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The map label for this gene is yneB

Identifier: 16767344

GI number: 16767344

Start: 4288151

End: 4289026

Strand: Direct

Name: yneB

Synonym: STM4078

Alternate gene names: 16767344

Gene position: 4288151-4289026 (Clockwise)

Preceding gene: 16767343

Following gene: 39546390

Centisome position: 88.28

GC content: 47.26

Gene sequence:

>876_bases
ATGGCTGATTTAGATGATATTAAAGATGGCAAAGATTTTCACACCGATAAACCACAAACTAACACTTTGTTCGCATTAAA
AGGCTGTGGCGCGCTGGATTGGGGAATGCAGTCCAGACTGGCGAGGATTTTTAATCCCAAGACCAGAAAAACGGTCATGC
TGGCCTTTGACCATGGATATTTCCAGGGGCCGACAACCGGACTTGAGCGTATTGATATCAATATTGCGCCGCTCTTTGAA
TATGCTGATGTCTTAATGTGTACTCGCGGCATATTACGCAGTGTGGTACCTCCGGCAATCAATAAACCAGTCGTTTTACG
CGCGTCCGGGGCGAATTCTATTCTCACTGAATTAAGCAATGAGGCGGTTGCGGTGGCGATGGATGACGCTGTGCGGTTGA
ATAGCTGTGCTGCTGCCGCACAGGTTTATATTGGTAGTGAGCATGAACATCAGTCGATTAAAAATATTATTCAACTGATT
GATGCCGGGTTACGCGTCGGGATGCCAATAATGGCAGTGACCGGGGTGGGTAAAGATATGGCTCGCGACCAGCGTTATTT
TTCACTGGCAACGCGTATCGCTGCGGAAATGGGGGCGCAAATTATCAAAACGTATTATGTCGATAAAGGTTTTGAGCGTA
TTGCGGCAGGTTGTCCGGTGCCGATTGTCATCGCCGGCGGTAAAAAACTGCCTGAACGTGAAGCATTGGAAATGTGCTAT
CAGGCGATTGACCAGGGGGCTTCTGGCGTAGATATGGGGCGTAATATATTCCAGTCAGAAGATCCGGTAGCCATGATTAA
AGCGGTACATGCTGTCGTTCATCATAACGAAACAGCAGAGCGTGCTTATGAGCTGTTTTTGAGTGAGAAAAGTTAA

Upstream 100 bases:

>100_bases
GGTAACGGCATTGTGTTATTGCCGGAGCGTGTCATTTTCAACAAAGACAATATCGACAAATATGATTTCTGATAACTGTT
ATGTATCGACGGAGTAAAGA

Downstream 100 bases:

>100_bases
ATGAGATCGCTTCCCCATCTTTTACCGATGCGAGGAGATGGGGATGACTGTTATTTTATTTGGAATAATCAGGGGGTTAA
TGATGCACGTTACGCTGGTT

Product: aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MADLDDIKDGKDFHTDKPQTNTLFALKGCGALDWGMQSRLARIFNPKTRKTVMLAFDHGYFQGPTTGLERIDINIAPLFE
YADVLMCTRGILRSVVPPAINKPVVLRASGANSILTELSNEAVAVAMDDAVRLNSCAAAAQVYIGSEHEHQSIKNIIQLI
DAGLRVGMPIMAVTGVGKDMARDQRYFSLATRIAAEMGAQIIKTYYVDKGFERIAAGCPVPIVIAGGKKLPEREALEMCY
QAIDQGASGVDMGRNIFQSEDPVAMIKAVHAVVHHNETAERAYELFLSEKS

Sequences:

>Translated_291_residues
MADLDDIKDGKDFHTDKPQTNTLFALKGCGALDWGMQSRLARIFNPKTRKTVMLAFDHGYFQGPTTGLERIDINIAPLFE
YADVLMCTRGILRSVVPPAINKPVVLRASGANSILTELSNEAVAVAMDDAVRLNSCAAAAQVYIGSEHEHQSIKNIIQLI
DAGLRVGMPIMAVTGVGKDMARDQRYFSLATRIAAEMGAQIIKTYYVDKGFERIAAGCPVPIVIAGGKKLPEREALEMCY
QAIDQGASGVDMGRNIFQSEDPVAMIKAVHAVVHHNETAERAYELFLSEKS
>Mature_290_residues
ADLDDIKDGKDFHTDKPQTNTLFALKGCGALDWGMQSRLARIFNPKTRKTVMLAFDHGYFQGPTTGLERIDINIAPLFEY
ADVLMCTRGILRSVVPPAINKPVVLRASGANSILTELSNEAVAVAMDDAVRLNSCAAAAQVYIGSEHEHQSIKNIIQLID
AGLRVGMPIMAVTGVGKDMARDQRYFSLATRIAAEMGAQIIKTYYVDKGFERIAAGCPVPIVIAGGKKLPEREALEMCYQ
AIDQGASGVDMGRNIFQSEDPVAMIKAVHAVVHHNETAERAYELFLSEKS

Specific function: Could be involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle

COG id: COG1830

COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family

Homologues:

Organism=Escherichia coli, GI1787796, Length=290, Percent_Identity=89.6551724137931, Blast_Score=548, Evalue=1e-157,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LSRF_SALCH (Q57HD9)

Other databases:

- EMBL:   AE017220
- RefSeq:   YP_218954.1
- ProteinModelPortal:   Q57HD9
- SMR:   Q57HD9
- PRIDE:   Q57HD9
- GeneID:   3336506
- GenomeReviews:   AE017220_GR
- KEGG:   sec:SC3967
- HOGENOM:   HBG553580
- OMA:   FQSEAPV
- ProtClustDB:   PRK08227
- BioCyc:   SENT321314:SCH_3967-MONOMER
- GO:   GO:0005737
- InterPro:   IPR013785
- InterPro:   IPR002915
- Gene3D:   G3DSA:3.20.20.70

Pfam domain/function: PF01791 DeoC

EC number: 4.2.1.- [C]

Molecular weight: Translated: 31743; Mature: 31612

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: ACT_SITE 203-203

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLDDIKDGKDFHTDKPQTNTLFALKGCGALDWGMQSRLARIFNPKTRKTVMLAFDHGY
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCC
FQGPTTGLERIDINIAPLFEYADVLMCTRGILRSVVPPAINKPVVLRASGANSILTELSN
CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCC
EAVAVAMDDAVRLNSCAAAAQVYIGSEHEHQSIKNIIQLIDAGLRVGMPIMAVTGVGKDM
CEEEEEECCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHH
ARDQRYFSLATRIAAEMGAQIIKTYYVDKGFERIAAGCPVPIVIAGGKKLPEREALEMCY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH
QAIDQGASGVDMGRNIFQSEDPVAMIKAVHAVVHHNETAERAYELFLSEKS
HHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADLDDIKDGKDFHTDKPQTNTLFALKGCGALDWGMQSRLARIFNPKTRKTVMLAFDHGY
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCC
FQGPTTGLERIDINIAPLFEYADVLMCTRGILRSVVPPAINKPVVLRASGANSILTELSN
CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCC
EAVAVAMDDAVRLNSCAAAAQVYIGSEHEHQSIKNIIQLIDAGLRVGMPIMAVTGVGKDM
CEEEEEECCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHH
ARDQRYFSLATRIAAEMGAQIIKTYYVDKGFERIAAGCPVPIVIAGGKKLPEREALEMCY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH
QAIDQGASGVDMGRNIFQSEDPVAMIKAVHAVVHHNETAERAYELFLSEKS
HHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA