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The map label for this gene is yigA

Identifier: 16767218

GI number: 16767218

Start: 4153083

End: 4153790

Strand: Direct

Name: yigA

Synonym: STM3948

Alternate gene names: 16767218

Gene position: 4153083-4153790 (Clockwise)

Preceding gene: 161353579

Following gene: 16767219

Centisome position: 85.5

GC content: 58.19

Gene sequence:

>708_bases
ATGAAGCAACCAGAGGAAGAACTACAGGAAACGCTCACGGAACTGGACGATCGAGCGGTCGTCGATTACCTGCGCCACCA
CCCTGAGTTTTTTATCCGTAACGCCCACGCCGTTGAAGCGATGCGTGTTCCACATCCCGTGCGGGGAACGGTTTCGCTCG
TTGAGTGGCATATGGCCCGCGCGCGTAATCACATCAATGTGCTTGAAGAAAATATGACGCTGCTGATGGAACAGGCTCAT
GCCAATGAAAGCCTGTTTTATCGCTTGCTGCATCTGCAAAGCCGTCTGGTCGCCGCGGATAGTCTGGATGAGATGCTGGT
GCGGTTTCACCGCTGGGCGCGCGATTTGGGGCTTGCCGGCGCGACGCTGCGTTTGTTCCCGGATCGGTGGCGTCTTGGCG
CGCCATCGCGCTATACACATCTGGCTTTAAACCGTCAGGCCTTTGAGCCGCTGCGTATTCAACGGCTGGGACAGTCGCAG
CATTATCTTGGCCCGCTAAACGGCCCGGAACTGCTGGTGGTCTTGCCGGAGGCGAAGGCTGTAGGCTCGGTAGCCATGTC
GATGATGGGCAGCGATGGCGGCCTCGGGGTGATTCTCTTCAGCAGCCGTGACCCGCATCACTATCAGCCGGGACAGGGGA
CGCAGCTTTTACAGGAGATCGCGCTGATGCTGCCGGAACTGCTGGAACGCTGGATTAAACGCGTATGA

Upstream 100 bases:

>100_bases
AATTACCGGGCGGTCGGCTGGATATCGCCTGGAAAGGTCCGGGTCATCCGTTATACATGACTGGTCCGGCGGCACATATC
TACGACGGATTTATCCATTT

Downstream 100 bases:

>100_bases
CGGATGTCGCGCTTTCTCAGGATGTCTCGCGGTTCCTGCGCTATTTAGGCGTGGAGCGCCAGCTTAGCCCCATTACCCTG
CTGAACTACCAGCGTCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKQPEEELQETLTELDDRAVVDYLRHHPEFFIRNAHAVEAMRVPHPVRGTVSLVEWHMARARNHINVLEENMTLLMEQAH
ANESLFYRLLHLQSRLVAADSLDEMLVRFHRWARDLGLAGATLRLFPDRWRLGAPSRYTHLALNRQAFEPLRIQRLGQSQ
HYLGPLNGPELLVVLPEAKAVGSVAMSMMGSDGGLGVILFSSRDPHHYQPGQGTQLLQEIALMLPELLERWIKRV

Sequences:

>Translated_235_residues
MKQPEEELQETLTELDDRAVVDYLRHHPEFFIRNAHAVEAMRVPHPVRGTVSLVEWHMARARNHINVLEENMTLLMEQAH
ANESLFYRLLHLQSRLVAADSLDEMLVRFHRWARDLGLAGATLRLFPDRWRLGAPSRYTHLALNRQAFEPLRIQRLGQSQ
HYLGPLNGPELLVVLPEAKAVGSVAMSMMGSDGGLGVILFSSRDPHHYQPGQGTQLLQEIALMLPELLERWIKRV
>Mature_235_residues
MKQPEEELQETLTELDDRAVVDYLRHHPEFFIRNAHAVEAMRVPHPVRGTVSLVEWHMARARNHINVLEENMTLLMEQAH
ANESLFYRLLHLQSRLVAADSLDEMLVRFHRWARDLGLAGATLRLFPDRWRLGAPSRYTHLALNRQAFEPLRIQRLGQSQ
HYLGPLNGPELLVVLPEAKAVGSVAMSMMGSDGGLGVILFSSRDPHHYQPGQGTQLLQEIALMLPELLERWIKRV

Specific function: Unknown

COG id: COG3159

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790243, Length=235, Percent_Identity=85.9574468085106, Blast_Score=408, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIGA_SALTY (P55886)

Other databases:

- EMBL:   AF233324
- EMBL:   AE006468
- EMBL:   U92525
- RefSeq:   NP_462833.1
- PRIDE:   P55886
- GeneID:   1255474
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM3948
- NMPDR:   fig|99287.1.peg.3807
- HOGENOM:   HBG416151
- OMA:   DNDRLFD
- ProtClustDB:   PRK10963
- BioCyc:   STYP99287:STM3948-MONOMER
- InterPro:   IPR007435

Pfam domain/function: PF04340 DUF484

EC number: NA

Molecular weight: Translated: 26951; Mature: 26951

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPEEELQETLTELDDRAVVDYLRHHPEFFIRNAHAVEAMRVPHPVRGTVSLVEWHMAR
CCCHHHHHHHHHHHHCHHHHHHHHHHCHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHH
ARNHINVLEENMTLLMEQAHANESLFYRLLHLQSRLVAADSLDEMLVRFHRWARDLGLAG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
ATLRLFPDRWRLGAPSRYTHLALNRQAFEPLRIQRLGQSQHYLGPLNGPELLVVLPEAKA
CEEEECCCHHCCCCCCCHHHHHHCHHHCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCHH
VGSVAMSMMGSDGGLGVILFSSRDPHHYQPGQGTQLLQEIALMLPELLERWIKRV
HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQPEEELQETLTELDDRAVVDYLRHHPEFFIRNAHAVEAMRVPHPVRGTVSLVEWHMAR
CCCHHHHHHHHHHHHCHHHHHHHHHHCHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHH
ARNHINVLEENMTLLMEQAHANESLFYRLLHLQSRLVAADSLDEMLVRFHRWARDLGLAG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
ATLRLFPDRWRLGAPSRYTHLALNRQAFEPLRIQRLGQSQHYLGPLNGPELLVVLPEAKA
CEEEECCCHHCCCCCCCHHHHHHCHHHCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCHH
VGSVAMSMMGSDGGLGVILFSSRDPHHYQPGQGTQLLQEIALMLPELLERWIKRV
HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609