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The map label for this gene is stjC [H]

Identifier: 16767814

GI number: 16767814

Start: 4828889

End: 4829596

Strand: Reverse

Name: stjC [H]

Synonym: STM4573

Alternate gene names: 16767814

Gene position: 4829596-4828889 (Counterclockwise)

Preceding gene: 16767815

Following gene: 16767813

Centisome position: 99.43

GC content: 45.62

Gene sequence:

>708_bases
ATGCCAGCAGTGACTAAACTTCCATTATTATTACTCAGCGTCCCCTTTGTTTTTTCAACACTCTTTTCACAGGCTAACGC
TGCCGGCATGGTACCGGAAACTACGCTACTGGTGATTGAAGAATCCACACACAGCGGCGTAATGAATGTTAAAAACACCG
ACAGCAATCCGGCTTTGTTATATACCACCGTCGTTGATTTACCTGACGACAATGGTGTGAAACTGGATGTCACTCAACCA
GTTGTTCGCGTTGAAGCAGGCCAGCAGCAGCAACTACGCTTTATTATGGAAAGTACGGAACCGCTCACCGTCGAGCACTA
TAAGCGCGTCACGTTTGAAGGTATTCCTCCGAAATCTACCGATAAAGGAATGAAAATAGGTTTTAATCTACGCCAGGATT
TGCCGGTATTAATTCGTCCTAAAAATCTACCGGTCGTTACTGATGCCTGGAAATTATTAACCTGGTCCAGAAACGGACAA
ACAATCAACGTCAAAAATCCGTCTCCCTACGTTGTACGTTTAGCCCAAAATATTACCTTCTTACCTTCCGGGGGCGAAGG
CACGATTAAAAAAACCTATATTCTGCCCGGCGAAACATTGAACGTCAGTATAAAAACGCCCTTTGCTGCTGATACATCCG
TACGTTTTTATCCTGCCAGCCGTTACGGCATTGAAGTCCCCAGCTTTACCTCACCGCTGGTGCCGTAA

Upstream 100 bases:

>100_bases
CCATCACGCTTAAATATCTCTGATCCAGACCGTGTAAAAAGGTTATTGATCTGTCTCCCTTATTATGGGGAGACAGATTA
AAATTAAAGGACTAATTCTG

Downstream 100 bases:

>100_bases
TGAGAGCTAGCACGTGAAGTATTTAAAACTGCCGCTATACATCAAAACTGCGCTTTATTGCTCACTGGCAACCACGACGT
TTTCAGCTCTGGCGGAGGAG

Product: periplasmic chaperone protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MPAVTKLPLLLLSVPFVFSTLFSQANAAGMVPETTLLVIEESTHSGVMNVKNTDSNPALLYTTVVDLPDDNGVKLDVTQP
VVRVEAGQQQQLRFIMESTEPLTVEHYKRVTFEGIPPKSTDKGMKIGFNLRQDLPVLIRPKNLPVVTDAWKLLTWSRNGQ
TINVKNPSPYVVRLAQNITFLPSGGEGTIKKTYILPGETLNVSIKTPFAADTSVRFYPASRYGIEVPSFTSPLVP

Sequences:

>Translated_235_residues
MPAVTKLPLLLLSVPFVFSTLFSQANAAGMVPETTLLVIEESTHSGVMNVKNTDSNPALLYTTVVDLPDDNGVKLDVTQP
VVRVEAGQQQQLRFIMESTEPLTVEHYKRVTFEGIPPKSTDKGMKIGFNLRQDLPVLIRPKNLPVVTDAWKLLTWSRNGQ
TINVKNPSPYVVRLAQNITFLPSGGEGTIKKTYILPGETLNVSIKTPFAADTSVRFYPASRYGIEVPSFTSPLVP
>Mature_234_residues
PAVTKLPLLLLSVPFVFSTLFSQANAAGMVPETTLLVIEESTHSGVMNVKNTDSNPALLYTTVVDLPDDNGVKLDVTQPV
VRVEAGQQQQLRFIMESTEPLTVEHYKRVTFEGIPPKSTDKGMKIGFNLRQDLPVLIRPKNLPVVTDAWKLLTWSRNGQT
INVKNPSPYVVRLAQNITFLPSGGEGTIKKTYILPGETLNVSIKTPFAADTSVRFYPASRYGIEVPSFTSPLVP

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1789609, Length=216, Percent_Identity=50.9259259259259, Blast_Score=213, Evalue=6e-57,
Organism=Escherichia coli, GI1789532, Length=227, Percent_Identity=26.8722466960352, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR016148
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 25852; Mature: 25721

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVTKLPLLLLSVPFVFSTLFSQANAAGMVPETTLLVIEESTHSGVMNVKNTDSNPALL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCEEE
YTTVVDLPDDNGVKLDVTQPVVRVEAGQQQQLRFIMESTEPLTVEHYKRVTFEGIPPKST
EEEEEECCCCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCEEHHHEEEEEECCCCCCCC
DKGMKIGFNLRQDLPVLIRPKNLPVVTDAWKLLTWSRNGQTINVKNPSPYVVRLAQNITF
CCCEEEEEECCCCCCEEEECCCCCEEECCEEEEEECCCCCEEEECCCCCEEEEEECCEEE
LPSGGEGTIKKTYILPGETLNVSIKTPFAADTSVRFYPASRYGIEVPSFTSPLVP
EECCCCCCEEEEEEECCCEEEEEEECCCCCCCEEEEEECCCCCEECCCCCCCCCC
>Mature Secondary Structure 
PAVTKLPLLLLSVPFVFSTLFSQANAAGMVPETTLLVIEESTHSGVMNVKNTDSNPALL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCEEE
YTTVVDLPDDNGVKLDVTQPVVRVEAGQQQQLRFIMESTEPLTVEHYKRVTFEGIPPKST
EEEEEECCCCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCEEHHHEEEEEECCCCCCCC
DKGMKIGFNLRQDLPVLIRPKNLPVVTDAWKLLTWSRNGQTINVKNPSPYVVRLAQNITF
CCCEEEEEECCCCCCEEEECCCCCEEECCEEEEEECCCCCEEEECCCCCEEEEEECCEEE
LPSGGEGTIKKTYILPGETLNVSIKTPFAADTSVRFYPASRYGIEVPSFTSPLVP
EECCCCCCEEEEEEECCCEEEEEEECCCCCCCEEEEEECCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1447980; 9278503 [H]