Click here to switch to the map view.

The map label for this gene is malT [H]

Identifier: 16766803

GI number: 16766803

Start: 3676900

End: 3679605

Strand: Direct

Name: malT [H]

Synonym: STM3515

Alternate gene names: 16766803

Gene position: 3676900-3679605 (Clockwise)

Preceding gene: 16766800

Following gene: 16766809

Centisome position: 75.7

GC content: 55.47

Gene sequence:

>2706_bases
ATGTTGATTCCGTCTAAATTAAGTCGTCCGGTTCGTCTCGACCATACCGTGGTTCGTGAGCGGCTGTTGGCTAAACTTTC
CGGCGCGAACAATTTCAGGCTCGCCCTGGTAACCAGTCCTGCTGGCTATGGGAAAACCACGCTTGTCTCACAGTGGGCGG
CGGGCAAAAATGAATTAGGCTGGTACTCTCTCGACGAAGGCGATAACCAGCAAGAGCGATTCGCCAGTTACTTAATTGCC
GCTATCCAACAGGCCACTGGCGGACACTGCTCGACCAGCGAAGCGATGGCGCAAAAACGTCAGTACGCCAGCCTGACGTC
TCTCTTCGCACAGCTCTTTATTGAACTGGCGCAGTGGCATCGCCCGCTTTATCTGGTGATTGACGACTACCATTTGATTA
CCAATCCGGTGATTCACGACGCGATGCGCTTTTTCTTACGGCATCAGCCGGAAAATTTCACCCTGGTGGTATTATCGCGT
AATTTGCCGCAACTGGGCATCGCTAACCTGCGCGTGCGCGATCAGCTGTTGGAAATCGGCAGCCAGCAGTTGGCTTTTAA
CCATCAGGAAGCAAAGCAATTTTTTGACCGTCGTCTTTCGTCGCCCATTGAAGCCGCTGAGAGCAGCCGCATGTGCGACG
ATGTGGCAGGTTGGGCCACTGCGCTACAGTTGATCGCCCTCTCCGCGCGCCAGAACCATACCTCTGCGCATCACTCCGCC
CGCCGTCTTGCCGGGATTAATGCCAGCCACCTTTCTGATTATCTGGTGGACGAAGTACTGGATAACGTGGATGTCAGCAC
CCGACATTTTTTACTTAAAAGCGCGATCTTACGCTCAATGAATGACGCGTTGATTGTGCGCGTGACCGGCGAAGAAAACG
GCCAGATGCGGCTGGAGGAGATTGAGCGCCAGGGGTTATTCCTGCAACGCATGGACGACACGGGCGAATGGTTCAGCTAT
CACCCGTTGTTTGGTAGCTTTCTGCGCCAGCGTTGCCAGTGGGAACTGGCGGCGGAACTGCCGGAGATCCACCGTGCGGC
CGCGGAAAGCTGGATGGAACAAGGTTTTCCCAGCGAAGCTATACATCATGCGCTGGCGGCGGGTGACGCGCAAATGCTGC
GCGATATCCTGCTTAACCATGCGTGGGGGCTGTTTAATCACAGTGAACTGGCGCTGCTGGAAGAGTCATTAAAAGCGCTG
CCGTGGGAAAGCCTGCTGGAAAATCCGCGGCTGGTGTTGTTACAGGCCTGGCTGATGCAAAGCCAACACCGCTACAGCGA
AGTGAATACGCTGCTGGCGCGCGCCGAGCAAGAGATCAAAGGGGTCATGGACGGCACACTGCATGCTGAATTTAACGCGC
TGCGCGCCCAGGTCGCCATCAACGACGGCAATCCGGAAGAGGCTGAGCGGCTGGCGAAACTGGCGCTGGATGAGCTTCCT
CTCGCCTGGTTTTATAGCCGTATTGTCGCGACCTCCGTTCACGGTGAAGTGCTGCACTGTAAAGGCGATCTCAGCCAGTC
TTTATCGCTGATGCAGCAAACCGAACAAATGGCGCGTCATCATGACGTCTGGCATTACGCGCTGTGGAGCTTAATTCAAC
AAAGCGAAATTCAGTTCGCCCAGGGATTCCTGCAGGCCGCATGGGAAACGCAGGAGAGAGCCTTCCAGTTGATCAAAGAG
CAACATCTGGAACAACTGCCGATGCATGAGTTTCTGGTACGTATCCGCGCGCAATTGCTGTGGGCGTGGGCGCGCCTTGA
CGAAGCGGAGGCCTCGGCGCGCAGCGGTATCGCTGTGCTGTCCACCTTCCAGCCGCAACAACAGTTGCAGTGCCTGACGT
TACTGGTGCAGTGCTCGCTGGCGCGCGGCGATCTGGATAATGCCCGTAGTCAGCTTAACCGACTGGAAAATTTATTAGGC
AATGGCCGTTATCACTGCGACTGGATCTCTAACGCCGATAAGGTGCGTGTCATTTACTGGCAGTTAACCGGCGACAAAAA
ATCCGCCGCCAACTGGTTACGTCATACGCCCAAACCGGCGTTTGCCAATAACCATTTTCTGCAAGGGCAATGGCGGAATA
TCGCCCGCGCGCAGATCCTGCTGGGCGAATTCGAGCCTGCGGAAATCGTGCTGGAAGAGTTAAATGAGAATGCCCGTAGC
CTGCGCTTAATGAGCGATTTAAACTGCAATCTGCTGTTACTCAATCAGCTTTACTGGCAATCCGGGCGGAAAAACGACGC
CCAGCGCGTATTGCTTGATGCCTTACAGCTCGCCAACCGCACCGGATTTATCAGCCATTTTGTGATTGAAGGCGAAGCCA
TGGCGCAACAATTGCGTCAGCTTATCCAGCTCAATACGCTGCCGGAGATGGAGCAGCATCGCGCGCAGCGCATCCTGCGA
GAGATTAACCAACATCACCGACATAAATTCGCCCATTTTGACGAAGGCTTCGTCGAGCGCCTGCTTAACCATCCGGATGT
CCCGGAGCTTATTCGCACCAGCCCGCTCACCCAGCGTGAATGGCAGGTGTTAGGGCTTATCTATTCCGGTTACAGCAACG
AACAGATTGCCGGCGAACTGGCGGTGGCCGCGACCACCATTAAGACGCATATCCGCAACCTCTACCAGAAACTCGGCGTC
GCGCACCGTCAGGACGCGGTACAGCACGCGCAGCAGTTGCTGAAGATGATGGGGTACGGGGTTTGA

Upstream 100 bases:

>100_bases
AGCTTGCATTAAAATGCTTTCTGGCCGACCTTATATCTATTAATTACGAAGCGCAAAAAAAATCGCAGTTCCCCCCATTT
CCCACAGTGAAGTGATTGCT

Downstream 100 bases:

>100_bases
GGCAAAACAGGCAACGTCCTGGTGTGTAAATTTGTTTAATCATAAAACCTGAAAGCACCGGTTAACATATGGGCAAAAAC
GGCGCTTTTAAAATAAATCG

Product: transcriptional regulator MalT

Products: NA

Alternate protein names: ATP-dependent transcriptional activator malT [H]

Number of amino acids: Translated: 901; Mature: 901

Protein sequence:

>901_residues
MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALVTSPAGYGKTTLVSQWAAGKNELGWYSLDEGDNQQERFASYLIA
AIQQATGGHCSTSEAMAQKRQYASLTSLFAQLFIELAQWHRPLYLVIDDYHLITNPVIHDAMRFFLRHQPENFTLVVLSR
NLPQLGIANLRVRDQLLEIGSQQLAFNHQEAKQFFDRRLSSPIEAAESSRMCDDVAGWATALQLIALSARQNHTSAHHSA
RRLAGINASHLSDYLVDEVLDNVDVSTRHFLLKSAILRSMNDALIVRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFSY
HPLFGSFLRQRCQWELAAELPEIHRAAAESWMEQGFPSEAIHHALAAGDAQMLRDILLNHAWGLFNHSELALLEESLKAL
PWESLLENPRLVLLQAWLMQSQHRYSEVNTLLARAEQEIKGVMDGTLHAEFNALRAQVAINDGNPEEAERLAKLALDELP
LAWFYSRIVATSVHGEVLHCKGDLSQSLSLMQQTEQMARHHDVWHYALWSLIQQSEIQFAQGFLQAAWETQERAFQLIKE
QHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIAVLSTFQPQQQLQCLTLLVQCSLARGDLDNARSQLNRLENLLG
NGRYHCDWISNADKVRVIYWQLTGDKKSAANWLRHTPKPAFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARS
LRLMSDLNCNLLLLNQLYWQSGRKNDAQRVLLDALQLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPEMEQHRAQRILR
EINQHHRHKFAHFDEGFVERLLNHPDVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELAVAATTIKTHIRNLYQKLGV
AHRQDAVQHAQQLLKMMGYGV

Sequences:

>Translated_901_residues
MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALVTSPAGYGKTTLVSQWAAGKNELGWYSLDEGDNQQERFASYLIA
AIQQATGGHCSTSEAMAQKRQYASLTSLFAQLFIELAQWHRPLYLVIDDYHLITNPVIHDAMRFFLRHQPENFTLVVLSR
NLPQLGIANLRVRDQLLEIGSQQLAFNHQEAKQFFDRRLSSPIEAAESSRMCDDVAGWATALQLIALSARQNHTSAHHSA
RRLAGINASHLSDYLVDEVLDNVDVSTRHFLLKSAILRSMNDALIVRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFSY
HPLFGSFLRQRCQWELAAELPEIHRAAAESWMEQGFPSEAIHHALAAGDAQMLRDILLNHAWGLFNHSELALLEESLKAL
PWESLLENPRLVLLQAWLMQSQHRYSEVNTLLARAEQEIKGVMDGTLHAEFNALRAQVAINDGNPEEAERLAKLALDELP
LAWFYSRIVATSVHGEVLHCKGDLSQSLSLMQQTEQMARHHDVWHYALWSLIQQSEIQFAQGFLQAAWETQERAFQLIKE
QHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIAVLSTFQPQQQLQCLTLLVQCSLARGDLDNARSQLNRLENLLG
NGRYHCDWISNADKVRVIYWQLTGDKKSAANWLRHTPKPAFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARS
LRLMSDLNCNLLLLNQLYWQSGRKNDAQRVLLDALQLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPEMEQHRAQRILR
EINQHHRHKFAHFDEGFVERLLNHPDVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELAVAATTIKTHIRNLYQKLGV
AHRQDAVQHAQQLLKMMGYGV
>Mature_901_residues
MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALVTSPAGYGKTTLVSQWAAGKNELGWYSLDEGDNQQERFASYLIA
AIQQATGGHCSTSEAMAQKRQYASLTSLFAQLFIELAQWHRPLYLVIDDYHLITNPVIHDAMRFFLRHQPENFTLVVLSR
NLPQLGIANLRVRDQLLEIGSQQLAFNHQEAKQFFDRRLSSPIEAAESSRMCDDVAGWATALQLIALSARQNHTSAHHSA
RRLAGINASHLSDYLVDEVLDNVDVSTRHFLLKSAILRSMNDALIVRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFSY
HPLFGSFLRQRCQWELAAELPEIHRAAAESWMEQGFPSEAIHHALAAGDAQMLRDILLNHAWGLFNHSELALLEESLKAL
PWESLLENPRLVLLQAWLMQSQHRYSEVNTLLARAEQEIKGVMDGTLHAEFNALRAQVAINDGNPEEAERLAKLALDELP
LAWFYSRIVATSVHGEVLHCKGDLSQSLSLMQQTEQMARHHDVWHYALWSLIQQSEIQFAQGFLQAAWETQERAFQLIKE
QHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIAVLSTFQPQQQLQCLTLLVQCSLARGDLDNARSQLNRLENLLG
NGRYHCDWISNADKVRVIYWQLTGDKKSAANWLRHTPKPAFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARS
LRLMSDLNCNLLLLNQLYWQSGRKNDAQRVLLDALQLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPEMEQHRAQRILR
EINQHHRHKFAHFDEGFVERLLNHPDVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELAVAATTIKTHIRNLYQKLGV
AHRQDAVQHAQQLLKMMGYGV

Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]

COG id: COG2909

COG function: function code K; ATP-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI2367223, Length=901, Percent_Identity=91.3429522752497, Blast_Score=1655, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 102965; Mature: 102965

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALVTSPAGYGKTTLVSQWAAGKNELG
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCC
WYSLDEGDNQQERFASYLIAAIQQATGGHCSTSEAMAQKRQYASLTSLFAQLFIELAQWH
CEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RPLYLVIDDYHLITNPVIHDAMRFFLRHQPENFTLVVLSRNLPQLGIANLRVRDQLLEIG
CCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCC
SQQLAFNHQEAKQFFDRRLSSPIEAAESSRMCDDVAGWATALQLIALSARQNHTSAHHSA
CHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RRLAGINASHLSDYLVDEVLDNVDVSTRHFLLKSAILRSMNDALIVRVTGEENGQMRLEE
HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHH
IERQGLFLQRMDDTGEWFSYHPLFGSFLRQRCQWELAAELPEIHRAAAESWMEQGFPSEA
HHHCCCEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IHHALAAGDAQMLRDILLNHAWGLFNHSELALLEESLKALPWESLLENPRLVLLQAWLMQ
HHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH
SQHRYSEVNTLLARAEQEIKGVMDGTLHAEFNALRAQVAINDGNPEEAERLAKLALDELP
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCC
LAWFYSRIVATSVHGEVLHCKGDLSQSLSLMQQTEQMARHHDVWHYALWSLIQQSEIQFA
HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGFLQAAWETQERAFQLIKEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIAVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHE
STFQPQQQLQCLTLLVQCSLARGDLDNARSQLNRLENLLGNGRYHCDWISNADKVRVIYW
ECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEE
QLTGDKKSAANWLRHTPKPAFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARS
EECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHH
LRLMSDLNCNLLLLNQLYWQSGRKNDAQRVLLDALQLANRTGFISHFVIEGEAMAQQLRQ
HHHHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHEECCHHHHHHHHH
LIQLNTLPEMEQHRAQRILREINQHHRHKFAHFDEGFVERLLNHPDVPELIRTSPLTQRE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHCCCCCHHH
WQVLGLIYSGYSNEQIAGELAVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
V
C
>Mature Secondary Structure
MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALVTSPAGYGKTTLVSQWAAGKNELG
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCC
WYSLDEGDNQQERFASYLIAAIQQATGGHCSTSEAMAQKRQYASLTSLFAQLFIELAQWH
CEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RPLYLVIDDYHLITNPVIHDAMRFFLRHQPENFTLVVLSRNLPQLGIANLRVRDQLLEIG
CCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCC
SQQLAFNHQEAKQFFDRRLSSPIEAAESSRMCDDVAGWATALQLIALSARQNHTSAHHSA
CHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RRLAGINASHLSDYLVDEVLDNVDVSTRHFLLKSAILRSMNDALIVRVTGEENGQMRLEE
HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHH
IERQGLFLQRMDDTGEWFSYHPLFGSFLRQRCQWELAAELPEIHRAAAESWMEQGFPSEA
HHHCCCEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IHHALAAGDAQMLRDILLNHAWGLFNHSELALLEESLKALPWESLLENPRLVLLQAWLMQ
HHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH
SQHRYSEVNTLLARAEQEIKGVMDGTLHAEFNALRAQVAINDGNPEEAERLAKLALDELP
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCC
LAWFYSRIVATSVHGEVLHCKGDLSQSLSLMQQTEQMARHHDVWHYALWSLIQQSEIQFA
HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGFLQAAWETQERAFQLIKEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIAVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHE
STFQPQQQLQCLTLLVQCSLARGDLDNARSQLNRLENLLGNGRYHCDWISNADKVRVIYW
ECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEE
QLTGDKKSAANWLRHTPKPAFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARS
EECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHH
LRLMSDLNCNLLLLNQLYWQSGRKNDAQRVLLDALQLANRTGFISHFVIEGEAMAQQLRQ
HHHHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHEECCHHHHHHHHH
LIQLNTLPEMEQHRAQRILREINQHHRHKFAHFDEGFVERLLNHPDVPELIRTSPLTQRE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHCCCCCHHH
WQVLGLIYSGYSNEQIAGELAVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA