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The map label for this gene is yhaO [H]

Identifier: 16766538

GI number: 16766538

Start: 3403351

End: 3404682

Strand: Reverse

Name: yhaO [H]

Synonym: STM3239

Alternate gene names: 16766538

Gene position: 3404682-3403351 (Counterclockwise)

Preceding gene: 16766539

Following gene: 16766537

Centisome position: 70.09

GC content: 50.23

Gene sequence:

>1332_bases
ATGGAATCGGCAAGTAATACCAGCGTAATCCTCGACGCATCAGCCCCGGCGCGTCGGGCAGGGATGACTGAAAGCGAATG
GCGTGAAGCCATCAAATTTGATAGTACCGACACCGGTTGGGTCATTATGAGTATCGGGATGGCGATTGGCGCAGGGATCG
TTTTTCTTCCTGTCCAGGTTGGCCTGATGGGACTTTGGGTCTTTTTACTCTCTTCTATTATTGGCTATCCGGCCATGTAC
CTGTTCCAGCGGCTGTTTATTAATACGCTGGCGGAATCCCCGGAATGTAAAGACTACCCCAGCGTGATCAGCGGCTATCT
GGGCAAAAACTGGGGTATTTTATTAGGCGCGCTGTACTTTGTGATGCTCGTCATCTGGATGTTCGTCTATTCTACGGCGA
TTACTAACGACAGCGCCTCTTATCTGCATACTTTCGGCGTAACGGAAGGATTGCTTTCCGATAGTCCATTTTATGGTCTG
GTGCTGATCTGCATCCTGGTGGCGATTTCCTCACGCGGTGAAAAATTACTGTTCAAAATCTCCACTGGCATGGTGCTGAC
CAAGCTACTGGTAGTGGCGGCGCTGGGCGTCTCTATGGTGGGTATGTGGCATCTGTATAACATTGGCGCGCTGCCGCCGA
TGGCCCTGCTGATTAAAAACGCCATTATTACCCTGCCATTTACGCTGACCTCGATTTTATTTATCCAGACGTTAAGCCCA
ATGGTGATCTCTTACCGTTCACGCGAAAAATCTATTGAGGTCGCACGCCATAAAGCGCTGCGTGCCATGAATATTGCGTT
TGGCATCCTGTTCGTTACCGTATTTTTCTATGCGGTTTCCTTCACCCTGGCGATGGGGCATGACGAAGCGGTGAAAGCCT
ACGAGCAGAATATTTCCGCCCTGGCGATCGCCGCGCAATTTATTAGCGGCGATGGCGCTGGCTGGGTCAAAGTGGTTAGC
GTAATTCTGAACATCTTTGCCGTCATGACCGCCTTCTTTGGCGTTTATTTAGGATTCCGCGAAGCGACGCAAGGCATTGT
GATGAATATCCTGCGCCGTAAAATGCCCGCCGAGAAGATTAAGGAAAATCTGGTACAGCGCGGCATTATGATTTTCGCTA
TTTTGCTGGCCTGGAGCGCCATTGTGCTCAACGCGCCGGTACTGAGCTTCACCTCTATTTGTAGCCCTATCTTCGGTATG
GTGGGCTGTTTAATTCCGGCATGGTTGGTCTACAAGGTTCCCGCATTGCACAAATATAAAGGCGCTTCGTTGTACCTGAT
TATTATTACCGGTCTGCTGCTATGCGTTTCTCCGTTCCTGGCATTCTCTTGA

Upstream 100 bases:

>100_bases
CTTATTACAAGAAAGTACCTGCACCTCACGTTCTGCATATCGCCTTGCTGCGGCACGAAAAATAAAAAAAACCTCTACCT
ACACATTGAGCGAGAATTTT

Downstream 100 bases:

>100_bases
TATACCTGAGATTAAGGTTGTTGTTATGTTTGAATCTAAAATAAATCCATTGTGGCAAAGTTTTATTCTGGCCGTACAGG
AAGAAGTAAAACCGGCGCTG

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MESASNTSVILDASAPARRAGMTESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSIIGYPAMY
LFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGL
VLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSP
MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAGWVKVVS
VILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKIKENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGM
VGCLIPAWLVYKVPALHKYKGASLYLIIITGLLLCVSPFLAFS

Sequences:

>Translated_443_residues
MESASNTSVILDASAPARRAGMTESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSIIGYPAMY
LFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGL
VLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSP
MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAGWVKVVS
VILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKIKENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGM
VGCLIPAWLVYKVPALHKYKGASLYLIIITGLLLCVSPFLAFS
>Mature_443_residues
MESASNTSVILDASAPARRAGMTESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSIIGYPAMY
LFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGL
VLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSP
MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAGWVKVVS
VILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKIKENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGM
VGCLIPAWLVYKVPALHKYKGASLYLIIITGLLLCVSPFLAFS

Specific function: Unknown

COG id: COG0814

COG function: function code E; Amino acid permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693183, Length=443, Percent_Identity=96.1625282167043, Blast_Score=861, Evalue=0.0,
Organism=Escherichia coli, GI1789961, Length=410, Percent_Identity=45.1219512195122, Blast_Score=366, Evalue=1e-102,
Organism=Escherichia coli, GI1789160, Length=422, Percent_Identity=28.436018957346, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1789504, Length=422, Percent_Identity=25.5924170616114, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1789211, Length=411, Percent_Identity=22.6277372262774, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004694 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48430; Mature: 48430

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESASNTSVILDASAPARRAGMTESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQV
CCCCCCCEEEEECCCCHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHH
GLMGLWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYF
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
VMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKI
HHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
STGMVLTKLLVVAALGVSMVGMWHLYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LAIAAQFISGDGAGWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYK
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
GASLYLIIITGLLLCVSPFLAFS
CCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MESASNTSVILDASAPARRAGMTESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQV
CCCCCCCEEEEECCCCHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHH
GLMGLWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYF
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
VMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKI
HHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
STGMVLTKLLVVAALGVSMVGMWHLYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LAIAAQFISGDGAGWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYK
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
GASLYLIIITGLLLCVSPFLAFS
CCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]