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The map label for this gene is yggG [H]

Identifier: 16766378

GI number: 16766378

Start: 3238660

End: 3239418

Strand: Direct

Name: yggG [H]

Synonym: STM3077

Alternate gene names: 16766378

Gene position: 3238660-3239418 (Clockwise)

Preceding gene: 16766376

Following gene: 16766391

Centisome position: 66.67

GC content: 54.94

Gene sequence:

>759_bases
ATGAAAATTCGCGCTTTACTGCTTGCTTTGGGCATGGCGACGGTGCTGACCGGTTGCCAGAATATGGACTCTAATGGACT
GCTTTCTTCGGGCGCTGAAGCTTTTCAGGCCTATACGTTAAGCGATGCGCAGGTAAAAGCGTTGAGCGATCAATCCTGTC
AAGAGCTCGACAGTAAAGCGAAAATCGCGCCGGCGAGCAGCGAATACACTAAACGACTGGCAAAAATTGCCGCCGCGCTG
GGGGATAACATTAACGGCCAGCCGGTGAACTATAAGGTTTACGAGACGAAAGACGTCAACGCGTTTGCCATGGCGAACGG
TTGTATCCGCGTCTACAGCGGACTGATGGATATGATGACCGACAACGAAGTTGAAGCCGTGATCGGCCATGAAATGGGCC
ATGTCGCGCTGGGTCATGTAAAGAAAGGGATGCAGGTCGCGCTGGGCACTAACGCCGTTCGTGTTGCGGCGGCATCGGCA
GGAGGCGTAGTCGGCAGCCTGTCGCAATCACAGCTTGGCGATCTTGGCGAAAAACTGGTGAACTCGCAGTTCTCTCAGCG
TCAGGAGTCCGAAGCGGATGATTATTCTTACGATCTGTTGCGCAAACGCGGTATCAGTCCGGCAGGACTCGCCACCAGCT
TTGAGAAACTGGCAAAACTGGAAGCGGGTCGTCAAAGCTCGATGTTCGACGATCACCCGGCGTCCGCCGCACGCGCACAG
CATGTGCGCGATCGTATGAGCGCGGACGGGATCAAATAA

Upstream 100 bases:

>100_bases
CTAACTTGCCTGCCATGCTTTTCTTTATACTTAACCCAGGCGCTAATTCATCTGCAACGGGCGCATTTCAAAATAATATT
GATTCGTATGGAAGAGAAAA

Downstream 100 bases:

>100_bases
TCCCCGAACAGTGCCGGATGGCGGCGTGAACGCCTTATCCGGCCTACAAGCATCAATCAGCTGTAGGCCGGATAAGCGCA
GCGCCATCCGGCAAAACAAC

Product: Zn-dependent protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKIRALLLALGMATVLTGCQNMDSNGLLSSGAEAFQAYTLSDAQVKALSDQSCQELDSKAKIAPASSEYTKRLAKIAAAL
GDNINGQPVNYKVYETKDVNAFAMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
GGVVGSLSQSQLGDLGEKLVNSQFSQRQESEADDYSYDLLRKRGISPAGLATSFEKLAKLEAGRQSSMFDDHPASAARAQ
HVRDRMSADGIK

Sequences:

>Translated_252_residues
MKIRALLLALGMATVLTGCQNMDSNGLLSSGAEAFQAYTLSDAQVKALSDQSCQELDSKAKIAPASSEYTKRLAKIAAAL
GDNINGQPVNYKVYETKDVNAFAMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
GGVVGSLSQSQLGDLGEKLVNSQFSQRQESEADDYSYDLLRKRGISPAGLATSFEKLAKLEAGRQSSMFDDHPASAARAQ
HVRDRMSADGIK
>Mature_252_residues
MKIRALLLALGMATVLTGCQNMDSNGLLSSGAEAFQAYTLSDAQVKALSDQSCQELDSKAKIAPASSEYTKRLAKIAAAL
GDNINGQPVNYKVYETKDVNAFAMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
GGVVGSLSQSQLGDLGEKLVNSQFSQRQESEADDYSYDLLRKRGISPAGLATSFEKLAKLEAGRQSSMFDDHPASAARAQ
HVRDRMSADGIK

Specific function: Seems to regulate the expression of speB [H]

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Escherichia coli, GI87082185, Length=252, Percent_Identity=90.4761904761905, Blast_Score=475, Evalue=1e-135,
Organism=Escherichia coli, GI87081800, Length=252, Percent_Identity=58.7301587301587, Blast_Score=302, Evalue=2e-83,
Organism=Escherichia coli, GI1788840, Length=228, Percent_Identity=25.8771929824561, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 26709; Mature: 26709

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRALLLALGMATVLTGCQNMDSNGLLSSGAEAFQAYTLSDAQVKALSDQSCQELDSKA
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
KIAPASSEYTKRLAKIAAALGDNINGQPVNYKVYETKDVNAFAMANGCIRVYSGLMDMMT
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHC
DNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASAGGVVGSLSQSQLGDLGEKLV
CCHHHHHHHHHHCHHHHHHHHCCCEEEECCCHHEEEECCCCCCHHCCCHHHHHHHHHHHH
NSQFSQRQESEADDYSYDLLRKRGISPAGLATSFEKLAKLEAGRQSSMFDDHPASAARAQ
HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
HVRDRMSADGIK
HHHHHHHCCCCC
>Mature Secondary Structure
MKIRALLLALGMATVLTGCQNMDSNGLLSSGAEAFQAYTLSDAQVKALSDQSCQELDSKA
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
KIAPASSEYTKRLAKIAAALGDNINGQPVNYKVYETKDVNAFAMANGCIRVYSGLMDMMT
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHC
DNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASAGGVVGSLSQSQLGDLGEKLV
CCHHHHHHHHHHCHHHHHHHHCCCEEEECCCHHEEEECCCCCCHHCCCHHHHHHHHHHHH
NSQFSQRQESEADDYSYDLLRKRGISPAGLATSFEKLAKLEAGRQSSMFDDHPASAARAQ
HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
HVRDRMSADGIK
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2153656; 9278503; 1310091 [H]