| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16766338
Identifier: 16766338
GI number: 16766338
Start: 3196484
End: 3197290
Strand: Direct
Name: 16766338
Synonym: STM3036
Alternate gene names: NA
Gene position: 3196484-3197290 (Clockwise)
Preceding gene: 16766326
Following gene: 16766340
Centisome position: 65.81
GC content: 51.3
Gene sequence:
>807_bases ATGATAATGAAGGTAAATGCATGGACAATTTTGCTTATGTCGGCGCATCTGACGGCCTGTGCCGTCCCTGGCACAGAAAA ATATCAGACCAGCATGGACAGCGTTACGGCAGAAAAAATAAGCCGGATTATCCAGTCGGATGTCATTCCTTATAAAGGCG AAAACCATGGAGAAGTTATCAGCCGCGTATCGTCTGCTTTTCTCGGAACACCTTATCAGGCGGATACGCTCATCGGTGGG CCCGGCATCCCCGAAGTCCTTGTAGCGAATTTCAACGGCGTGGACTGCTTTACCCTGGCTGATTACGTTGAAGCCCTGGC CCGCAGCGATAATCAGAAATCGTTTCTGCATAATCTTGCCAGGACTCGCTACGCCGCGGGCAAAGTTGCTTATCTCAGCC GCCGGCACTTCTTCTCTGACTGGTTCGCCGCAGCACCGCGTAATGCACGGGATGTAACGCCGGATATCAGCCCTGATTAT GTCGTTGTTGACAAGCAGCTTAACCATAAACCTGATGGCGGCGAGTACATTCCTGGTCTGGGCATCCATCCTCGTAAAAT AAATTACATTCCCGGAAGAGCCATCAACCAGCAGGTCATGAACCACCTAAAAAACGGGGATTATATCGGTGTCTACTCCC CGCTTGACGGGCTGGACGTTTCACATGTGGGTATCGTAGTTCGCCATGATGAACAGGTGTGGTTCAGGAACGCCTCCTCA TTGGCCGCAAACAGAAAAGTGGTGGACACACCGTTTATGGAATACATGCATTCCAGACCGGGCATCGTTGTGCTGCGGGC TGAATGA
Upstream 100 bases:
>100_bases CGTTCATATTACTCAACCTGTAATCAACCTCTGGCGTTTTTCTGTATCCATCACAACCATTTCCGGTAAAGGTAAAAAAG GGATTTGAACCTTTCCGGAG
Downstream 100 bases:
>100_bases TAAAGTCATTACCGGAGTCGCCAGCTGATAATAGCCGTCCGACATAGGTATTGAAACCCTGTGTACTGTGGGGCCGACAC GGAAAATTGCTGTAAATTCG
Product: inner membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MIMKVNAWTILLMSAHLTACAVPGTEKYQTSMDSVTAEKISRIIQSDVIPYKGENHGEVISRVSSAFLGTPYQADTLIGG PGIPEVLVANFNGVDCFTLADYVEALARSDNQKSFLHNLARTRYAAGKVAYLSRRHFFSDWFAAAPRNARDVTPDISPDY VVVDKQLNHKPDGGEYIPGLGIHPRKINYIPGRAINQQVMNHLKNGDYIGVYSPLDGLDVSHVGIVVRHDEQVWFRNASS LAANRKVVDTPFMEYMHSRPGIVVLRAE
Sequences:
>Translated_268_residues MIMKVNAWTILLMSAHLTACAVPGTEKYQTSMDSVTAEKISRIIQSDVIPYKGENHGEVISRVSSAFLGTPYQADTLIGG PGIPEVLVANFNGVDCFTLADYVEALARSDNQKSFLHNLARTRYAAGKVAYLSRRHFFSDWFAAAPRNARDVTPDISPDY VVVDKQLNHKPDGGEYIPGLGIHPRKINYIPGRAINQQVMNHLKNGDYIGVYSPLDGLDVSHVGIVVRHDEQVWFRNASS LAANRKVVDTPFMEYMHSRPGIVVLRAE >Mature_268_residues MIMKVNAWTILLMSAHLTACAVPGTEKYQTSMDSVTAEKISRIIQSDVIPYKGENHGEVISRVSSAFLGTPYQADTLIGG PGIPEVLVANFNGVDCFTLADYVEALARSDNQKSFLHNLARTRYAAGKVAYLSRRHFFSDWFAAAPRNARDVTPDISPDY VVVDKQLNHKPDGGEYIPGLGIHPRKINYIPGRAINQQVMNHLKNGDYIGVYSPLDGLDVSHVGIVVRHDEQVWFRNASS LAANRKVVDTPFMEYMHSRPGIVVLRAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29712; Mature: 29712
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMKVNAWTILLMSAHLTACAVPGTEKYQTSMDSVTAEKISRIIQSDVIPYKGENHGEVI CEEEECHHEEEEEHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH SRVSSAFLGTPYQADTLIGGPGIPEVLVANFNGVDCFTLADYVEALARSDNQKSFLHNLA HHHHHHHCCCCCCCCEEECCCCCCHHEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH RTRYAAGKVAYLSRRHFFSDWFAAAPRNARDVTPDISPDYVVVDKQLNHKPDGGEYIPGL HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC GIHPRKINYIPGRAINQQVMNHLKNGDYIGVYSPLDGLDVSHVGIVVRHDEQVWFRNASS CCCCCEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCHHHHCCHHH LAANRKVVDTPFMEYMHSRPGIVVLRAE HHCCCCCCCCHHHHHHHCCCCEEEEECC >Mature Secondary Structure MIMKVNAWTILLMSAHLTACAVPGTEKYQTSMDSVTAEKISRIIQSDVIPYKGENHGEVI CEEEECHHEEEEEHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH SRVSSAFLGTPYQADTLIGGPGIPEVLVANFNGVDCFTLADYVEALARSDNQKSFLHNLA HHHHHHHCCCCCCCCEEECCCCCCHHEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH RTRYAAGKVAYLSRRHFFSDWFAAAPRNARDVTPDISPDYVVVDKQLNHKPDGGEYIPGL HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC GIHPRKINYIPGRAINQQVMNHLKNGDYIGVYSPLDGLDVSHVGIVVRHDEQVWFRNASS CCCCCEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCHHHHCCHHH LAANRKVVDTPFMEYMHSRPGIVVLRAE HHCCCCCCCCHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA