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The map label for this gene is yhaN [H]

Identifier: 16766537

GI number: 16766537

Start: 3402015

End: 3403325

Strand: Reverse

Name: yhaN [H]

Synonym: STM3238

Alternate gene names: 16766537

Gene position: 3403325-3402015 (Counterclockwise)

Preceding gene: 16766538

Following gene: 16766534

Centisome position: 70.06

GC content: 56.14

Gene sequence:

>1311_bases
ATGTTTGAATCTAAAATAAATCCATTGTGGCAAAGTTTTATTCTGGCCGTACAGGAAGAAGTAAAACCGGCGCTGGGGTG
TACTGAGCCAATTTCACTGGCGCTGGCGGCAGCGGCGGCGGCGGCTGAACTTAACGGCACAGTTGAACGCATTGACGCGT
GGGTTTCGCCCAATCTGATGAAAAATGGTATGGGCGTTACCGTTCCAGGAACGGGAATGGTAGGGCTACCGATCGCCGCG
GCGTTGGGCGCGTTGGGCGGTGATGCGAAAGCCGGGTTGGAGGTGTTAAAAGACGCTTCCGCTAAAGCCGTTGCCGATGC
AAAAGCGATGCTGGCCGCTGGACATGTCGCGGTGATGTTGCAGGAGCCATGTAACGATATTCTGTTTTCACGGGCGAAAG
TGTATAGCGGCGATAGCTGGGCATGTGTCACGATCGTCGGCGATCATACAAATATTGTGCGGATAGAAACCGACAAGGGT
GTGGTATTTACCCAGGCCGATAATGCGCAGGAAGAAGAAAAAACCTCGCCACTGGGAGTGCTGTCTCATACCTCGCTGGA
AGAGATCCTGGCGTTTGTGAATGCGGTGCCCTTTGACGCTATCCGCTTTATTCTCGATGCGGCCAGGCTAAACGGCGCGT
TGTCGCAGGAGGGACTGCGTGGTTCCTGGGGGCTGCATATCGGTTCGACGCTGGCCAAACAGTGCGATCGCGGTCTGCTG
GCGAAAGATCTCTCCACGGCGATTTTGATCCGTACCAGCGCGGCGTCAGACGCCAGAATGGGCGGTGCCACGTTGCCCGC
GATGAGCAACTCCGGCTCCGGCAACCAGGGGATTACCGCCACGGTGCCAGTCATGGTGGTTGCTGAACATGTCGGCGCCG
ATGACGAGCGCCTGGCGCGCGCGCTAATGTTATCGCATTTGAGCGCTATCTATATTCACCATCAGCTTCCGCGTTTGTCG
GCGCTGTGCGCGGCAACTACGGCGGCGATGGGCGCGGCAGCGGGTATGGCGTGGCTGATAGATGGTCGTTACGACACTAT
CGCAATGGCTATCAGCAGTATGATTGGTGATGTCAGCGGGATGATTTGCGATGGCGCGTCGAATAGCTGCGCGATGAAAG
TCTCTACCAGCGCGTCGGCGGCGTGGAAAGCCGTACTGATGGCGTTGGATGATACGGCGGTGACCGGAAACGAAGGGATT
GTGGCGCACAATGTCGAACAATCTATTTCGAATTTGTGTTCGCTGGCGTGTCGCTCAATGCAGCAGACCGACAAGCAGAT
CATCGAGATTATGGCCAGTAAAGCGCATTAA

Upstream 100 bases:

>100_bases
AAAGGCGCTTCGTTGTACCTGATTATTATTACCGGTCTGCTGCTATGCGTTTCTCCGTTCCTGGCATTCTCTTGATATAC
CTGAGATTAAGGTTGTTGTT

Downstream 100 bases:

>100_bases
TAATAACGCCCCGGCATGACGTCGGGGCAGCGTGTTGCCCGATGGCGCTGCGCTTATCGGGTCTACCCGTTATCAGCCGG
ATCGGGCGCTTGCGCCGCCA

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MFESKINPLWQSFILAVQEEVKPALGCTEPISLALAAAAAAAELNGTVERIDAWVSPNLMKNGMGVTVPGTGMVGLPIAA
ALGALGGDAKAGLEVLKDASAKAVADAKAMLAAGHVAVMLQEPCNDILFSRAKVYSGDSWACVTIVGDHTNIVRIETDKG
VVFTQADNAQEEEKTSPLGVLSHTSLEEILAFVNAVPFDAIRFILDAARLNGALSQEGLRGSWGLHIGSTLAKQCDRGLL
AKDLSTAILIRTSAASDARMGGATLPAMSNSGSGNQGITATVPVMVVAEHVGADDERLARALMLSHLSAIYIHHQLPRLS
ALCAATTAAMGAAAGMAWLIDGRYDTIAMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGI
VAHNVEQSISNLCSLACRSMQQTDKQIIEIMASKAH

Sequences:

>Translated_436_residues
MFESKINPLWQSFILAVQEEVKPALGCTEPISLALAAAAAAAELNGTVERIDAWVSPNLMKNGMGVTVPGTGMVGLPIAA
ALGALGGDAKAGLEVLKDASAKAVADAKAMLAAGHVAVMLQEPCNDILFSRAKVYSGDSWACVTIVGDHTNIVRIETDKG
VVFTQADNAQEEEKTSPLGVLSHTSLEEILAFVNAVPFDAIRFILDAARLNGALSQEGLRGSWGLHIGSTLAKQCDRGLL
AKDLSTAILIRTSAASDARMGGATLPAMSNSGSGNQGITATVPVMVVAEHVGADDERLARALMLSHLSAIYIHHQLPRLS
ALCAATTAAMGAAAGMAWLIDGRYDTIAMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGI
VAHNVEQSISNLCSLACRSMQQTDKQIIEIMASKAH
>Mature_436_residues
MFESKINPLWQSFILAVQEEVKPALGCTEPISLALAAAAAAAELNGTVERIDAWVSPNLMKNGMGVTVPGTGMVGLPIAA
ALGALGGDAKAGLEVLKDASAKAVADAKAMLAAGHVAVMLQEPCNDILFSRAKVYSGDSWACVTIVGDHTNIVRIETDKG
VVFTQADNAQEEEKTSPLGVLSHTSLEEILAFVNAVPFDAIRFILDAARLNGALSQEGLRGSWGLHIGSTLAKQCDRGLL
AKDLSTAILIRTSAASDARMGGATLPAMSNSGSGNQGITATVPVMVVAEHVGADDERLARALMLSHLSAIYIHHQLPRLS
ALCAATTAAMGAAAGMAWLIDGRYDTIAMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGI
VAHNVEQSISNLCSLACRSMQQTDKQIIEIMASKAH

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family [H]

Homologues:

Organism=Escherichia coli, GI48994923, Length=436, Percent_Identity=83.7155963302752, Blast_Score=694, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR021144 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: NA

Molecular weight: Translated: 45154; Mature: 45154

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFESKINPLWQSFILAVQEEVKPALGCTEPISLALAAAAAAAELNGTVERIDAWVSPNLM
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHH
KNGMGVTVPGTGMVGLPIAAALGALGGDAKAGLEVLKDASAKAVADAKAMLAAGHVAVML
HCCCEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEE
QEPCNDILFSRAKVYSGDSWACVTIVGDHTNIVRIETDKGVVFTQADNAQEEEKTSPLGV
HHHHHHHHHHHHHEECCCCEEEEEEEECCCEEEEEECCCCEEEEECCCCCHHHCCCCCCE
LSHTSLEEILAFVNAVPFDAIRFILDAARLNGALSQEGLRGSWGLHIGSTLAKQCDRGLL
ECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHCCCHH
AKDLSTAILIRTSAASDARMGGATLPAMSNSGSGNQGITATVPVMVVAEHVGADDERLAR
HHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHH
ALMLSHLSAIYIHHQLPRLSALCAATTAAMGAAAGMAWLIDGRYDTIAMAISSMIGDVSG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCC
MICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHNVEQSISNLCSLACRSM
EEECCCCCCEEEEEECCHHHHHHHHHHHHCCCEEECCCCEEEECHHHHHHHHHHHHHHHH
QQTDKQIIEIMASKAH
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFESKINPLWQSFILAVQEEVKPALGCTEPISLALAAAAAAAELNGTVERIDAWVSPNLM
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHH
KNGMGVTVPGTGMVGLPIAAALGALGGDAKAGLEVLKDASAKAVADAKAMLAAGHVAVML
HCCCEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEE
QEPCNDILFSRAKVYSGDSWACVTIVGDHTNIVRIETDKGVVFTQADNAQEEEKTSPLGV
HHHHHHHHHHHHHEECCCCEEEEEEEECCCEEEEEECCCCEEEEECCCCCHHHCCCCCCE
LSHTSLEEILAFVNAVPFDAIRFILDAARLNGALSQEGLRGSWGLHIGSTLAKQCDRGLL
ECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHCCCHH
AKDLSTAILIRTSAASDARMGGATLPAMSNSGSGNQGITATVPVMVVAEHVGADDERLAR
HHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHH
ALMLSHLSAIYIHHQLPRLSALCAATTAAMGAAAGMAWLIDGRYDTIAMAISSMIGDVSG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCC
MICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHNVEQSISNLCSLACRSM
EEECCCCCCEEEEEECCHHHHHHHHHHHHCCCEEECCCCEEEECHHHHHHHHHHHHHHHH
QQTDKQIIEIMASKAH
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA