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The map label for this gene is yrbE [H]

Identifier: 16766065

GI number: 16766065

Start: 2891101

End: 2892114

Strand: Direct

Name: yrbE [H]

Synonym: STM2753

Alternate gene names: 16766065

Gene position: 2891101-2892114 (Clockwise)

Preceding gene: 16766064

Following gene: 16766066

Centisome position: 59.52

GC content: 59.66

Gene sequence:

>1014_bases
ATGAACAAAATCAGAGCCGCCGTGGTGGGTGCAGGTATCTACGGCAAACACCATATGAACGCGTACCGCCATAACCCGGA
CACCGTGCTGGTTGCCATCTGCGACACCGATACAGAACGTTGTGACGACCTTGCCATGGCGTACGGGATCCAGGGCTACA
CACGACTGGATCGGTTACTACAGCAGGAGGCTATTGATATCGTCTCGGTGGCGACACCGGATCCGTACCATACCGAATCC
ATCCTCACCGCCCTGCGCCACGGTCAGCATGTACTGGCGGAAAAACCGCTCGCCACCTCAGTACGCGAGTGTGAGCTTAT
CGTGGAGATGGCGCAGCAGCGGGACCTGCTGGTCGGCGTCGATTTCCACAAACGCTGGGACCCGGCAGTAATGCGCATTA
AAGCCGAACTGGAAAATCCGGAGACCGGATGCATCCTGCGCGGCCATATCAGCATGGACGACGTGATAACGGTCCCGACG
CAGTGGCTGAACTGGGCGGGCGCAAGCTCCCCGGTGTGGTTTCTCGGTTCCCACTGCTTTGACCTGGTGCGCCACCTCTC
CGGGCAGGAGGTGGTATCGGTGTACGCCGTCGGACAGAAGCGGCTGATGGTCGAATGCGGCCTCGACACCTTCGACAGCG
TGCAGAGCCTGCTGACAATGGCCGACGGCAGTTCGTGGGGGGTGGAAAACTCATGGGTGCTGCCGGAGGGCTTTCCGAAG
GACAACGACGGGCGCATCGACATTCTCTGCGAGGCAACCTATATCCGCAGTACTTCCCAACATCGCGGGCTGGAAATCAC
CACGCCGGCCTTGACGCTCACGCCCAACAGCTATTTCATCAACTACCGCAACGGCGTTGCCAGCGGCTTTGGTATCGACC
CGATCAATGATTTTGTGCGGGCGGTCAGACATAAAGCCCCCTACCCGGTCACCGCCGAAGACGGGCTGGCGGTGAGCAGG
ATCTGCGAGGCGGTACACCGCAGCCTTGAGAGCGGGAAACCTGAAGATGTTTAA

Upstream 100 bases:

>100_bases
AAGGGCGTCCCTGCCTTTCTGCTCTCACGTCAGTTAACGGGGCCGCTGGCGGTCATCATCGGCTGGCTGTTTTCCCTGGG
CTTATTCTGAGGACATCATC

Downstream 100 bases:

>100_bases
ACAAACGGCGCAGGGTAGCTCCCTGTGCCAGTTCCATATGATTTTGCTAATTCTACTTACTGGTCTATTCACTCGTCAGG
CTTTGGCCCGCAGATATATT

Product: dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGIQGYTRLDRLLQQEAIDIVSVATPDPYHTES
ILTALRHGQHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDPAVMRIKAELENPETGCILRGHISMDDVITVPT
QWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWGVENSWVLPEGFPK
DNDGRIDILCEATYIRSTSQHRGLEITTPALTLTPNSYFINYRNGVASGFGIDPINDFVRAVRHKAPYPVTAEDGLAVSR
ICEAVHRSLESGKPEDV

Sequences:

>Translated_337_residues
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGIQGYTRLDRLLQQEAIDIVSVATPDPYHTES
ILTALRHGQHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDPAVMRIKAELENPETGCILRGHISMDDVITVPT
QWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWGVENSWVLPEGFPK
DNDGRIDILCEATYIRSTSQHRGLEITTPALTLTPNSYFINYRNGVASGFGIDPINDFVRAVRHKAPYPVTAEDGLAVSR
ICEAVHRSLESGKPEDV
>Mature_337_residues
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGIQGYTRLDRLLQQEAIDIVSVATPDPYHTES
ILTALRHGQHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDPAVMRIKAELENPETGCILRGHISMDDVITVPT
QWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWGVENSWVLPEGFPK
DNDGRIDILCEATYIRSTSQHRGLEITTPALTLTPNSYFINYRNGVASGFGIDPINDFVRAVRHKAPYPVTAEDGLAVSR
ICEAVHRSLESGKPEDV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=144, Percent_Identity=30.5555555555556, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37356; Mature: 37356

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGIQGYTRLDRLL
CCCCEEEEEECCCCCHHHCHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHH
QQEAIDIVSVATPDPYHTESILTALRHGQHVLAEKPLATSVRECELIVEMAQQRDLLVGV
HHHHHCEEEECCCCCCHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEE
DFHKRWDPAVMRIKAELENPETGCILRGHISMDDVITVPTQWLNWAGASSPVWFLGSHCF
CCCCCCCHHHEEEEEECCCCCCCEEEEECCCCCCEEECCHHHHHCCCCCCCHHHHHHHHH
DLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWGVENSWVLPEGFPK
HHHHHCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCC
DNDGRIDILCEATYIRSTSQHRGLEITTPALTLTPNSYFINYRNGVASGFGIDPINDFVR
CCCCCEEEEEEEHHHCCCCCCCCEEEECCEEEECCCCEEEEECCCCCCCCCCCHHHHHHH
AVRHKAPYPVTAEDGLAVSRICEAVHRSLESGKPEDV
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGIQGYTRLDRLL
CCCCEEEEEECCCCCHHHCHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHH
QQEAIDIVSVATPDPYHTESILTALRHGQHVLAEKPLATSVRECELIVEMAQQRDLLVGV
HHHHHCEEEECCCCCCHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEE
DFHKRWDPAVMRIKAELENPETGCILRGHISMDDVITVPTQWLNWAGASSPVWFLGSHCF
CCCCCCCHHHEEEEEECCCCCCCEEEEECCCCCCEEECCHHHHHCCCCCCCHHHHHHHHH
DLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWGVENSWVLPEGFPK
HHHHHCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCC
DNDGRIDILCEATYIRSTSQHRGLEITTPALTLTPNSYFINYRNGVASGFGIDPINDFVR
CCCCCEEEEEEEHHHCCCCCCCCEEEECCEEEECCCCEEEEECCCCCCCCCCCHHHHHHH
AVRHKAPYPVTAEDGLAVSRICEAVHRSLESGKPEDV
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]