| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is glgA [H]
Identifier: 16766821
GI number: 16766821
Start: 3701379
End: 3702812
Strand: Reverse
Name: glgA [H]
Synonym: STM3535
Alternate gene names: 16766821
Gene position: 3702812-3701379 (Counterclockwise)
Preceding gene: 16766822
Following gene: 16766820
Centisome position: 76.23
GC content: 57.11
Gene sequence:
>1434_bases ATGCAGGTTTTACATGTATGTTCAGAGATGTTCCCCCTGCTGAAGACTGGGGGGCTGGCGGATGTGATAGGCGCGTTGCC TGCGGCACAAATTGCGGATGGTGTTGATGTTCGCGTTCTGCTTCCAGGGTTTCCCGATATCCGTCGGGGGATACCCGACG CGCATGTGGTGAGCCGCCGCGATACTTTCGCAGGTAAGATATCGCTGCTGTTCGGGCATTATAACGGCGTGGGCATTTAT CTGATCGACGCGCCGCATCTGTACGAGCGTCCAGGCAGTCCCTATCACGATACGAATTTATATGCCTATACCGATAACGT GCTGCGCTTTGCCCTGTTAGGGTGGGTCGGCTGTGAAATGGCCTGCGGACTTGATCCATTCTGGCGCCCCGACGTGGTGC ACGCCCATGACTGGCACGCCGGGCTGGCGCCCGCCTATCTGGCGGCGCGCGGGCGGCCGGCGAAATCGGTCTTTACCGTA CACAACCTGGCCTATCAAGGCATGTTTTATGCAAAGCATATGGATGACATCGAACTGCCGTGGTCATTCTTTAATATGCA TGGGCTGGAGTTCAACGGACAACTCTCCTTTTTGAAGGCCGGTTTGTACTATGCCGACCATATAACGGCGGTGAGCCCGA CCTATGCGCGTGAAATTACTGAACCGCAGTTTGCTTATGGTATGGAAGGCCTGCTGCGTCAGCGTCATCTGGAAGGGCGC TTGTCCGGCATACTGAACGGCGTGGATGAGAAGATCTGGAACCCGGAATCCGATCTGCTGCTGGCGTCGCGCTACACGCG CGATACCCTGGAAGAGAAGGCGGAAAACAAACGTCAGCTACAAATTGCGATGGGGTTGAAGGTTAACGACAAAGTGCCGC TGTTCGCCGTGGTAAGCCGTCTGACCAACCAGAAAGGTCTGGATCTGGTGCTGGAGGCGTTACCGGGGCTGCTGGAGCAG GGCGGGCAGTTGGCGCTACTCGGCGCGGGCGATCCGGTGCTTCAGGAAGGGTTCCTCGCGGCGGCGGCGGAACACCCAGG GCAGGTTGGCGTACAGATCGGCTATCACGAAGCTTTCTCGCATCGCATTATGGGCGGCGCGGACGTTATTCTGGTGCCCA GTCGTTTCGAACCGTGCGGCTTAACGCAGTTATATGGCTTAAAGTATGGCACGCTGCCTCTGGTGCGGCGTACCGGGGGG TTGGCCGATACGGTCTCCGACAGTTCGCTGGAAAATCTGGCGGACGGTATCGCCAGCGGTTTTGTCTTTGAAGACAGTAA TGCCTGGTCGTTGCTACGCGCGATTCGGCGTGCTTTTGTGTTGTGGTCACGGCCTTCGCTTTGGCGGTTTGTACAACGGC AGGCGATGGCGATGGATTTTAGCTGGCAAGTTGCCGCGAAATCATACCGCGAGCTGTACTATCGCTTGAAATAG
Upstream 100 bases:
>100_bases ATGCGGAAGAGGACGCTCGTCGTTTCTACCGTTCAGAAGAAGGTATTGTACTGGTCACGCGTGAAATGCTGCGCAAACTG CAGGTCAAACAGGAGCGATA
Downstream 100 bases:
>100_bases TCATCCAGGAATCATTTATATGAATGCTCCGTTTACTTATGCATCGCCCACTCTCAGCGTTGAGGCGCTTAAGCATTCTA TTGCCTATAAGCTGATGTTT
Product: glycogen synthase
Products: NA
Alternate protein names: Starch [bacterial glycogen] synthase [H]
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDVRVLLPGFPDIRRGIPDAHVVSRRDTFAGKISLLFGHYNGVGIY LIDAPHLYERPGSPYHDTNLYAYTDNVLRFALLGWVGCEMACGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTV HNLAYQGMFYAKHMDDIELPWSFFNMHGLEFNGQLSFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLRQRHLEGR LSGILNGVDEKIWNPESDLLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQ GGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGG LADTVSDSSLENLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK
Sequences:
>Translated_477_residues MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDVRVLLPGFPDIRRGIPDAHVVSRRDTFAGKISLLFGHYNGVGIY LIDAPHLYERPGSPYHDTNLYAYTDNVLRFALLGWVGCEMACGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTV HNLAYQGMFYAKHMDDIELPWSFFNMHGLEFNGQLSFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLRQRHLEGR LSGILNGVDEKIWNPESDLLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQ GGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGG LADTVSDSSLENLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK >Mature_477_residues MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDVRVLLPGFPDIRRGIPDAHVVSRRDTFAGKISLLFGHYNGVGIY LIDAPHLYERPGSPYHDTNLYAYTDNVLRFALLGWVGCEMACGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTV HNLAYQGMFYAKHMDDIELPWSFFNMHGLEFNGQLSFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLRQRHLEGR LSGILNGVDEKIWNPESDLLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQ GGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGG LADTVSDSSLENLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK
Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]
COG id: COG0297
COG function: function code G; Glycogen synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789836, Length=477, Percent_Identity=94.3396226415094, Blast_Score=930, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011835 - InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.21 [H]
Molecular weight: Translated: 52946; Mature: 52946
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDVRVLLPGFPDIRRGIPDAHVVSRR CHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCCEEEEECCCCHHHHCCCCHHHCCCC DTFAGKISLLFGHYNGVGIYLIDAPHLYERPGSPYHDTNLYAYTDNVLRFALLGWVGCEM CCCCCEEEEEEEEECCEEEEEEECCHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH ACGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAKHMDDIELP HCCCCCCCCCCCEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCEEEECCCCCCCCC WSFFNMHGLEFNGQLSFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLRQRHLEGR HHHHHCCCEEECCCCHHHHHHHHHHHCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHH LSGILNGVDEKIWNPESDLLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSR HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCEEEEEEECEEECCCCHHHHHHHH LTNQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFS HCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECHHHHHH HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASG HHHCCCCCEEEECCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC FVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK CEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDVRVLLPGFPDIRRGIPDAHVVSRR CHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCCEEEEECCCCHHHHCCCCHHHCCCC DTFAGKISLLFGHYNGVGIYLIDAPHLYERPGSPYHDTNLYAYTDNVLRFALLGWVGCEM CCCCCEEEEEEEEECCEEEEEEECCHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH ACGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAKHMDDIELP HCCCCCCCCCCCEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCEEEECCCCCCCCC WSFFNMHGLEFNGQLSFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLRQRHLEGR HHHHHCCCEEECCCCHHHHHHHHHHHCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHH LSGILNGVDEKIWNPESDLLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSR HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCEEEEEEECEEECCCCHHHHHHHH LTNQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFS HCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECHHHHHH HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASG HHHCCCCCEEEECCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC FVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK CEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA