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The map label for this gene is yhcF [H]

Identifier: 16767815

GI number: 16767815

Start: 4829674

End: 4830363

Strand: Reverse

Name: yhcF [H]

Synonym: STM4574

Alternate gene names: 16767815

Gene position: 4830363-4829674 (Counterclockwise)

Preceding gene: 16767816

Following gene: 16767814

Centisome position: 99.44

GC content: 47.83

Gene sequence:

>690_bases
ATGAAAAAAATTTTGCTTATTACTGCAATTGCAGCTTCCTTTGCTACAACCAGCGTGAATGCTGACACTACTGCCGTATT
AAAAGTCACCGGTCAACTGGTTGTTGGTGGTTGTACCCCAGAACTCAGCGGCGGCGGCGTGGTTGATTACGGTACTATCC
GCCTCGCCACACTTTCCGCAACCGATGTAAACCAACTGGGTACTAAAGATGTCTCTCTGAGTATCTCTTGTCCGTCTGCA
ACCAAAGCAGCATGGACTATTACCGATGACCGTGCGGACACCCACCCAGGCGCATCCGTTATCTCCATAGCCAATGGCGA
TATGACTAATAGTATAGTATCTGATACCACAATGTCCTACGGCGTTGGCAAAACAACCGAAGGTGTAAAAATCGGCGCGT
TCTCTATTTATACCGATACCGCGAACGTTACCGCTGATGGTGTAAAATCTGACGCTATCTCAGGAACCGTTGATAGCCCA
GTCTGGCAGAAGTCTTCCACCGGGATTATCAAAAACGGCAATATGGAAATGTTTACCGTTGCTACAAAAGGCACCACCGA
ACCGGTTCCGTATACCCTCGCCATTTTCCCGCTGAAAACCTCACTGGCTATTCAGAATACTGCAACGCTGGCCATTACTG
ATGATACTGATCTGGATGGTCAGGCAACCATCACGCTTAAATATCTCTGA

Upstream 100 bases:

>100_bases
CCGATAACACCACGCTTGATGGTCAGGCGACCTTTACACTCGTATATCTGTAACTCCAGCATTCACATGGAATATTCAAC
ACCTCTTTAATGGAACTATA

Downstream 100 bases:

>100_bases
TCCAGACCGTGTAAAAAGGTTATTGATCTGTCTCCCTTATTATGGGGAGACAGATTAAAATTAAAGGACTAATTCTGATG
CCAGCAGTGACTAAACTTCC

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKKILLITAIAASFATTSVNADTTAVLKVTGQLVVGGCTPELSGGGVVDYGTIRLATLSATDVNQLGTKDVSLSISCPSA
TKAAWTITDDRADTHPGASVISIANGDMTNSIVSDTTMSYGVGKTTEGVKIGAFSIYTDTANVTADGVKSDAISGTVDSP
VWQKSSTGIIKNGNMEMFTVATKGTTEPVPYTLAIFPLKTSLAIQNTATLAITDDTDLDGQATITLKYL

Sequences:

>Translated_229_residues
MKKILLITAIAASFATTSVNADTTAVLKVTGQLVVGGCTPELSGGGVVDYGTIRLATLSATDVNQLGTKDVSLSISCPSA
TKAAWTITDDRADTHPGASVISIANGDMTNSIVSDTTMSYGVGKTTEGVKIGAFSIYTDTANVTADGVKSDAISGTVDSP
VWQKSSTGIIKNGNMEMFTVATKGTTEPVPYTLAIFPLKTSLAIQNTATLAITDDTDLDGQATITLKYL
>Mature_229_residues
MKKILLITAIAASFATTSVNADTTAVLKVTGQLVVGGCTPELSGGGVVDYGTIRLATLSATDVNQLGTKDVSLSISCPSA
TKAAWTITDDRADTHPGASVISIANGDMTNSIVSDTTMSYGVGKTTEGVKIGAFSIYTDTANVTADGVKSDAISGTVDSP
VWQKSSTGIIKNGNMEMFTVATKGTTEPVPYTLAIFPLKTSLAIQNTATLAITDDTDLDGQATITLKYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli gltF [H]

Homologues:

Organism=Escherichia coli, GI1789613, Length=245, Percent_Identity=32.6530612244898, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1789608, Length=260, Percent_Identity=30.3846153846154, Blast_Score=85, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010546 [H]

Pfam domain/function: PF06551 DUF1120 [H]

EC number: NA

Molecular weight: Translated: 23540; Mature: 23540

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILLITAIAASFATTSVNADTTAVLKVTGQLVVGGCTPELSGGGVVDYGTIRLATLSA
CCEEEEEEEEHHHHEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCEEEECEEEEEEEEC
TDVNQLGTKDVSLSISCPSATKAAWTITDDRADTHPGASVISIANGDMTNSIVSDTTMSY
CCHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEC
GVGKTTEGVKIGAFSIYTDTANVTADGVKSDAISGTVDSPVWQKSSTGIIKNGNMEMFTV
CCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEE
ATKGTTEPVPYTLAIFPLKTSLAIQNTATLAITDDTDLDGQATITLKYL
EECCCCCCCCEEEEEEEEEEEEEEECCEEEEEECCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKKILLITAIAASFATTSVNADTTAVLKVTGQLVVGGCTPELSGGGVVDYGTIRLATLSA
CCEEEEEEEEHHHHEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCEEEECEEEEEEEEC
TDVNQLGTKDVSLSISCPSATKAAWTITDDRADTHPGASVISIANGDMTNSIVSDTTMSY
CCHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEC
GVGKTTEGVKIGAFSIYTDTANVTADGVKSDAISGTVDSPVWQKSSTGIIKNGNMEMFTV
CCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEE
ATKGTTEPVPYTLAIFPLKTSLAIQNTATLAITDDTDLDGQATITLKYL
EECCCCCCCCEEEEEEEEEEEEEEECCEEEEEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]