BacMap

Definition	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome.
Accession	NC_003197
Length	4,857,432

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The map label for this gene is cbiO [H]

Identifier: 16766376

GI number: 16766376

Start: 3235693

End: 3236349

Strand: Direct

Name: cbiO [H]

Synonym: STM3075

Alternate gene names: 16766376

Gene position: 3235693-3236349 (Clockwise)

Preceding gene: 16766375

Following gene: 16766378

Centisome position: 66.61

GC content: 58.3

Gene sequence:

>657_bases
ATGTTGACGTTAAATCAGGTCGCTTATCGCTGGCCGGATGCCGCAGCCGACTGTTTGCACGCTATCTCGCTTAAACTTCG
TGACGGCGAATGGCTGGCGTTGACCGGCGATAACGGCGCGGGAAAATCAACGCTGTTACGGATTATGGCCGGCCTGCTTT
CCCCCGCTTCCGGCTCGGTAACGCTTAATGGAGAGCCGATTGCGCAGCTTAAAAATCGTCAACGCGCCGCCGCTATCGGC
GTACTCTTTCAGGAAGCGGAAAACCAGATTTTCCACAGCAATGTCGCGCAAGAGGTCGCTTTTGGGCTGAAACTACAACG
CTTATCGGCGGAGGAAATTTCACGGCGCACGCAGGCCGCGCTGCGGTTATGCCAGCTAACGGACGTCGCCGAGGCACACC
CGCTTGATCTGCACGCCGCACAGCGCCGGATGGTGGCGGTCGCCAGTCTGGAGGCGATAGCGCCGCCTGTGTTATTGCTG
GATGAACCCAGCCGGGATTTTGACGCCCACTGGCTAACCGTATTTGAACACTGGCTGGCGACATGCCGGGCACGGGGAAC
CAGCGTCGTCGCGATTAGCCATGACGCTGCGTTTACCCGGCGTCATTTTTCACGGGTGGTACGGCTGGAAAACGGCAGGT
TGTCAAAGGGAGAATAA

Upstream 100 bases:

>100_bases
AACGTCATTCTCTCATTGTGCTTTTTGAGCGTAATCATTTTCCTTTTCTGACGCGATGCCAGCGGGTATGGCAATTGCGC
GACGGAGCGCTAACCCCATT

Downstream 100 bases:

>100_bases
AAAACGGGTCGCCGAAGCGACCCGTTTTATGCCGTATTAAGGATTACAGCAGTGCTTTCGCTTTGGCGATCACGTTGTCC
ACCGTGAAGCCAAACTCTTC

Product: ABC-type cobalt transport system ATP-binding component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MLTLNQVAYRWPDAAADCLHAISLKLRDGEWLALTGDNGAGKSTLLRIMAGLLSPASGSVTLNGEPIAQLKNRQRAAAIG
VLFQEAENQIFHSNVAQEVAFGLKLQRLSAEEISRRTQAALRLCQLTDVAEAHPLDLHAAQRRMVAVASLEAIAPPVLLL
DEPSRDFDAHWLTVFEHWLATCRARGTSVVAISHDAAFTRRHFSRVVRLENGRLSKGE

Sequences:

>Translated_218_residues
MLTLNQVAYRWPDAAADCLHAISLKLRDGEWLALTGDNGAGKSTLLRIMAGLLSPASGSVTLNGEPIAQLKNRQRAAAIG
VLFQEAENQIFHSNVAQEVAFGLKLQRLSAEEISRRTQAALRLCQLTDVAEAHPLDLHAAQRRMVAVASLEAIAPPVLLL
DEPSRDFDAHWLTVFEHWLATCRARGTSVVAISHDAAFTRRHFSRVVRLENGRLSKGE
>Mature_218_residues
MLTLNQVAYRWPDAAADCLHAISLKLRDGEWLALTGDNGAGKSTLLRIMAGLLSPASGSVTLNGEPIAQLKNRQRAAAIG
VLFQEAENQIFHSNVAQEVAFGLKLQRLSAEEISRRTQAALRLCQLTDVAEAHPLDLHAAQRRMVAVASLEAIAPPVLLL
DEPSRDFDAHWLTVFEHWLATCRARGTSVVAISHDAAFTRRHFSRVVRLENGRLSKGE

Specific function: Part of the ABC transporter complex CbiONQ involved in cobalt import. Responsible for energy coupling to the transport system [H]

COG id: COG1118

COG function: function code P; ABC-type sulfate/molybdate transport systems, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI4505771, Length=227, Percent_Identity=26.8722466960352, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI9961252, Length=227, Percent_Identity=26.8722466960352, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI42741659, Length=227, Percent_Identity=26.8722466960352, Blast_Score=81, Evalue=6e-16,
Organism=Homo sapiens, GI9961250, Length=234, Percent_Identity=26.0683760683761, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI9665248, Length=230, Percent_Identity=28.695652173913, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI89111135, Length=219, Percent_Identity=28.310502283105, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI171184400, Length=225, Percent_Identity=28.4444444444444, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI73747915, Length=225, Percent_Identity=27.1111111111111, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI27477115, Length=152, Percent_Identity=25, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI9955963, Length=189, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=30.4147465437788, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787370, Length=204, Percent_Identity=32.3529411764706, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1789873, Length=207, Percent_Identity=31.8840579710145, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI87081791, Length=195, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1788761, Length=208, Percent_Identity=33.1730769230769, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082267, Length=212, Percent_Identity=28.3018867924528, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789032, Length=197, Percent_Identity=30.9644670050761, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1789891, Length=204, Percent_Identity=31.8627450980392, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1790467, Length=196, Percent_Identity=29.5918367346939, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1786398, Length=200, Percent_Identity=31.5, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1790739, Length=201, Percent_Identity=34.3283582089552, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1786253, Length=200, Percent_Identity=33, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787712, Length=201, Percent_Identity=27.8606965174129, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1787029, Length=220, Percent_Identity=26.3636363636364, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787089, Length=208, Percent_Identity=29.3269230769231, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790525, Length=203, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788225, Length=206, Percent_Identity=27.1844660194175, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI87081709, Length=150, Percent_Identity=31.3333333333333, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1786703, Length=203, Percent_Identity=30.5418719211823, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786803, Length=202, Percent_Identity=29.2079207920792, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI48995001, Length=204, Percent_Identity=29.9019607843137, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787105, Length=222, Percent_Identity=27.4774774774775, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786563, Length=192, Percent_Identity=31.25, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788540, Length=218, Percent_Identity=27.0642201834862, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787164, Length=217, Percent_Identity=31.3364055299539, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787792, Length=203, Percent_Identity=29.5566502463054, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786345, Length=222, Percent_Identity=28.3783783783784, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788506, Length=213, Percent_Identity=29.5774647887324, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788450, Length=212, Percent_Identity=28.3018867924528, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1787759, Length=232, Percent_Identity=26.7241379310345, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1789672, Length=217, Percent_Identity=23.5023041474654, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787547, Length=202, Percent_Identity=23.2673267326733, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI48994883, Length=234, Percent_Identity=24.7863247863248, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787112, Length=221, Percent_Identity=27.1493212669683, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1788210, Length=201, Percent_Identity=28.8557213930348, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786698, Length=217, Percent_Identity=27.1889400921659, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788897, Length=216, Percent_Identity=28.7037037037037, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1786872, Length=190, Percent_Identity=24.7368421052632, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI2367384, Length=185, Percent_Identity=29.1891891891892, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1788053, Length=200, Percent_Identity=30.5, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1787500, Length=209, Percent_Identity=23.9234449760766, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI1788644, Length=215, Percent_Identity=26.9767441860465, Blast_Score=61, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI25146777, Length=223, Percent_Identity=26.0089686098655, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17558664, Length=225, Percent_Identity=24, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17569143, Length=221, Percent_Identity=26.2443438914027, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=230, Percent_Identity=23.4782608695652, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=221, Percent_Identity=23.9819004524887, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=216, Percent_Identity=23.6111111111111, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=226, Percent_Identity=24.7787610619469, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=221, Percent_Identity=23.5294117647059, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=221, Percent_Identity=23.5294117647059, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=197, Percent_Identity=23.8578680203046, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=221, Percent_Identity=23.5294117647059, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24659289, Length=216, Percent_Identity=28.2407407407407, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24666092, Length=195, Percent_Identity=28.7179487179487, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI85724864, Length=226, Percent_Identity=30.5309734513274, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24580555, Length=226, Percent_Identity=30.5309734513274, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI85816269, Length=226, Percent_Identity=30.5309734513274, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24580553, Length=226, Percent_Identity=30.5309734513274, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28573573, Length=148, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28573571, Length=148, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015856
- InterPro:   IPR003593
- InterPro:   IPR005876 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 23903; Mature: 23903

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLNQVAYRWPDAAADCLHAISLKLRDGEWLALTGDNGAGKSTLLRIMAGLLSPASGSV
CCCHHHHHHCCCCHHHHHHHHHHEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEE
TLNGEPIAQLKNRQRAAAIGVLFQEAENQIFHSNVAQEVAFGLKLQRLSAEEISRRTQAA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LRLCQLTDVAEAHPLDLHAAQRRMVAVASLEAIAPPVLLLDEPSRDFDAHWLTVFEHWLA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH
TCRARGTSVVAISHDAAFTRRHFSRVVRLENGRLSKGE
HHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLTLNQVAYRWPDAAADCLHAISLKLRDGEWLALTGDNGAGKSTLLRIMAGLLSPASGSV
CCCHHHHHHCCCCHHHHHHHHHHEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEE
TLNGEPIAQLKNRQRAAAIGVLFQEAENQIFHSNVAQEVAFGLKLQRLSAEEISRRTQAA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LRLCQLTDVAEAHPLDLHAAQRRMVAVASLEAIAPPVLLLDEPSRDFDAHWLTVFEHWLA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH
TCRARGTSVVAISHDAAFTRRHFSRVVRLENGRLSKGE
HHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA