| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is glgP [H]
Identifier: 16766820
GI number: 16766820
Start: 3698912
End: 3701359
Strand: Reverse
Name: glgP [H]
Synonym: STM3534
Alternate gene names: 16766820
Gene position: 3701359-3698912 (Counterclockwise)
Preceding gene: 16766821
Following gene: 16766819
Centisome position: 76.2
GC content: 52.25
Gene sequence:
>2448_bases ATGAATGCTCCGTTTACTTATGCATCGCCCACTCTCAGCGTTGAGGCGCTTAAGCATTCTATTGCCTATAAGCTGATGTT TACGATTGGTAAAGACCCGGTCATTGCCAATAAACACGAATGGCTGAACGCCACGTTGTTCGCGGTGCGCGATCGTCTGG TGGAGCGCTGGCTGCGTTCTAATCGAGCCCAATTATCGCAGGAAACCCGGCAGGTTTATTACCTGTCGATGGAGTTTTTG ATTGGTCGTACTCTCTCTAACGCGCTGCTCTCGTTGGGCATTTATGACGACGTTAAAGGCGCGCTGGAGGCCATGGGCTT AGATCTCGAAGAGCTGATCGATGAAGAGAATGACCCAGGGCTTGGCAACGGCGGCTTAGGACGGCTGGCGGCTTGCTTCC TGGACTCGCTGGCGACGCTAGGATTACCGGGCCGCGGGTACGGCATTCGCTACGATTACGGCATGTTTAAGCAGAATATT GTCGACGGGCGGCAAAAAGAGTCTCCGGATTACTGGCTGGAATATGGCAACCCGTGGGAGTTCAAGCGCCACAATACGCG CTATAAGGTGCTTTTTGGCGGGCGCATTCAGCAGGAAGGTAAAAAAGCGCGCTGGATTGAGACGGAAGAGATTCTGGCCG TCGCGTATGATCAGATCATCCCCGGTTACGACACCGACGCCACTAACACACTGCGGCTGTGGAATGCGCAGGCCAGTAGT GAAATCAACCTCGGTAAATTCAACCAGGGCGACTACTTTGCGGCGGTGGAAGATAAAAACCACTCTGAGAACGTTTCACG GGTGCTCTATCCGGACGATTCCACCTATTCCGGACGAGAGCTACGCCTGCGCCAGGAGTATTTTCTGGTCTCGGCGACGG TACAGGATATCCTGCACCGTCATTATCAACTGCATAAAACCTATGAGAATCTGGCGGATAAAATCGCCATTCACCTCAAT GATACGCATCCGGTGCTGTCAATTCCTGAGCTGATGCGCCTGCTGATTGATGAACATAAATTTAGCTGGGACGACGCGTT TGAGGTGTGCTGTCAGGTCTTCTCTTATACCAACCATACGTTGATGAGCGAGGCGCTGGAGACCTGGCCTGTCGATATGC TGGGGAAAATTCTGCCCCGTCACCTGCAGATTATCTTCGAGATTAACGACTATTTCCTGAAAACGGTGCAGGAGCAATAT CCCAACGATACCAGCCTGCTTGGACGCGCGTCGATTATTGATGAGTCGAACGGTCGCCGGGTACGGATGGCCTGGCTGGC GGTGGTGGTCAGCCATAAAGTCAACGGCGTTTCTGAACTCCATTCCAACCTGATGGTGCAGTCGCTGTTCGCGGATTTTG CGAAGATTTTCCCGACCCGTTTTTGTAACGTCACTAACGGCGTTACGCCGCGCCGCTGGCTGGCGCTGGCAAACCCGCCG CTTTCTGACGTGCTGGATGAGAATATTGGTCGTACCTGGCGTACCGATCTTAGCCAGCTCAGCGAGCTGAAGCAGCATTG TGATTATCCGCTGGTCAATCATGCGGTGCGTCAGGCGAAGCTGGAAAATAAAAAACGGCTGGCGGTAGTGATAGCGCAAC AACTGAATGTGGTGGTGAACCCTAAAGCGTTATTCGACGTGCAGATTAAGCGTATTCACGAATACAAGCGGCAGTTGATG AATGTACTGCATGTCATTACCCGCTATAACCGCATTAAAGAAAATCCGGAGGCCGACTGGGTGCCGCGGGTGAATATTTT TGCCGGTAAGGCGGCTTCCGCCTATTACATGGCAAAACACATTATTCATCTGATCAACGACGTGGCGAAAGTGATTAACA ACGATCCGCAGATTGGCGACAAGCTGAAAGTAGTGTTTATCCCGAACTACAGCGTCAGCCTGGCGCAGGTGATCATTCCC GCTGCCGACCTGTCTGAGCAGATTTCGCTGGCAGGGACAGAAGCTTCCGGCACCAGTAATATGAAATTTGCCCTGAACGG CGCGCTCACCATTGGTACGCTGGATGGCGCGAACGTAGAGATGCAGGAGCATATCGGCGAGGAGAATATCTTTATCTTCG GTAATACTGCCGAAGAGGTGGAAGCGTTGCGCAGGCAGGGTTATAAGCCTCGCGACTATTATGAAAAAGATGAAGAGCTA CATCAGGTACTGACGCAGATTGGTAGCGGCGTCTTTAATCCGGAAGAGCCAGGCCGTTACCGCGATCTGGTAGATTCGCT GATTAACTTTGGCGATCACTATCAGGTGCTGGCGGACTACCGCAGCTACGTGGACTGCCAGGATAAGGTGGATGAGTTGT ATCGTCGCCCGGAAGAATGGACGACGAAAGCGATGCTCAACATTGCCAATATGGGCTACTTCTCATCGGACAGAACCATC AAAGAGTATGCCGAAAATATCTGGCATATTGATCCGGTGCGGTTGTAG
Upstream 100 bases:
>100_bases CAACGGCAGGCGATGGCGATGGATTTTAGCTGGCAAGTTGCCGCGAAATCATACCGCGAGCTGTACTATCGCTTGAAATA GTCATCCAGGAATCATTTAT
Downstream 100 bases:
>100_bases CGGTTTAACGCTTGAGAACGGGGCCAAACGGCCCCGTTTTTTATCGTGGTATATTCGGGGGGTATGCCGATATTCGTCTG CTGAATCTGTTAGCGGCACT
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 815; Mature: 815
Protein sequence:
>815_residues MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFL IGRTLSNALLSLGIYDDVKGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI VDGRQKESPDYWLEYGNPWEFKRHNTRYKVLFGGRIQQEGKKARWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILHRHYQLHKTYENLADKIAIHLN DTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTVQEQY PNDTSLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPTRFCNVTNGVTPRRWLALANPP LSDVLDENIGRTWRTDLSQLSELKQHCDYPLVNHAVRQAKLENKKRLAVVIAQQLNVVVNPKALFDVQIKRIHEYKRQLM NVLHVITRYNRIKENPEADWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQVIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMQEHIGEENIFIFGNTAEEVEALRRQGYKPRDYYEKDEEL HQVLTQIGSGVFNPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRRPEEWTTKAMLNIANMGYFSSDRTI KEYAENIWHIDPVRL
Sequences:
>Translated_815_residues MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFL IGRTLSNALLSLGIYDDVKGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI VDGRQKESPDYWLEYGNPWEFKRHNTRYKVLFGGRIQQEGKKARWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILHRHYQLHKTYENLADKIAIHLN DTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTVQEQY PNDTSLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPTRFCNVTNGVTPRRWLALANPP LSDVLDENIGRTWRTDLSQLSELKQHCDYPLVNHAVRQAKLENKKRLAVVIAQQLNVVVNPKALFDVQIKRIHEYKRQLM NVLHVITRYNRIKENPEADWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQVIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMQEHIGEENIFIFGNTAEEVEALRRQGYKPRDYYEKDEEL HQVLTQIGSGVFNPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRRPEEWTTKAMLNIANMGYFSSDRTI KEYAENIWHIDPVRL >Mature_815_residues MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFL IGRTLSNALLSLGIYDDVKGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI VDGRQKESPDYWLEYGNPWEFKRHNTRYKVLFGGRIQQEGKKARWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILHRHYQLHKTYENLADKIAIHLN DTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTVQEQY PNDTSLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPTRFCNVTNGVTPRRWLALANPP LSDVLDENIGRTWRTDLSQLSELKQHCDYPLVNHAVRQAKLENKKRLAVVIAQQLNVVVNPKALFDVQIKRIHEYKRQLM NVLHVITRYNRIKENPEADWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQVIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMQEHIGEENIFIFGNTAEEVEALRRQGYKPRDYYEKDEEL HQVLTQIGSGVFNPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRRPEEWTTKAMLNIANMGYFSSDRTI KEYAENIWHIDPVRL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=812, Percent_Identity=50.7389162561576, Blast_Score=808, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=810, Percent_Identity=50.9876543209877, Blast_Score=807, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=810, Percent_Identity=49.5061728395062, Blast_Score=799, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=812, Percent_Identity=49.384236453202, Blast_Score=763, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=665, Percent_Identity=49.7744360902256, Blast_Score=694, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=815, Percent_Identity=93.0061349693251, Blast_Score=1565, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=766, Percent_Identity=48.1723237597911, Blast_Score=734, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=810, Percent_Identity=51.2345679012346, Blast_Score=840, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=810, Percent_Identity=51.2345679012346, Blast_Score=840, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=811, Percent_Identity=47.4722564734895, Blast_Score=726, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=809, Percent_Identity=49.6909765142151, Blast_Score=816, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=809, Percent_Identity=49.6909765142151, Blast_Score=816, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93344; Mature: 93344
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRS CCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHH NRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVKGALEAMGLDLEELIDEENDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCC LGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVDGRQKESPDYWLEYGNPWE CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHCCCCCCCCCCEEECCCCCC FKRHNTRYKVLFGGRIQQEGKKARWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS CCCCCCEEEEEECCEEHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILHR CCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH HYQLHKTYENLADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHT HHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH LMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTVQEQYPNDTSLLGRASIIDESNGRR HHHHHHHHCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCHHHHCCHHEEECCCCCE VRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPTRFCNVTNGVTPRRWLALANPP EHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCC LSDVLDENIGRTWRTDLSQLSELKQHCDYPLVNHAVRQAKLENKKRLAVVIAQQLNVVVN HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEC PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKENPEADWVPRVNIFAGKAASAYYMAKH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHH IIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQVIIPAADLSEQISLAGTEASGTSN HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCHHCCHHHHHCCCCCCCCCCC MKFALNGALTIGTLDGANVEMQEHIGEENIFIFGNTAEEVEALRRQGYKPRDYYEKDEEL EEEEEECEEEEEECCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCHHCCCHHHH HQVLTQIGSGVFNPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRRPEEW HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHH TTKAMLNIANMGYFSSDRTIKEYAENIWHIDPVRL HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRS CCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHH NRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVKGALEAMGLDLEELIDEENDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCC LGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVDGRQKESPDYWLEYGNPWE CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHCCCCCCCCCCEEECCCCCC FKRHNTRYKVLFGGRIQQEGKKARWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS CCCCCCEEEEEECCEEHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILHR CCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH HYQLHKTYENLADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHT HHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH LMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTVQEQYPNDTSLLGRASIIDESNGRR HHHHHHHHCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCHHHHCCHHEEECCCCCE VRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPTRFCNVTNGVTPRRWLALANPP EHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCC LSDVLDENIGRTWRTDLSQLSELKQHCDYPLVNHAVRQAKLENKKRLAVVIAQQLNVVVN HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEC PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKENPEADWVPRVNIFAGKAASAYYMAKH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHH IIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQVIIPAADLSEQISLAGTEASGTSN HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCHHCCHHHHHCCCCCCCCCCC MKFALNGALTIGTLDGANVEMQEHIGEENIFIFGNTAEEVEALRRQGYKPRDYYEKDEEL EEEEEECEEEEEECCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCHHCCCHHHH HQVLTQIGSGVFNPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRRPEEW HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHH TTKAMLNIANMGYFSSDRTIKEYAENIWHIDPVRL HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]