| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16767766
Identifier: 16767766
GI number: 16767766
Start: 4776272
End: 4776973
Strand: Reverse
Name: 16767766
Synonym: STM4522
Alternate gene names: NA
Gene position: 4776973-4776272 (Counterclockwise)
Preceding gene: 16767767
Following gene: 16767764
Centisome position: 98.34
GC content: 29.91
Gene sequence:
>702_bases ATGCGGCTAAAAGTAAAAGAAAACATTACGCTTTGGAGAAATGAAGGTTTAATTGCTTATGTCGCCCTTGGATTTCTATG TACTTTTTTTATGGAGGTCAACGCTCTATTACCATACTATCTTCAGCAAAGTATATTTTTCGAAACGCTGATGAGCTACA TGGCCTTCAATACGTTATTTTCGCTTGCTTTATCTGAGATTTTTTTTGCGATGTTGGTAGTTATTTGTCATAACACTAAA CTGGAAAAGATCACAAATAGTATTTTGCAAGAGTTGCATAAAAGAATTATGCAAGGTTCTTTCATTATATCCTTCTTATG CTTCGGAATATTTCTATTTTGTGTGATGGCATTCTGTATTGATTCGCTAACAATAAATAATAATTACTATGGGAAACATG TCATAAATTTTGCTTGCCCATTTGTTTTATTTCTATCTTTTCCTTATCTTATACATAAGGGTATAACAATCCTGTGTACT CTATTAAAAGCATTTCCCAAACACAAAATTCATGCAGCAATAATAATATTATTGATAATTGCAGCAGCGATTATCATCCC TGGCATATTTAACAAAAAAGAAAAAATGACTATAACCATTGATAAGGAAAAATATCATGCGATTGAGCAAAAAACCAAAA TAAAACCAGAAAAATACATTGAGAAAAAGATTAATGATATTAATATAAATGATATAAAATAG
Upstream 100 bases:
>100_bases ATCGACGTGATGGCAGGTTCTAAGTAAACGCATAAAATAAGCTGGCAAAGAACCCTTGCCAGCTTTAATTATAATTCATA TCAATGAGTGAAGGAAAATC
Downstream 100 bases:
>100_bases TGAGCACGCATAACATAAGGGCATAGTAATATATCATAAAATCCTTTAATTACTATTGCCCTTGAATAGATTCACTATTC CACATCCTTCCTTTCCAACC
Product: inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MRLKVKENITLWRNEGLIAYVALGFLCTFFMEVNALLPYYLQQSIFFETLMSYMAFNTLFSLALSEIFFAMLVVICHNTK LEKITNSILQELHKRIMQGSFIISFLCFGIFLFCVMAFCIDSLTINNNYYGKHVINFACPFVLFLSFPYLIHKGITILCT LLKAFPKHKIHAAIIILLIIAAAIIIPGIFNKKEKMTITIDKEKYHAIEQKTKIKPEKYIEKKINDININDIK
Sequences:
>Translated_233_residues MRLKVKENITLWRNEGLIAYVALGFLCTFFMEVNALLPYYLQQSIFFETLMSYMAFNTLFSLALSEIFFAMLVVICHNTK LEKITNSILQELHKRIMQGSFIISFLCFGIFLFCVMAFCIDSLTINNNYYGKHVINFACPFVLFLSFPYLIHKGITILCT LLKAFPKHKIHAAIIILLIIAAAIIIPGIFNKKEKMTITIDKEKYHAIEQKTKIKPEKYIEKKINDININDIK >Mature_233_residues MRLKVKENITLWRNEGLIAYVALGFLCTFFMEVNALLPYYLQQSIFFETLMSYMAFNTLFSLALSEIFFAMLVVICHNTK LEKITNSILQELHKRIMQGSFIISFLCFGIFLFCVMAFCIDSLTINNNYYGKHVINFACPFVLFLSFPYLIHKGITILCT LLKAFPKHKIHAAIIILLIIAAAIIIPGIFNKKEKMTITIDKEKYHAIEQKTKIKPEKYIEKKINDININDIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26999; Mature: 26999
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKVKENITLWRNEGLIAYVALGFLCTFFMEVNALLPYYLQQSIFFETLMSYMAFNTLF CCEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLALSEIFFAMLVVICHNTKLEKITNSILQELHKRIMQGSFIISFLCFGIFLFCVMAFCI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSLTINNNYYGKHVINFACPFVLFLSFPYLIHKGITILCTLLKAFPKHKIHAAIIILLII HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AAAIIIPGIFNKKEKMTITIDKEKYHAIEQKTKIKPEKYIEKKINDININDIK HHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRLKVKENITLWRNEGLIAYVALGFLCTFFMEVNALLPYYLQQSIFFETLMSYMAFNTLF CCEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLALSEIFFAMLVVICHNTKLEKITNSILQELHKRIMQGSFIISFLCFGIFLFCVMAFCI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSLTINNNYYGKHVINFACPFVLFLSFPYLIHKGITILCTLLKAFPKHKIHAAIIILLII HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AAAIIIPGIFNKKEKMTITIDKEKYHAIEQKTKIKPEKYIEKKINDININDIK HHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA