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The map label for this gene is arnE

Identifier: 16765629

GI number: 16765629

Start: 2410611

End: 2410946

Strand: Direct

Name: arnE

Synonym: STM2302

Alternate gene names: 16765629

Gene position: 2410611-2410946 (Clockwise)

Preceding gene: 16765628

Following gene: 16765630

Centisome position: 49.63

GC content: 60.12

Gene sequence:

>336_bases
ATGATCGGCGTCGTTCTGGTGCTTGCCAGTCTGCTCAGCGTTGGCGGTCAGCTCTGCCAGAAGCAAGCGACACGGCCATT
GACGGCGGGCGGACGCCGCCGTCACCTGATGCTGTGGCTGGGCCTGGCGCTGATATGCATGGGCGCAGCGATGGTGCTGT
GGCTGCTGGTGCTACAAACCCTGCCGGTGGGAATTGCTTACCCGATGTTGAGTCTGAATTTTGTCTGGGTCACGCTGGCG
GCCTGGAAAATCTGGCATGAACAGGTTCCGCCCCGCCACTGGTTGGGCGTCGCATTGATTATCAGCGGCATTATCATTCT
GGGGAGTGCGGCATAA

Upstream 100 bases:

>100_bases
TTTCAATAGCCAAAGATGAAGACATCAGCGCTCTTTCCCTTCCCCCTGCGGACAATATTGATTATCAGGGGCGTCTGGTG
TTAATTCAGTATCGGCCTAA

Downstream 100 bases:

>100_bases
TGGGCGTAATGTGGGGACTGATAAGCGTTGCGATTGCCTCCCTCGCCCAGTTGAGTTTAGGATTCGCCATGATGCGACTG
CCATCGATAGCGCATCCACT

Product: inner membrane protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnE; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnE

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MIGVVLVLASLLSVGGQLCQKQATRPLTAGGRRRHLMLWLGLALICMGAAMVLWLLVLQTLPVGIAYPMLSLNFVWVTLA
AWKIWHEQVPPRHWLGVALIISGIIILGSAA

Sequences:

>Translated_111_residues
MIGVVLVLASLLSVGGQLCQKQATRPLTAGGRRRHLMLWLGLALICMGAAMVLWLLVLQTLPVGIAYPMLSLNFVWVTLA
AWKIWHEQVPPRHWLGVALIISGIIILGSAA
>Mature_111_residues
MIGVVLVLASLLSVGGQLCQKQATRPLTAGGRRRHLMLWLGLALICMGAAMVLWLLVLQTLPVGIAYPMLSLNFVWVTLA
AWKIWHEQVPPRHWLGVALIISGIIILGSAA

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain

Homologues:

Organism=Escherichia coli, GI87082074, Length=110, Percent_Identity=73.6363636363636, Blast_Score=139, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARNE_SALA4 (B5EZI1)

Other databases:

- EMBL:   CP001138
- RefSeq:   YP_002147258.1
- ProteinModelPortal:   B5EZI1
- GeneID:   6793259
- GenomeReviews:   CP001138_GR
- KEGG:   sea:SeAg_B2438
- HOGENOM:   HBG682839
- OMA:   YPMLSIN
- ProtClustDB:   PRK15051
- GO:   GO:0006810
- HAMAP:   MF_01869
- InterPro:   IPR000620
- InterPro:   IPR022883

Pfam domain/function: PF00892 DUF6

EC number: NA

Molecular weight: Translated: 12045; Mature: 12045

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x101e7e78)-; HASH(0xfe04bd8)-; HASH(0xfd6fe18)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGVVLVLASLLSVGGQLCQKQATRPLTAGGRRRHLMLWLGLALICMGAAMVLWLLVLQT
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPVGIAYPMLSLNFVWVTLAAWKIWHEQVPPRHWLGVALIISGIIILGSAA
HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MIGVVLVLASLLSVGGQLCQKQATRPLTAGGRRRHLMLWLGLALICMGAAMVLWLLVLQT
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPVGIAYPMLSLNFVWVTLAAWKIWHEQVPPRHWLGVALIISGIIILGSAA
HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA