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The map label for this gene is virK [H]

Identifier: 16766092

GI number: 16766092

Start: 2928373

End: 2929302

Strand: Direct

Name: virK [H]

Synonym: STM2781

Alternate gene names: 16766092

Gene position: 2928373-2929302 (Clockwise)

Preceding gene: 16766088

Following gene: 16766093

Centisome position: 60.29

GC content: 44.52

Gene sequence:

>930_bases
ATGACGATGCAGCAAAGTGATATGGAAAGATATAATCCATTATTAATGTTAAAAGAAGTCATGGCGCAGACGCCTTATCG
CCATAAACGCTGGGGAGAGCGTAAGTTTCGTTATAAATTTTTATTACGTTGCCTTATTAACCCCGTAACGACAATTAAAT
ACTTCAATGAATTATGCCATCTGTCTCAGCCCAGAACGCTGATTATTCATCGTCCACTGTTGCCGGCAAAAATCCAGCGG
CCCTATTTGTATACCGGGCTTAGCATACGTTGCCGGGCAAAAGCTATTCTGGAACACTACCAGTTCGTTCAGTCCTTTCC
GGAAAGTAAAATTAAAAAGATCCTCCTGTCCGAGGAACAAATCTTACTCGCTCACCTGGAAGGAAAAAACGGTGCTCTGG
TAGATATCTACTGCGGTCCCTGTGGCTATGACAGAGAAGGTGAACTGACATTAACGCTGTGCTTCAATGATACGCCGTTG
GCACGTTTATCATTTTCCTTTATCCGCCATGAAGGGAAGCAAATAGCGCTGGTTGCCGGGTTACAAGGGCCCAGTAAACA
TATCGGCCCACAAGTCATACGTAACGCCACCAAAGATTGTTACGGTCTCTTTCCTAAACGGATGCTGTATGAAGCATTTG
CGACATTGATGCAGGCCTGTAATGTCGACGAGATTTATGCGGTCAGTGAAAACAACCATGTTTATCGTCAACTCCGGTAC
TTATTCCAGAAGAAAAAAACTTTTGTGGCCAGCTATAGTGAATTCTGGGAGTCGCTAAACGGCGTTAAGAAAGGTGCCTT
ATATCATCTGCCATCACAGGTGATGCGTAAAGCGCCTGAAAGTATCCCCAGCAAAAAACGCGCAGAGTATCGGAAACGCT
ATCATATTCTGGATACAATAATACAAGAGGTCAACAGCCTCTCCCGGTAG

Upstream 100 bases:

>100_bases
TTAACAACATCGTCTGTACAGACCTTCTTCGTTGCCTTTACGTTTAACTCAATCAGGCTACCGTCTCGGTTATAAGTCTA
TCGAGTAGTAGAGCCGTAGT

Downstream 100 bases:

>100_bases
AACTATTTCATACGCGGATGTGCAGATCCTGCTACCGTTCAGCGGATCTTTTGAAATCTGTATCGCTACTGGATGGTTAA
ATACAGAATGGCTTGCGAGT

Product: virulence protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTMQQSDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFLLRCLINPVTTIKYFNELCHLSQPRTLIIHRPLLPAKIQR
PYLYTGLSIRCRAKAILEHYQFVQSFPESKIKKILLSEEQILLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDTPL
ARLSFSFIRHEGKQIALVAGLQGPSKHIGPQVIRNATKDCYGLFPKRMLYEAFATLMQACNVDEIYAVSENNHVYRQLRY
LFQKKKTFVASYSEFWESLNGVKKGALYHLPSQVMRKAPESIPSKKRAEYRKRYHILDTIIQEVNSLSR

Sequences:

>Translated_309_residues
MTMQQSDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFLLRCLINPVTTIKYFNELCHLSQPRTLIIHRPLLPAKIQR
PYLYTGLSIRCRAKAILEHYQFVQSFPESKIKKILLSEEQILLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDTPL
ARLSFSFIRHEGKQIALVAGLQGPSKHIGPQVIRNATKDCYGLFPKRMLYEAFATLMQACNVDEIYAVSENNHVYRQLRY
LFQKKKTFVASYSEFWESLNGVKKGALYHLPSQVMRKAPESIPSKKRAEYRKRYHILDTIIQEVNSLSR
>Mature_308_residues
TMQQSDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFLLRCLINPVTTIKYFNELCHLSQPRTLIIHRPLLPAKIQRP
YLYTGLSIRCRAKAILEHYQFVQSFPESKIKKILLSEEQILLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDTPLA
RLSFSFIRHEGKQIALVAGLQGPSKHIGPQVIRNATKDCYGLFPKRMLYEAFATLMQACNVDEIYAVSENNHVYRQLRYL
FQKKKTFVASYSEFWESLNGVKKGALYHLPSQVMRKAPESIPSKKRAEYRKRYHILDTIIQEVNSLSR

Specific function: Unknown

COG id: COG2990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0461 [H]

Homologues:

Organism=Escherichia coli, GI1787103, Length=284, Percent_Identity=39.0845070422535, Blast_Score=192, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007488 [H]

Pfam domain/function: PF04393 DUF535 [H]

EC number: NA

Molecular weight: Translated: 36102; Mature: 35971

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMQQSDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFLLRCLINPVTTIKYFNELCH
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
LSQPRTLIIHRPLLPAKIQRPYLYTGLSIRCRAKAILEHYQFVQSFPESKIKKILLSEEQ
CCCCCEEEEECCCCCHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
ILLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDTPLARLSFSFIRHEGKQIALVAG
EEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
LQGPSKHIGPQVIRNATKDCYGLFPKRMLYEAFATLMQACNVDEIYAVSENNHVYRQLRY
CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
LFQKKKTFVASYSEFWESLNGVKKGALYHLPSQVMRKAPESIPSKKRAEYRKRYHILDTI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHCHHCCCCHHHHHHHHHHHHHHHH
IQEVNSLSR
HHHHHHCCC
>Mature Secondary Structure 
TMQQSDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFLLRCLINPVTTIKYFNELCH
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
LSQPRTLIIHRPLLPAKIQRPYLYTGLSIRCRAKAILEHYQFVQSFPESKIKKILLSEEQ
CCCCCEEEEECCCCCHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
ILLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDTPLARLSFSFIRHEGKQIALVAG
EEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
LQGPSKHIGPQVIRNATKDCYGLFPKRMLYEAFATLMQACNVDEIYAVSENNHVYRQLRY
CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
LFQKKKTFVASYSEFWESLNGVKKGALYHLPSQVMRKAPESIPSKKRAEYRKRYHILDTI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHCHHCCCCHHHHHHHHHHHHHHHH
IQEVNSLSR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]