| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is yieN [H]
Identifier: 16767163
GI number: 16767163
Start: 4087750
End: 4089246
Strand: Reverse
Name: yieN [H]
Synonym: STM3879
Alternate gene names: 16767163
Gene position: 4089246-4087750 (Counterclockwise)
Preceding gene: 16767171
Following gene: 39546380
Centisome position: 84.19
GC content: 53.57
Gene sequence:
>1497_bases ATGGCTCACCCACATTTATTAGCGGAAAGAATTTCCCGTCTGAGCAGCGCCCTTGAGAAGGGGCTGTATGAACGTAGTCA TGCCATACGCCTTTGCCTACTGGCGGCGTTAAGCGGTGAGAGCGTCTTTTTGTTGGGCCCGCCCGGTATCGCCAAGAGTC TGATTGCCCGCCGCCTGAAGTTTGCTTTCCAGCGCGCCCGCGCTTTTGAATATCTGATGACACGCTTTTCCACGCCGGAA GAGGTTTTTGGCCCGCTCTCTATTCAGGCGCTGAAAGATGAAGGTCGCTATGAACGCTTAACGACCGGCTACCTTCCCGA AGCCGAAATCGTTTTTCTGGATGAAATCTGGAAAGCCGGGCCAGCTATCCTGAACACATTGCTGACCGCCATTAACGAAC GCCATTTCCGCAACGGCGCATTTGAGGAAAAAATTCCGATGCGGCTGCTGGTGGCGGCCTCTAACGAACTGCCCGAAGCG GACAGCAGCCTGGAAGCGTTGTACGACCGAATGTTGATTCGCCTGTGGCTGGATAAAGTTCAGGATAAAGCCAATTTCCG CTCCATGCTGGTCAGTCAGCAGGATGAAAGTGATAACCCGGTACCTGCCTCGTTACAGGTTAGCGACGAAGAATATCAAC AGTGGCAAAAGGATATCGGCGCGATTTCACTCCCTGATCCGGTCTTTGAGCTGATATTTACTCTGCGCCAACAGCTGGAT AATTTGCCGAATGCGCCTTATGTCTCCGACCGTCGCTGGAAGAAAGCCATCCGCCTGTTACAGGCCAGCGCCTTCTTTAG CGGACGCGACGCGGTTGCGCCGATTGACCTTATCCTGCTAAAAGATTGCTTGTGGTATGACGCGCAGAGTCTGAATCTCA TGCAACAGCAACTGGAAATATTGATGACCGGACACGCCTGGCAGCAGCAGGCCATGCTGACTCGCCTCGGCGGTATCGTC CAGCGTCGCCTTCAGTTGCAGCAACAGCAAAGCGATAAAACCGCCTTCACCGTCATTAAAGAAGGCGGTATGTTCAGCCG TCGCCCGCATTACACTTTACCGCCGGAAGCCAGTGCGTCAACGTTGACGTTATTGCTACAAAAACCGCTCAAATTGCATG ATATGGAAGTGATCCATATTACCTTTGACCGCAGCGCGCTGGAACTTTGGCTGACCAAAGGCGGCGAGATCCGCGGCAAA CTGAACGGGATCGGCTTTGCCCAAACGCTGAATATGGAAGTCGATAACGCTCAACATCTGGTGGTGCGCGACATCAGTCT ACAAGGTACCCGTCTGGCGTTACCGGGAACGGCTGAAGACAGTATGCCTGCGGAGATCAAACAGCAGCTGGAAACGTTAG AAAACGACTGGCGCCAGCAGCATACCCGCTTCAGCGAACAGCAACATTGCCTGTTTATTCACAGCGACTGGTTAGGGCGC ATTGAGGCCAGCCTGCAGGATGTAGGAGAACAGATCCGCCAGGCGAAACAATGCTGA
Upstream 100 bases:
>100_bases AAGAAAAATAAACAGCGCGTCAGACGATTACAGCCCCGGTGGTGAAACGTCTATACTCGCAATTAGCATGATCCATTTGT CGAAAGGACGCCTCTTTATT
Downstream 100 bases:
>100_bases CGCTGGATACGCTAAATACCATGCTGGCCGTCAGCGAAGAGGGAATGGTCGAAGAGATGATCCTCGCGCTACTGGCTTCC CCACAACTGGTCATTTTCTT
Product: regulatory ATPase RavA
Products: NA
Alternate protein names: Regulatory ATPase variant A [H]
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MAHPHLLAERISRLSSALEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLKFAFQRARAFEYLMTRFSTPE EVFGPLSIQALKDEGRYERLTTGYLPEAEIVFLDEIWKAGPAILNTLLTAINERHFRNGAFEEKIPMRLLVAASNELPEA DSSLEALYDRMLIRLWLDKVQDKANFRSMLVSQQDESDNPVPASLQVSDEEYQQWQKDIGAISLPDPVFELIFTLRQQLD NLPNAPYVSDRRWKKAIRLLQASAFFSGRDAVAPIDLILLKDCLWYDAQSLNLMQQQLEILMTGHAWQQQAMLTRLGGIV QRRLQLQQQQSDKTAFTVIKEGGMFSRRPHYTLPPEASASTLTLLLQKPLKLHDMEVIHITFDRSALELWLTKGGEIRGK LNGIGFAQTLNMEVDNAQHLVVRDISLQGTRLALPGTAEDSMPAEIKQQLETLENDWRQQHTRFSEQQHCLFIHSDWLGR IEASLQDVGEQIRQAKQC
Sequences:
>Translated_498_residues MAHPHLLAERISRLSSALEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLKFAFQRARAFEYLMTRFSTPE EVFGPLSIQALKDEGRYERLTTGYLPEAEIVFLDEIWKAGPAILNTLLTAINERHFRNGAFEEKIPMRLLVAASNELPEA DSSLEALYDRMLIRLWLDKVQDKANFRSMLVSQQDESDNPVPASLQVSDEEYQQWQKDIGAISLPDPVFELIFTLRQQLD NLPNAPYVSDRRWKKAIRLLQASAFFSGRDAVAPIDLILLKDCLWYDAQSLNLMQQQLEILMTGHAWQQQAMLTRLGGIV QRRLQLQQQQSDKTAFTVIKEGGMFSRRPHYTLPPEASASTLTLLLQKPLKLHDMEVIHITFDRSALELWLTKGGEIRGK LNGIGFAQTLNMEVDNAQHLVVRDISLQGTRLALPGTAEDSMPAEIKQQLETLENDWRQQHTRFSEQQHCLFIHSDWLGR IEASLQDVGEQIRQAKQC >Mature_497_residues AHPHLLAERISRLSSALEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLKFAFQRARAFEYLMTRFSTPEE VFGPLSIQALKDEGRYERLTTGYLPEAEIVFLDEIWKAGPAILNTLLTAINERHFRNGAFEEKIPMRLLVAASNELPEAD SSLEALYDRMLIRLWLDKVQDKANFRSMLVSQQDESDNPVPASLQVSDEEYQQWQKDIGAISLPDPVFELIFTLRQQLDN LPNAPYVSDRRWKKAIRLLQASAFFSGRDAVAPIDLILLKDCLWYDAQSLNLMQQQLEILMTGHAWQQQAMLTRLGGIVQ RRLQLQQQQSDKTAFTVIKEGGMFSRRPHYTLPPEASASTLTLLLQKPLKLHDMEVIHITFDRSALELWLTKGGEIRGKL NGIGFAQTLNMEVDNAQHLVVRDISLQGTRLALPGTAEDSMPAEIKQQLETLENDWRQQHTRFSEQQHCLFIHSDWLGRI EASLQDVGEQIRQAKQC
Specific function: Functions as an ATPase. May play a role in metal insertion (metal-chelatase) or as a chaperone [H]
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ravA family [H]
Homologues:
Organism=Escherichia coli, GI87082326, Length=498, Percent_Identity=86.3453815261044, Blast_Score=876, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR022547 [H]
Pfam domain/function: PF07728 AAA_5; PF12592 DUF3763 [H]
EC number: NA
Molecular weight: Translated: 56704; Mature: 56573
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPHLLAERISRLSSALEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH FAFQRARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTTGYLPEAEIVFLDEIWKAG HHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCHHHHHCCCCCCCCEEEHHHHHCCC PAILNTLLTAINERHFRNGAFEEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKV HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH QDKANFRSMLVSQQDESDNPVPASLQVSDEEYQQWQKDIGAISLPDPVFELIFTLRQQLD HHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH NLPNAPYVSDRRWKKAIRLLQASAFFSGRDAVAPIDLILLKDCLWYDAQSLNLMQQQLEI CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH LMTGHAWQQQAMLTRLGGIVQRRLQLQQQQSDKTAFTVIKEGGMFSRRPHYTLPPEASAS HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCHH TLTLLLQKPLKLHDMEVIHITFDRSALELWLTKGGEIRGKLNGIGFAQTLNMEVDNAQHL HHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCEE VVRDISLQGTRLALPGTAEDSMPAEIKQQLETLENDWRQQHTRFSEQQHCLFIHSDWLGR EEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH IEASLQDVGEQIRQAKQC HHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHPHLLAERISRLSSALEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH FAFQRARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTTGYLPEAEIVFLDEIWKAG HHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCHHHHHCCCCCCCCEEEHHHHHCCC PAILNTLLTAINERHFRNGAFEEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKV HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH QDKANFRSMLVSQQDESDNPVPASLQVSDEEYQQWQKDIGAISLPDPVFELIFTLRQQLD HHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH NLPNAPYVSDRRWKKAIRLLQASAFFSGRDAVAPIDLILLKDCLWYDAQSLNLMQQQLEI CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH LMTGHAWQQQAMLTRLGGIVQRRLQLQQQQSDKTAFTVIKEGGMFSRRPHYTLPPEASAS HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCHH TLTLLLQKPLKLHDMEVIHITFDRSALELWLTKGGEIRGKLNGIGFAQTLNMEVDNAQHL HHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCEE VVRDISLQGTRLALPGTAEDSMPAEIKQQLETLENDWRQQHTRFSEQQHCLFIHSDWLGR EEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH IEASLQDVGEQIRQAKQC HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA