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The map label for this gene is yijF [H]

Identifier: 16767373

GI number: 16767373

Start: 4321821

End: 4322444

Strand: Reverse

Name: yijF [H]

Synonym: STM4107

Alternate gene names: 16767373

Gene position: 4322444-4321821 (Counterclockwise)

Preceding gene: 16767374

Following gene: 16767369

Centisome position: 88.99

GC content: 49.68

Gene sequence:

>624_bases
ATGAAATTCGCACAGGCGCTTATCGGTATTCTTGCTGCTTTTTTTATTAGCCATATCTCTCATCATTCGCCACGCTCTGA
TACCAGACCAATAACCGTTCAGGCGCAAACTAATGCTGCAATCGCCCAAAGTGCCGGGACGCAAATAGGTAAGACGCTAT
TTTATGATGCTGCCTATGTTCGTCTGGATTATCCGAATGGCGATCTTCCGCTGGAGCGTGGCGTATGTGCAGATGTCGTC
ATCCGCGCGCTGCGCAGTCAGCAGGTTGATTTACAGAAACGGGTACATGAAGACATGCAGGCGCATTTCTCTGCCTACCC
GAATAACTGGAAGCTGAAACGCCCGGACAGCAATATCGACCATCGCCGCGTTCCGAATCTGGAAACCTGGTTCCAGCGTC
AAAACAAAGCTTTGCCGGTGACAGATAAATATAGCGATTATCAACCGGGAGATATTGTCTCCTGGCGACTGGATAACGGC
CTTGCGCATATTGGCGTGGTATCCCTGAACGTCACGCCTGAAGGGGTGCCGCTGGTTGTGCATAACATAGGCGCGGGAGC
ACAGGAGGAAGATGTATTATTTAACTGGAAAGTCACGGGGCATTTTCGTTATTTTTCGCATTAA

Upstream 100 bases:

>100_bases
GGAATCAGTCCATTTTGTCCTGAAATAGACTTTTTTATCACGCACCATTCTCTCCGCGGAAAGTCAAATGACGTACTGAC
ACACTTCACGGACGAAGAAG

Downstream 100 bases:

>100_bases
ACGAGGAAAACGTCAGCGACTACCGAATAGCAGCCGCTGACGAATTAACCTGTCAGATTATTGCAGATCGAAACGGTCCA
GGTTCATCACTTTCACCCAT

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKFAQALIGILAAFFISHISHHSPRSDTRPITVQAQTNAAIAQSAGTQIGKTLFYDAAYVRLDYPNGDLPLERGVCADVV
IRALRSQQVDLQKRVHEDMQAHFSAYPNNWKLKRPDSNIDHRRVPNLETWFQRQNKALPVTDKYSDYQPGDIVSWRLDNG
LAHIGVVSLNVTPEGVPLVVHNIGAGAQEEDVLFNWKVTGHFRYFSH

Sequences:

>Translated_207_residues
MKFAQALIGILAAFFISHISHHSPRSDTRPITVQAQTNAAIAQSAGTQIGKTLFYDAAYVRLDYPNGDLPLERGVCADVV
IRALRSQQVDLQKRVHEDMQAHFSAYPNNWKLKRPDSNIDHRRVPNLETWFQRQNKALPVTDKYSDYQPGDIVSWRLDNG
LAHIGVVSLNVTPEGVPLVVHNIGAGAQEEDVLFNWKVTGHFRYFSH
>Mature_207_residues
MKFAQALIGILAAFFISHISHHSPRSDTRPITVQAQTNAAIAQSAGTQIGKTLFYDAAYVRLDYPNGDLPLERGVCADVV
IRALRSQQVDLQKRVHEDMQAHFSAYPNNWKLKRPDSNIDHRRVPNLETWFQRQNKALPVTDKYSDYQPGDIVSWRLDNG
LAHIGVVSLNVTPEGVPLVVHNIGAGAQEEDVLFNWKVTGHFRYFSH

Specific function: Unknown

COG id: COG3738

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790380, Length=191, Percent_Identity=69.1099476439791, Blast_Score=273, Evalue=6e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009706
- ProDom:   PD357862 [H]

Pfam domain/function: PF06940 DUF1287 [H]

EC number: NA

Molecular weight: Translated: 23341; Mature: 23341

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAQALIGILAAFFISHISHHSPRSDTRPITVQAQTNAAIAQSAGTQIGKTLFYDAAYV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHEECEEEE
RLDYPNGDLPLERGVCADVVIRALRSQQVDLQKRVHEDMQAHFSAYPNNWKLKRPDSNID
EEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC
HRRVPNLETWFQRQNKALPVTDKYSDYQPGDIVSWRLDNGLAHIGVVSLNVTPEGVPLVV
CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCEEEE
HNIGAGAQEEDVLFNWKVTGHFRYFSH
EECCCCCCCCCEEEEEEEEEEEEEECC
>Mature Secondary Structure
MKFAQALIGILAAFFISHISHHSPRSDTRPITVQAQTNAAIAQSAGTQIGKTLFYDAAYV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHEECEEEE
RLDYPNGDLPLERGVCADVVIRALRSQQVDLQKRVHEDMQAHFSAYPNNWKLKRPDSNID
EEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC
HRRVPNLETWFQRQNKALPVTDKYSDYQPGDIVSWRLDNGLAHIGVVSLNVTPEGVPLVV
CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCEEEE
HNIGAGAQEEDVLFNWKVTGHFRYFSH
EECCCCCCCCCEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]