| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16767369
Identifier: 16767369
GI number: 16767369
Start: 4315517
End: 4316641
Strand: Reverse
Name: 16767369
Synonym: STM4103
Alternate gene names: NA
Gene position: 4316641-4315517 (Counterclockwise)
Preceding gene: 16767373
Following gene: 16767368
Centisome position: 88.87
GC content: 51.47
Gene sequence:
>1125_bases ATGCCGCCTCTGTTCACCATTAATGCCTGCAAAAGCGCTGGTTGTCGCAATCTTGGGCTGCCTGACTCGCCGGATTATGT GTGGCCGGACTATCGCCTGGGTTATCCGGCATTGCATTGTCGAGCCTGCGGCAGTTATCCGCCGCTCTTCAACGAGGGGG AATTTCGCCGCTGGGCGTCTGCTTATATCGCGCAATATGCCAAAGAGCATGGTCACTTTTGCCCCGACTGCTATCAAAAA ACATGGATTCGTTATGGACGTAATCCCGGCGGAACGCAGCGACTTCAGTGCCAGTACTGTAAGAAAGTCTGGACGCCAAA ACAGCACGCGCTGAATGTCGCCGAAACGCCGGAACAGATTTGCAGTATTCCGCTGCTCGTACCGTTTCAGGGAGCGAATG CCTTCCAGCAATTGTACTTTTTATTCAGTTTTGATGCTGTTCGCGGCAATATTCTTCACCTTTCCAGCAATTTCACGTTA CTGTCTGCCGGAAAAAGTTTGCATTACCACTGGAAAGGAATTGCGCCGCCCGAGGGCGAGAAGGGCGATATTATTCACCG TATCGCCATTAAAGAACGGCAATTTTTACAGCGAAGTCAGTTCGATGAGATTCAGTATGGCCCGGCGGCGCTTAAACGTA ACGCGCAAGGAACAATACTTCGCCCGGTCATTACGGCGCATGGTCATTTTCGGGTGCTGAAAAACCGCTTTCCTGATGTC GCGACACACATCATTGCCCATGAGTGTTTTTTGCGCGGCGCGGTCATTACGGCATGGGCGGAGCGGTTTCGCCAGCGTCT CTCCTCGCTGTGGTTCGTTGAGGAAGAGATAAACGATGACGATTGCCGCGCAGAGTGGCAACTGTTAGGCAAAACATGGC AGGGATGGTGGCAAAATCAGTGGCAACTCTGGGGGCAAGGTCACAACCGCAAAATGGTCTGTTCGTTAACCGGTTCCCAC TTAGAACAAGGTGTCGCCGTTAATCTGGCGGCCAGTCGCCGCTTTGTTACCTGGCTATGGCAACAACCTGAATTCCAGCA AAGCGCCCACTATTCCGCCAAACGCGTCACGCAAATTCTGTATTTTCTGACGGAAAAATATAATTCACAATGGAATCACA TTTAA
Upstream 100 bases:
>100_bases CGTTACGTTCTGAAAGGTTTTTTTATGTGAGAGTCCTCACACCCGCGTACCGTTTTATGAAGGCAGAATCAACGACCTGC CAAAATCGTTGGTAAAATGT
Downstream 100 bases:
>100_bases CCCAATGATGTAATGCCACGCATAAAAAATCACAGATTATCATTCAGAAGGCGCTATAGATTTAATCACCTCACATCCTG CTTTTATACGCTGAAAAAGA
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MPPLFTINACKSAGCRNLGLPDSPDYVWPDYRLGYPALHCRACGSYPPLFNEGEFRRWASAYIAQYAKEHGHFCPDCYQK TWIRYGRNPGGTQRLQCQYCKKVWTPKQHALNVAETPEQICSIPLLVPFQGANAFQQLYFLFSFDAVRGNILHLSSNFTL LSAGKSLHYHWKGIAPPEGEKGDIIHRIAIKERQFLQRSQFDEIQYGPAALKRNAQGTILRPVITAHGHFRVLKNRFPDV ATHIIAHECFLRGAVITAWAERFRQRLSSLWFVEEEINDDDCRAEWQLLGKTWQGWWQNQWQLWGQGHNRKMVCSLTGSH LEQGVAVNLAASRRFVTWLWQQPEFQQSAHYSAKRVTQILYFLTEKYNSQWNHI
Sequences:
>Translated_374_residues MPPLFTINACKSAGCRNLGLPDSPDYVWPDYRLGYPALHCRACGSYPPLFNEGEFRRWASAYIAQYAKEHGHFCPDCYQK TWIRYGRNPGGTQRLQCQYCKKVWTPKQHALNVAETPEQICSIPLLVPFQGANAFQQLYFLFSFDAVRGNILHLSSNFTL LSAGKSLHYHWKGIAPPEGEKGDIIHRIAIKERQFLQRSQFDEIQYGPAALKRNAQGTILRPVITAHGHFRVLKNRFPDV ATHIIAHECFLRGAVITAWAERFRQRLSSLWFVEEEINDDDCRAEWQLLGKTWQGWWQNQWQLWGQGHNRKMVCSLTGSH LEQGVAVNLAASRRFVTWLWQQPEFQQSAHYSAKRVTQILYFLTEKYNSQWNHI >Mature_373_residues PPLFTINACKSAGCRNLGLPDSPDYVWPDYRLGYPALHCRACGSYPPLFNEGEFRRWASAYIAQYAKEHGHFCPDCYQKT WIRYGRNPGGTQRLQCQYCKKVWTPKQHALNVAETPEQICSIPLLVPFQGANAFQQLYFLFSFDAVRGNILHLSSNFTLL SAGKSLHYHWKGIAPPEGEKGDIIHRIAIKERQFLQRSQFDEIQYGPAALKRNAQGTILRPVITAHGHFRVLKNRFPDVA THIIAHECFLRGAVITAWAERFRQRLSSLWFVEEEINDDDCRAEWQLLGKTWQGWWQNQWQLWGQGHNRKMVCSLTGSHL EQGVAVNLAASRRFVTWLWQQPEFQQSAHYSAKRVTQILYFLTEKYNSQWNHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43398; Mature: 43267
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLFTINACKSAGCRNLGLPDSPDYVWPDYRLGYPALHCRACGSYPPLFNEGEFRRWAS CCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHH AYIAQYAKEHGHFCPDCYQKTWIRYGRNPGGTQRLQCQYCKKVWTPKQHALNVAETPEQI HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCHHHH CSIPLLVPFQGANAFQQLYFLFSFDAVRGNILHLSSNFTLLSAGKSLHYHWKGIAPPEGE HCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCEEEEEECCCCCCCCC KGDIIHRIAIKERQFLQRSQFDEIQYGPAALKRNAQGTILRPVITAHGHFRVLKNRFPDV CCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEHHHHHCCCHHHHHHHCCHHH ATHIIAHECFLRGAVITAWAERFRQRLSSLWFVEEEINDDDCRAEWQLLGKTWQGWWQNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCHHHHHHHHHHHHHHHHHCCC WQLWGQGHNRKMVCSLTGSHLEQGVAVNLAASRRFVTWLWQQPEFQQSAHYSAKRVTQIL EEEECCCCCCEEEEEECHHHHHCCEEEEEECCCCEEHEEECCCCHHHHHHHHHHHHHHHH YFLTEKYNSQWNHI HHHHHHHCCCCCCC >Mature Secondary Structure PPLFTINACKSAGCRNLGLPDSPDYVWPDYRLGYPALHCRACGSYPPLFNEGEFRRWAS CCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHH AYIAQYAKEHGHFCPDCYQKTWIRYGRNPGGTQRLQCQYCKKVWTPKQHALNVAETPEQI HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCHHHH CSIPLLVPFQGANAFQQLYFLFSFDAVRGNILHLSSNFTLLSAGKSLHYHWKGIAPPEGE HCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCEEEEEECCCCCCCCC KGDIIHRIAIKERQFLQRSQFDEIQYGPAALKRNAQGTILRPVITAHGHFRVLKNRFPDV CCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEHHHHHCCCHHHHHHHCCHHH ATHIIAHECFLRGAVITAWAERFRQRLSSLWFVEEEINDDDCRAEWQLLGKTWQGWWQNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCHHHHHHHHHHHHHHHHHCCC WQLWGQGHNRKMVCSLTGSHLEQGVAVNLAASRRFVTWLWQQPEFQQSAHYSAKRVTQIL EEEECCCCCCEEEEEECHHHHHCCEEEEEECCCCEEHEEECCCCHHHHHHHHHHHHHHHH YFLTEKYNSQWNHI HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA