| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is 16765282
Identifier: 16765282
GI number: 16765282
Start: 2034780
End: 2035112
Strand: Reverse
Name: 16765282
Synonym: STM1941
Alternate gene names: NA
Gene position: 2035112-2034780 (Counterclockwise)
Preceding gene: 16765283
Following gene: 16765281
Centisome position: 41.9
GC content: 36.94
Gene sequence:
>333_bases ATGCTGATATGTTTTATGCCTGCTTTATTAAAGAGAGTAGGTCTGCCAGTGAAATATACCGATAATGCAAAATTATTTAT TAGCTTCATTAATATTGGGATTGTAGGTTGCGCTTTGCTACTTTTTTTTATTTTGTATGAGCCTGAGAGTGCAATCGTAA CCTACTCTTTTCCAGGAGAGCTTTCCTCTTCGACATGTGATGCGCGTAATTTTATTGGCTACGTCGATGAAAACGACTTT GCAGAGTATATAAAAAAAGTAGAACTGACGCGCTACAGTATGTATTGTCTGAAAAAAACAGGGGCGGGTCAGTGGAGTAT TTATGCAAATTAA
Upstream 100 bases:
>100_bases AGTACAACAGTTATGTGCTACCGACCCGCAAGAACTTATGCCTGGTAATTACTAAACGTCGGGTAAATCAGCCGATAAAA TCCATTAATCTCTATAAAAA
Downstream 100 bases:
>100_bases ACGAGTATATAACTGTTCAGGGTGTTTTCTGCACAGTTTAATTAAAGGTAGATAGCGAACTAATATTCATCATAAGGTAA TGTGATCCGCATCATGCTTT
Product: inner membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MLICFMPALLKRVGLPVKYTDNAKLFISFINIGIVGCALLLFFILYEPESAIVTYSFPGELSSSTCDARNFIGYVDENDF AEYIKKVELTRYSMYCLKKTGAGQWSIYAN
Sequences:
>Translated_110_residues MLICFMPALLKRVGLPVKYTDNAKLFISFINIGIVGCALLLFFILYEPESAIVTYSFPGELSSSTCDARNFIGYVDENDF AEYIKKVELTRYSMYCLKKTGAGQWSIYAN >Mature_110_residues MLICFMPALLKRVGLPVKYTDNAKLFISFINIGIVGCALLLFFILYEPESAIVTYSFPGELSSSTCDARNFIGYVDENDF AEYIKKVELTRYSMYCLKKTGAGQWSIYAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12436; Mature: 12436
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLICFMPALLKRVGLPVKYTDNAKLFISFINIGIVGCALLLFFILYEPESAIVTYSFPGE CEEEHHHHHHHHCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC LSSSTCDARNFIGYVDENDFAEYIKKVELTRYSMYCLKKTGAGQWSIYAN CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEC >Mature Secondary Structure MLICFMPALLKRVGLPVKYTDNAKLFISFINIGIVGCALLLFFILYEPESAIVTYSFPGE CEEEHHHHHHHHCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC LSSSTCDARNFIGYVDENDFAEYIKKVELTRYSMYCLKKTGAGQWSIYAN CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA