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The map label for this gene is idi [H]

Identifier: 16766340

GI number: 16766340

Start: 3198598

End: 3199143

Strand: Direct

Name: idi [H]

Synonym: STM3039

Alternate gene names: 16766340

Gene position: 3198598-3199143 (Clockwise)

Preceding gene: 16766338

Following gene: 16766346

Centisome position: 65.85

GC content: 52.01

Gene sequence:

>546_bases
ATGACTGAGGAACATGTCGTTTTATTGGATGAGCAGGATAAGCCTTCCGGCACACTGGAAAAGTATGCGGCTCATACGCT
TAATACGCCTTTGCATCTGGCTTTCTCCTGCTGGCTATTTAACGAAGATGGTCAGTTGCTGGTAACACGACGGTCGCTGA
GCAAGAAAGCCTGGCCAGGCGTGTGGACGAATTCGGTTTGCGGTCATCCGCAACAAGGCGAAACCACCGAAGAGGCGATC
ATCCGCCGTTGTCGGTTCGAACTCGGCGTGGAAATTACCGATCTCACCCCCGTCTATCCGCACTTCAGCTATCGAGCGAC
AGATCCAAACGGTATTGTGGAAAATGAAGTCTGTCCGGTATTTGCCGCGCGGGCAACCAGTGTGTTACAGGTTAACAGCG
AAGAGGTGATGGACTATCAGTGGAGCGAATTTAAAAGCGTATGGAAAAGCCTTCTCGCTACGCCGTGGGCATTTAGCCCG
TGGATGGTCATGCAAGCGTCAGACGAACAAGCGCGTGAACGACTGCTCAATTACTGCCAGCGTTAA

Upstream 100 bases:

>100_bases
CTGTTTTGGTAATGCCTTTCTTTCTGTTATGCGCTACGCTGATCGTCTGAGTATATGGCCTGGCCATGCTGCCGGGTCAT
TTTAATTTTCAGGAGCTTTC

Downstream 100 bases:

>100_bases
AGATTGCCTGATGGCGCTACGCCTGAACGAAGAGATGCCGGATGGCGGCTGATGCCCCATCCGGCAATTTACATCTTATT
TCACCGGACGCATCGCCGGG

Product: isopentenyl-diphosphate delta-isomerase

Products: NA

Alternate protein names: IPP isomerase; IPP:DMAPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTEEHVVLLDEQDKPSGTLEKYAAHTLNTPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHPQQGETTEEAI
IRRCRFELGVEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWAFSP
WMVMQASDEQARERLLNYCQR

Sequences:

>Translated_181_residues
MTEEHVVLLDEQDKPSGTLEKYAAHTLNTPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHPQQGETTEEAI
IRRCRFELGVEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWAFSP
WMVMQASDEQARERLLNYCQR
>Mature_180_residues
TEEHVVLLDEQDKPSGTLEKYAAHTLNTPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHPQQGETTEEAII
RRCRFELGVEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWAFSPW
MVMQASDEQARERLLNYCQR

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1443

COG function: function code I; Isopentenyldiphosphate isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1789255, Length=180, Percent_Identity=70.5555555555556, Blast_Score=275, Evalue=9e-76,
Organism=Caenorhabditis elegans, GI17554092, Length=179, Percent_Identity=26.8156424581006, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6325140, Length=190, Percent_Identity=28.9473684210526, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281362205, Length=181, Percent_Identity=26.5193370165746, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24648688, Length=181, Percent_Identity=26.5193370165746, Blast_Score=70, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011876
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 20782; Mature: 20650

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEEHVVLLDEQDKPSGTLEKYAAHTLNTPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPG
CCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEECHHCCCCCCC
VWTNSVCGHPQQGETTEEAIIRRCRFELGVEITDLTPVYPHFSYRATDPNGIVENEVCPV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCCCEEECCCCCCCCCCCCCHH
FAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWAFSPWMVMQASDEQARERLLNYCQ
HHHHHHHEEEECHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHC
R
C
>Mature Secondary Structure 
TEEHVVLLDEQDKPSGTLEKYAAHTLNTPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPG
CCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEECHHCCCCCCC
VWTNSVCGHPQQGETTEEAIIRRCRFELGVEITDLTPVYPHFSYRATDPNGIVENEVCPV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCCCEEECCCCCCCCCCCCCHH
FAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWAFSPWMVMQASDEQARERLLNYCQ
HHHHHHHEEEECHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA