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The map label for this gene is fliT

Identifier: 16765300

GI number: 16765300

Start: 2051227

End: 2051595

Strand: Direct

Name: fliT

Synonym: STM1962

Alternate gene names: 16765300

Gene position: 2051227-2051595 (Clockwise)

Preceding gene: 16765299

Following gene: 16765301

Centisome position: 42.23

GC content: 50.68

Gene sequence:

>369_bases
ATGACCTCAACCGTGGAGTTTATCAACCGTTGGCAGCGTATTGCGCTGCTCAGTCAATCGCTGCTTGAACTTGCGCAGCG
AGGTGAATGGGATCTCTTACTGCAACAAGAGGTCTCCTATCTGCAAAGTATTGAAACGGTGATGGAAAAGCAAACTCCAC
CGGGCATTACGCGAAGTATTCAGGATATGGTCGCCGGATACATCAAACAAACGCTGGACAATGAGCAGCTCCTGAAAGGG
CTGCTGCAACAGCGACTGGATGAACTGAGTAGTTTGATCGGACAATCCACCCGCCAAAAATCACTCAACAACGCGTATGG
CCGTCTTTCCGGTATGTTACTCGTGCCAGATGCGCCTGGCGCCTCATAA

Upstream 100 bases:

>100_bases
ACGACGCTCAGGCCATCGAAGAAGTGGAAGGGTTACTCAGCAATATTGCAGAAGCCTGGAAGCAGATTTCACCGAAAGCA
TCTTTCCAGGAGTCTCGTTA

Downstream 100 bases:

>100_bases
TATTTTCCCGTCTCGTATGAAAATTCTTCCATACTCCAGAGGTCGGCTAAACGACTTCTGGAGCACGGAAGATGAAAAAC
CCCACGTTATTGCAGTACTT

Product: flagellar biosynthesis protein FliT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MTSTVEFINRWQRIALLSQSLLELAQRGEWDLLLQQEVSYLQSIETVMEKQTPPGITRSIQDMVAGYIKQTLDNEQLLKG
LLQQRLDELSSLIGQSTRQKSLNNAYGRLSGMLLVPDAPGAS

Sequences:

>Translated_122_residues
MTSTVEFINRWQRIALLSQSLLELAQRGEWDLLLQQEVSYLQSIETVMEKQTPPGITRSIQDMVAGYIKQTLDNEQLLKG
LLQQRLDELSSLIGQSTRQKSLNNAYGRLSGMLLVPDAPGAS
>Mature_121_residues
TSTVEFINRWQRIALLSQSLLELAQRGEWDLLLQQEVSYLQSIETVMEKQTPPGITRSIQDMVAGYIKQTLDNEQLLKGL
LQQRLDELSSLIGQSTRQKSLNNAYGRLSGMLLVPDAPGAS

Specific function: Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein fliD. As a transcriptional regulator, acts as an anti-flhDC factor; it directly binds flhC, thus

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm, cytosol

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliT family

Homologues:

Organism=Escherichia coli, GI1788235, Length=106, Percent_Identity=35.8490566037736, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIT_SALA4 (B5F2S6)

Other databases:

- EMBL:   CP001138
- RefSeq:   YP_002146062.1
- ProteinModelPortal:   B5F2S6
- PRIDE:   B5F2S6
- GeneID:   6793683
- GenomeReviews:   CP001138_GR
- KEGG:   sea:SeAg_B1158
- HOGENOM:   HBG677331
- OMA:   RMDELSS
- ProtClustDB:   PRK10548
- GO:   GO:0005829
- GO:   GO:0019861
- GO:   GO:0006350
- HAMAP:   MF_01180
- InterPro:   IPR008622

Pfam domain/function: PF05400 FliT

EC number: NA

Molecular weight: Translated: 13705; Mature: 13574

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTVEFINRWQRIALLSQSLLELAQRGEWDLLLQQEVSYLQSIETVMEKQTPPGITRSI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QDMVAGYIKQTLDNEQLLKGLLQQRLDELSSLIGQSTRQKSLNNAYGRLSGMLLVPDAPG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEECCCCCC
AS
CC
>Mature Secondary Structure 
TSTVEFINRWQRIALLSQSLLELAQRGEWDLLLQQEVSYLQSIETVMEKQTPPGITRSI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QDMVAGYIKQTLDNEQLLKGLLQQRLDELSSLIGQSTRQKSLNNAYGRLSGMLLVPDAPG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEECCCCCC
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA