAKAFCLALMRVALADNRRCFIMLFSTDVVRYELSGPEGIEQAIRFLSQRFRGGTDIASCFR
AIIERMQGREWFDADAVVISDFIAQRLPDDVVSKVGELQRLHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGMRSRLLRR
WRR

Specific function: Unknown

COG id: COG2425

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the viaA family [H]

Homologues:

Organism=Escherichia coli, GI48994959, Length=473, Percent_Identity=88.3720930232558, Blast_Score=854, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008912
- InterPro:   IPR002035 [H]

Pfam domain/function: PF05762 VWA_CoxE [H]

EC number: NA

Molecular weight: Translated: 55432; Mature: 55432

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLDTLNTMLAVSEEGMVEEMILALLASPQLVIFFEKFPRLKNAVTADLPRWREALRSR
CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEHHHCCHHHHHHHHCCHHHHHHHHHH
LKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILALLHRLHSPYAAQAKQLTESNSTF
HHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
TPALHTLFLQRWRLSLVVQATTLNQQLLEEEREQLLSDVQERMTLSGQLEPTLAENDNAA
HHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GRLWDMSAGQLKRGDYQLIVKYGEFLAAQPELMQLAEQLGRSREAKSVPKKDAPMETFRT
CEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHH
LVREPATVPEQVDGIQQGDDILRLLPPELATLGITELEYEFYRRLVEKQLLTYRLHGEAW
HHHCCCCCHHHHCCHHCCCHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
REKVTERPVVHQDVDEQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALMRVALADNRRCFI
HHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
MLFSTDVVRYELSGPEGIEQAIRFLSQRFRGGTDIASCFRAIIERMQGREWFDADAVVIS
EEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
DFIAQRLPDDVVSKVGELQRLHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGMRSRLLRR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
WRR
HCC
>Mature Secondary Structure
MLTLDTLNTMLAVSEEGMVEEMILALLASPQLVIFFEKFPRLKNAVTADLPRWREALRSR
CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEHHHCCHHHHHHHHCCHHHHHHHHHH
LKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILALLHRLHSPYAAQAKQLTESNSTF
HHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
TPALHTLFLQRWRLSLVVQATTLNQQLLEEEREQLLSDVQERMTLSGQLEPTLAENDNAA
HHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GRLWDMSAGQLKRGDYQLIVKYGEFLAAQPELMQLAEQLGRSREAKSVPKKDAPMETFRT
CEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHH
LVREPATVPEQVDGIQQGDDILRLLPPELATLGITELEYEFYRRLVEKQLLTYRLHGEAW
HHHCCCCCHHHHCCHHCCCHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
REKVTERPVVHQDVDEQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALMRVALADNRRCFI
HHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
MLFSTDVVRYELSGPEGIEQAIRFLSQRFRGGTDIASCFRAIIERMQGREWFDADAVVIS
EEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
DFIAQRLPDDVVSKVGELQRLHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGMRSRLLRR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
WRR
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA