| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is mutL [H]
Identifier: 16767605
GI number: 16767605
Start: 4601693
End: 4603549
Strand: Direct
Name: mutL [H]
Synonym: STM4359
Alternate gene names: 16767605
Gene position: 4601693-4603549 (Clockwise)
Preceding gene: 16767604
Following gene: 16767606
Centisome position: 94.74
GC content: 58.21
Gene sequence:
>1857_bases ATGCCGATTCAGGTTCTGCCGCCGCAGCTTGCGAACCAAATCGCCGCTGGCGAAGTGGTGGAACGCCCTGCGTCGGTTGT TAAAGAGCTGGTAGAGAATAGTCTGGATGCAGGCGCCACCCGCGTTGATATCGACATCGAGCGTGGCGGCGCGAAGCTTA TTCGTATTCGCGACAATGGCTGCGGCATTAAAAAAGAGGAGCTGGCGCTGGCGCTGGCCCGTCATGCCACCAGTAAAATC GCCTCGCTTGACGATCTGGAAGCGATTATCAGTCTGGGATTTCGCGGCGAAGCGCTGGCCAGTATCAGTTCGGTCTCGCG TTTGACGCTAACGTCGCGCACGGCGGAGCAGGCGGAAGCCTGGCAGGCGTATGCGGAAGGGCGCGATATGGACGTGACGG TAAAACCCGCCGCGCACCCGGTCGGCACCACCCTGGAAGTTCTGGATCTCTTTTACAATACGCCCGCCCGGCGCAAATTC ATGCGTACCGAAAAAACGGAATTTAATCACATCGATGAGATCATCCGTCGTATTGCATTGGCCCGTTTTGACGTCACGCT TAACCTGTCGCACAACGGCAAATTGGTACGGCAGTATCGCGCTGTCGCAAAGGACGGGCAAAAAGAGCGCCGGTTAGGCG CCATCTGCGGCACGCCGTTTCTCGAACAGGCACTGGCGATCGAGTGGCAGCATGGCGATCTGACCCTGCGCGGCTGGGTC GCCGATCCGAATCACACCACCACGGCGTTAACGGAGATCCAGTACTGTTATGTGAATGGCCGCATGATGCGCGACCGCTT GATCAACCATGCCATTCGCCAGGCCTGTGAAGATAAACTGGGCGCGGACCAACAGCCTGCGTTTGTGCTGTATCTGGAGA TTGACCCGCATCAGGTGGATGTCAATGTTCATCCCGCCAAGCACGAAGTGCGTTTTCATCAATCCCGGCTGGTGCACGAC TTCATCTATCAAGGGGTGCTGAGCGTTCTGCAACAGCAGACGGAAACGGCGCTGCCGCTGGAGGAGATTGCGCCAGCGCC GCGGCATGTCCAGGAAAACCGTATCGCCGCCGGGCGCAACCATTTTGCTGTACCCGCCGAGCCAACTGCGGCGCGCGAGC CCGCGACACCGCGTTATTCCGGCGGCGCATCGGGCGGTAACGGCGGGCGTCAGTCCGCAGGTGGTTGGCCGCACGCGCAG CCAGGTTATCAGAAGCAGCAGGGCGAGGTTTATCGCACGCTTTTACAGACGCCGACGGCGAGCCCCGCGCCGGAGTCGGT TACGCCTGCGCTTGACGGACATAGCCAGAGTTTCGGTCGCGTACTGACAATAGTCGGCGGTGACTGCGCGTTGCTGGAAC ACGCGGGGACTATCCAGCTCTTGTCGCTACCGGTTGCGGAGCGTTGGCTGCGTCAGGCGCAGCTTACACCGGGTCAAAGT CCGGTTTGCGCGCAGCCGTTGCTGATTCCGCTGCGTTTAAAAGTGAGCGCCGATGAAAAAGCCGCGCTGCAAAAAGCCCA ATCTTTGTTGGGAGAATTGGGTATTGAATTTCAGTCAGATGCGCAGCATGTGACCATTCGGGCGGTGCCTTTACCCTTAC GACAACAAAATTTACAAATCTTGATTCCTGAACTGATAGGCTACCTGGCGCAACAGACCACATTTGCAACGGTCAATATT GCACAATGGATAGCGCGTAATGTGCAGAGCGAACATCCGCAGTGGTCGATGGCGCAGGCCATATCGCTGCTGGCGGATGT TGAGCGGCTATGTCCGCAGCTGGTAAAAGCGCCGCCGGGTGGCCTGTTACAACCTGTTGATTTACATTCGGCGATGAACG CCCTGAAGCATGAATGA
Upstream 100 bases:
>100_bases TGCAGCGCATCCGATCCAGTCTGCGCCGCAGGGCGGCCCAGGCCAGACGGCCAGTACCAACCAGCCTGGCGCCATAACCG CCGCGAATTAAGGAGATTTC
Downstream 100 bases:
>100_bases TGTAAGCAAGGCGAGCCTGCCTAAGGCGATATTTTTGATGGGGCCGACGGCCTCCGGCAAAACGGCGCTGGCGATAGAAC TGCGTAAAGTTTTGCCAGTA
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 617
Protein sequence:
>618_residues MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALARHATSKI ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKF MRTEKTEFNHIDEIIRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHD FIYQGVLSVLQQQTETALPLEEIAPAPRHVQENRIAAGRNHFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQ PGYQKQQGEVYRTLLQTPTASPAPESVTPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQLTPGQS PVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAQQTTFATVNI AQWIARNVQSEHPQWSMAQAISLLADVERLCPQLVKAPPGGLLQPVDLHSAMNALKHE
Sequences:
>Translated_618_residues MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALARHATSKI ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKF MRTEKTEFNHIDEIIRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHD FIYQGVLSVLQQQTETALPLEEIAPAPRHVQENRIAAGRNHFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQ PGYQKQQGEVYRTLLQTPTASPAPESVTPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQLTPGQS PVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAQQTTFATVNI AQWIARNVQSEHPQWSMAQAISLLADVERLCPQLVKAPPGGLLQPVDLHSAMNALKHE >Mature_617_residues PIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCGIKKEELALALARHATSKIA SLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFM RTEKTEFNHIDEIIRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWVA DPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDF IYQGVLSVLQQQTETALPLEEIAPAPRHVQENRIAAGRNHFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQP GYQKQQGEVYRTLLQTPTASPAPESVTPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQLTPGQSP VCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAQQTTFATVNIA QWIARNVQSEHPQWSMAQAISLLADVERLCPQLVKAPPGGLLQPVDLHSAMNALKHE
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=339, Percent_Identity=35.1032448377581, Blast_Score=206, Evalue=8e-53, Organism=Homo sapiens, GI4505911, Length=318, Percent_Identity=31.4465408805031, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI189458898, Length=318, Percent_Identity=31.4465408805031, Blast_Score=153, Evalue=6e-37, Organism=Homo sapiens, GI189458896, Length=316, Percent_Identity=31.0126582278481, Blast_Score=137, Evalue=4e-32, Organism=Homo sapiens, GI4505913, Length=333, Percent_Identity=27.3273273273273, Blast_Score=129, Evalue=8e-30, Organism=Homo sapiens, GI310128478, Length=333, Percent_Identity=27.3273273273273, Blast_Score=129, Evalue=9e-30, Organism=Homo sapiens, GI263191589, Length=245, Percent_Identity=29.7959183673469, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI310128480, Length=295, Percent_Identity=24.0677966101695, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI91992162, Length=362, Percent_Identity=24.8618784530387, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI91992160, Length=362, Percent_Identity=24.8618784530387, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1790612, Length=622, Percent_Identity=85.6913183279743, Blast_Score=1066, Evalue=0.0, Organism=Caenorhabditis elegans, GI71991825, Length=323, Percent_Identity=37.4613003095975, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17562796, Length=346, Percent_Identity=26.0115606936416, Blast_Score=119, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6323819, Length=319, Percent_Identity=35.1097178683386, Blast_Score=182, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6324247, Length=365, Percent_Identity=27.1232876712329, Blast_Score=110, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6325093, Length=293, Percent_Identity=25.2559726962457, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6323063, Length=470, Percent_Identity=25.1063829787234, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI17136968, Length=333, Percent_Identity=34.2342342342342, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI17136970, Length=359, Percent_Identity=27.0194986072423, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 67763; Mature: 67632
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCC CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL HHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHH ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV HHEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHEEEEECCCEEEEEEE ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD CCCCCCHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEE VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETALPLEEIAPAPRHVQENRIAAGRN EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHCCHHCCCC HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRTLLQTPTA CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC SPAPESVTPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQLTPGQS CCCCCCCCCCCCCCCCCCCCEEEEECCCEEEHHCCCCEEEEECHHHHHHHHHHCCCCCCC PVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQSDAQHVTIRAVPLPLRQQNLQI CCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEE LIPELIGYLAQQTTFATVNIAQWIARNVQSEHPQWSMAQAISLLADVERLCPQLVKAPPG EHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GLLQPVDLHSAMNALKHE CCCCCHHHHHHHHHHCCC >Mature Secondary Structure PIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCC CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL HHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHH ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV HHEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHEEEEECCCEEEEEEE ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD CCCCCCHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEE VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETALPLEEIAPAPRHVQENRIAAGRN EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHCCHHCCCC HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRTLLQTPTA CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC SPAPESVTPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQLTPGQS CCCCCCCCCCCCCCCCCCCCEEEEECCCEEEHHCCCCEEEEECHHHHHHHHHHCCCCCCC PVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQSDAQHVTIRAVPLPLRQQNLQI CCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEE LIPELIGYLAQQTTFATVNIAQWIARNVQSEHPQWSMAQAISLLADVERLCPQLVKAPPG EHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GLLQPVDLHSAMNALKHE CCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA