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The map label for this gene is 16765281

Identifier: 16765281

GI number: 16765281

Start: 2033128

End: 2034567

Strand: Reverse

Name: 16765281

Synonym: STM1940

Alternate gene names: NA

Gene position: 2034567-2033128 (Counterclockwise)

Preceding gene: 16765282

Following gene: 16765280

Centisome position: 41.89

GC content: 48.47

Gene sequence:

>1440_bases
ATGATGATGCAAAAGAAAACCTGGGCCGTTTTATTGATACCATTGTGCCTCACCGCTTGCCACCAGACGACCTACCGATC
AACAGCCAAAGATGAAATTTTCACAGGGAGCTATATTGACCCGACAAAAACACGCTTTCCGTTAGCGGATTATTCACAGT
CGGTTGATAAATGGATACCTCCGGACTCGGCTGATTACACTATTCCGGTTATTGATAATGCTACCCAACAACGCTACTTT
AACGCACTAAAATCTCATTATTTCGGAATGGACAGTGAAGCGCACTCGCCGTGGAATGGTTTTTATATTACCGCATTGCT
GAAAAAAAACGCAGCACAGGCGCGGGATGCCAGTATTAAGCAGTTTCTTAGCGACGGCAGTGCTTATTGGGGGGAAAACT
TCAGACTTTATACCTCTCGCTGGAAAGAGGAGGTTAGAGGGAATACGGATACGCAGATTGACAATATCTATCATGCCTCC
CGGCGAGGTATTATGGTCAGAGAAAGTTTAGTCAGAGCGCTGCCAACGGACGACCCGCTCTTTAACGATCCCCGTCAGGC
GGGCGAGGGGTACCCGTTTGATAATTTACAAATGTCTTCGCTGCGTCCCGGTACGCCGGTCTATACGCTGACGAAGAGCA
AAGACCAACGCTGGCAATATGTCGTTTCACCAGCGGTAACTGGCTGGGTTCATAGTGAAGATATTGCCAGTACGGATCAG
AAATTTATAACACAGTGGGTTTTGCTTGCTCATAAGCAACTGGGGGCATTTATCAACGCGCCGGTTTCTGTCCATGTCGC
AGGCGTCTATTATTTCACCGGGCGACCGGGCACTATTTTACCGTTCCGACATCAACGGGCGGGCCAGTTCCTGATTGCGG
CGCCAGTTCGCGGCAGCAACGGTCGCGCGTTTATCCATTGGGTCTGGCTAAGCGGTAACGAGTTTACGGCTATGCCGTGG
AAAATGACGCCGGAAAATATCGCCGTGCTAATGAAAGCAATGTACGGCGCCCCCTACGGTTGGGGAAATTTTAACTTTTA
TAATGATTGTTCAGCCGAAATCCGCAGCCTGTTAATGCCGTTTGGCATATTCCTGCCCAGACATTCATCCGCGCAGGTAG
AGGCTGCTGGACGGGTGGTCGATCTTAGTCATAAAAGTCCCCAAATGCGGATCGATTATCTCACCAGATACGGAAAACCG
TTTACTACGCTGGTCTATATTCCAGGGCATATTATGCTGTATATCGGTAACACAACCATGAATGGGCAGGTCGTGCCGAT
GACTTATCAGAATATCTGGGGATTGCGCCCAAACCATGCTAATAGCCGGAGCATTATCGGTGAGGCGGTATTTTTGCCGT
TACTGCGTTTTTATCCTGAAAGTCCTGAGCTGATATCACTGGCTGGTAAGGTTCTGTTTAAGCTTGGTTATATAGAATAG

Upstream 100 bases:

>100_bases
CAATATTGTCTTAATAACAGGTCAACTACAGATAATTTCAGGTTTTCGTGAATGGCGGTTTTGGTCAGTCTCTATATTAT
GCTTTCCCCGCTTTACGGAG

Downstream 100 bases:

>100_bases
GTTGACAAACTGTGTTATCGCGGAAGACATGATTAAGGCAACCGTGCGCGTGGATATAAAGAGAGTATCCCTGTAAACTG
TGTCTGAAAAAAGTATGCGC

Product: cell wall-associated hydrolase

Products: NA

Alternate protein names: Lipoprotein; Cell Wall-Associated Hydrolase; NLP/P60 Family Lipoprotein; Cell Wall-Associated Hydrolases; NlpC/P60 Family Protein; Nlp/P60 Protein; Cell Wall-Associated Hydrolase Protein; Lipoprotein NLP/P60 Family; DNA Gyrase Subunit A; NlpC-P60 Family Protein

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MMMQKKTWAVLLIPLCLTACHQTTYRSTAKDEIFTGSYIDPTKTRFPLADYSQSVDKWIPPDSADYTIPVIDNATQQRYF
NALKSHYFGMDSEAHSPWNGFYITALLKKNAAQARDASIKQFLSDGSAYWGENFRLYTSRWKEEVRGNTDTQIDNIYHAS
RRGIMVRESLVRALPTDDPLFNDPRQAGEGYPFDNLQMSSLRPGTPVYTLTKSKDQRWQYVVSPAVTGWVHSEDIASTDQ
KFITQWVLLAHKQLGAFINAPVSVHVAGVYYFTGRPGTILPFRHQRAGQFLIAAPVRGSNGRAFIHWVWLSGNEFTAMPW
KMTPENIAVLMKAMYGAPYGWGNFNFYNDCSAEIRSLLMPFGIFLPRHSSAQVEAAGRVVDLSHKSPQMRIDYLTRYGKP
FTTLVYIPGHIMLYIGNTTMNGQVVPMTYQNIWGLRPNHANSRSIIGEAVFLPLLRFYPESPELISLAGKVLFKLGYIE

Sequences:

>Translated_479_residues
MMMQKKTWAVLLIPLCLTACHQTTYRSTAKDEIFTGSYIDPTKTRFPLADYSQSVDKWIPPDSADYTIPVIDNATQQRYF
NALKSHYFGMDSEAHSPWNGFYITALLKKNAAQARDASIKQFLSDGSAYWGENFRLYTSRWKEEVRGNTDTQIDNIYHAS
RRGIMVRESLVRALPTDDPLFNDPRQAGEGYPFDNLQMSSLRPGTPVYTLTKSKDQRWQYVVSPAVTGWVHSEDIASTDQ
KFITQWVLLAHKQLGAFINAPVSVHVAGVYYFTGRPGTILPFRHQRAGQFLIAAPVRGSNGRAFIHWVWLSGNEFTAMPW
KMTPENIAVLMKAMYGAPYGWGNFNFYNDCSAEIRSLLMPFGIFLPRHSSAQVEAAGRVVDLSHKSPQMRIDYLTRYGKP
FTTLVYIPGHIMLYIGNTTMNGQVVPMTYQNIWGLRPNHANSRSIIGEAVFLPLLRFYPESPELISLAGKVLFKLGYIE
>Mature_479_residues
MMMQKKTWAVLLIPLCLTACHQTTYRSTAKDEIFTGSYIDPTKTRFPLADYSQSVDKWIPPDSADYTIPVIDNATQQRYF
NALKSHYFGMDSEAHSPWNGFYITALLKKNAAQARDASIKQFLSDGSAYWGENFRLYTSRWKEEVRGNTDTQIDNIYHAS
RRGIMVRESLVRALPTDDPLFNDPRQAGEGYPFDNLQMSSLRPGTPVYTLTKSKDQRWQYVVSPAVTGWVHSEDIASTDQ
KFITQWVLLAHKQLGAFINAPVSVHVAGVYYFTGRPGTILPFRHQRAGQFLIAAPVRGSNGRAFIHWVWLSGNEFTAMPW
KMTPENIAVLMKAMYGAPYGWGNFNFYNDCSAEIRSLLMPFGIFLPRHSSAQVEAAGRVVDLSHKSPQMRIDYLTRYGKP
FTTLVYIPGHIMLYIGNTTMNGQVVPMTYQNIWGLRPNHANSRSIIGEAVFLPLLRFYPESPELISLAGKVLFKLGYIE

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54380; Mature: 54380

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMQKKTWAVLLIPLCLTACHQTTYRSTAKDEIFTGSYIDPTKTRFPLADYSQSVDKWIP
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCC
PDSADYTIPVIDNATQQRYFNALKSHYFGMDSEAHSPWNGFYITALLKKNAAQARDASIK
CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
QFLSDGSAYWGENFRLYTSRWKEEVRGNTDTQIDNIYHASRRGIMVRESLVRALPTDDPL
HHHHCCCCCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
FNDPRQAGEGYPFDNLQMSSLRPGTPVYTLTKSKDQRWQYVVSPAVTGWVHSEDIASTDQ
CCCHHHHCCCCCCCCEECCCCCCCCCEEEEECCCCCCEEEEECCHHCCCEECCHHHHHHH
KFITQWVLLAHKQLGAFINAPVSVHVAGVYYFTGRPGTILPFRHQRAGQFLIAAPVRGSN
HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEECCCCCCCCCEEEEECEECCC
GRAFIHWVWLSGNEFTAMPWKMTPENIAVLMKAMYGAPYGWGNFNFYNDCSAEIRSLLMP
CCEEEEEEEECCCEEEECCCEECHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
FGIFLPRHSSAQVEAAGRVVDLSHKSPQMRIDYLTRYGKPFTTLVYIPGHIMLYIGNTTM
HHHCCCCCCCCCEEECCCEEEECCCCCCEEHHHHHHCCCCEEEEEEECCEEEEEECCCCC
NGQVVPMTYQNIWGLRPNHANSRSIIGEAVFLPLLRFYPESPELISLAGKVLFKLGYIE
CCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMMQKKTWAVLLIPLCLTACHQTTYRSTAKDEIFTGSYIDPTKTRFPLADYSQSVDKWIP
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCC
PDSADYTIPVIDNATQQRYFNALKSHYFGMDSEAHSPWNGFYITALLKKNAAQARDASIK
CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
QFLSDGSAYWGENFRLYTSRWKEEVRGNTDTQIDNIYHASRRGIMVRESLVRALPTDDPL
HHHHCCCCCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
FNDPRQAGEGYPFDNLQMSSLRPGTPVYTLTKSKDQRWQYVVSPAVTGWVHSEDIASTDQ
CCCHHHHCCCCCCCCEECCCCCCCCCEEEEECCCCCCEEEEECCHHCCCEECCHHHHHHH
KFITQWVLLAHKQLGAFINAPVSVHVAGVYYFTGRPGTILPFRHQRAGQFLIAAPVRGSN
HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEECCCCCCCCCEEEEECEECCC
GRAFIHWVWLSGNEFTAMPWKMTPENIAVLMKAMYGAPYGWGNFNFYNDCSAEIRSLLMP
CCEEEEEEEECCCEEEECCCEECHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
FGIFLPRHSSAQVEAAGRVVDLSHKSPQMRIDYLTRYGKPFTTLVYIPGHIMLYIGNTTM
HHHCCCCCCCCCEEECCCEEEECCCCCCEEHHHHHHCCCCEEEEEEECCEEEEEECCCCC
NGQVVPMTYQNIWGLRPNHANSRSIIGEAVFLPLLRFYPESPELISLAGKVLFKLGYIE
CCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA