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The map label for this gene is yebS [H]

Identifier: 16765189

GI number: 16765189

Start: 1944612

End: 1945895

Strand: Direct

Name: yebS [H]

Synonym: STM1848

Alternate gene names: 16765189

Gene position: 1944612-1945895 (Clockwise)

Preceding gene: 16765184

Following gene: 16765190

Centisome position: 40.03

GC content: 52.34

Gene sequence:

>1284_bases
ATGGCTCTGAACACCTCACACGTCACGCCAACAAAAAAGCTAACGATCAGGTCAATTAGCGAAGCGCTGCCGCGCAGCCA
CTACCAGCGCTGCCCTGAATGCGACATGCTGTTCAGCTTGCCGGAGATGAGCGCTCATCAAAGCGCTTATTGTCCTCGTT
GCCAGGCCAAAATTCGCGATGGGCGCGACTGGTCGCTGACGCGGCTGACCGCGATGGCGGTAACCATGCTGCTATTGATG
CCGTTTGCCTGGAGCGAACCGTTACTCCATATCTACCTGTTGGGCGTACGCATTGATGCCAATGTGATGCACGGCATCTG
GCAAATGACGCAGCAGGGCGATCCGTTAACCGCCGCAATGGTGCTCTTTTGCGTGGTGGGCGCGCCGCTTATTCTGGTTT
TTTCAATTGCTTACCTGTGGTTTGGCAGCCTTCTCGGCATGAATCTGCGTCCAGTCCTGCTGATGCTGGAAAAACTGAAA
GAGTGGGTGATGCTGGACATCTATCTGGTCGGTATTGGCGTTGCCTCTATCAAAGTGCAGGACTATGCCTTTCTGCAGCC
GGGCATCGGGCTTTTAGCGTTCGTCTCGTTGGTGGTTCTTAGCATTCTGACTATGATTCATCTGAATGTGGAGCAACTAT
GGGAACGATTTTATCCGCAGCGCCCTGCTCAACGTGCGGACGAAAGATTGCGCGTCTGTCTTGGCTGCCACTTTAGCGGC
TATCCGGATGCGAAAGGACGCTGCCCGCGTTGTCATATTCCGCTACGGTTACGCAGAAAACAGAGCATACAGAAATGTTG
GGCGGCCTTGCTGGCGTCTATTGTCTTTTTGCTGCCGGCAAACCTGCTGCCTATCTCGGTAATCTACATTAATGGCGGGC
GTCAGGAAGATACTATCCTGTCGGGCATTATGTCGCTTGCCAGCAGCAATATCGCCGTCGCCGCCGTCGTTTTTATCGCC
AGTATTTTGGTGCCGTTTACCAAAGTCATCGTGATGTTTACGCTACTGTTGAGTATCCATTTTAAATGCCAACAGGGACT
GCGGACGCGAATTCTGTTGCTGCGTCTGGTGACATGGATAGGCCGCTGGTCGATGCTTGATCTTTTCGTTATCTCGTTAA
CCATGTCTCTGATTAATCGCGATCAGATTCTGGCTTTTACTATGGGACCGGCTGCGTTTTATTTCGGCGCAGCGGTAATT
TTGACTATTCTTGCAGTGGAATGGCTGGATAGCCGCTTACTTTGGGATGCACATGAGTCAGGAAACGCCCGCTTCGAAGA
CTGA

Upstream 100 bases:

>100_bases
AAACACAGGCTATTAAAATAAGCATTAAATGCGTTCTTGCTCAAGATTATTCCTGTCATGAGTTAAGATTACATTATTCT
AACACTTTGATTCACGATAC

Downstream 100 bases:

>100_bases
AGCGCAAATTAAAACCAAACGCCGTATTTCACCTTTCTGGCTGCTACCGCTTATCGCGCTAATGATCGCGGGGTGGCTGG
TATGGGATAGCTACCAGGAT

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MALNTSHVTPTKKLTIRSISEALPRSHYQRCPECDMLFSLPEMSAHQSAYCPRCQAKIRDGRDWSLTRLTAMAVTMLLLM
PFAWSEPLLHIYLLGVRIDANVMHGIWQMTQQGDPLTAAMVLFCVVGAPLILVFSIAYLWFGSLLGMNLRPVLLMLEKLK
EWVMLDIYLVGIGVASIKVQDYAFLQPGIGLLAFVSLVVLSILTMIHLNVEQLWERFYPQRPAQRADERLRVCLGCHFSG
YPDAKGRCPRCHIPLRLRRKQSIQKCWAALLASIVFLLPANLLPISVIYINGGRQEDTILSGIMSLASSNIAVAAVVFIA
SILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRLVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVI
LTILAVEWLDSRLLWDAHESGNARFED

Sequences:

>Translated_427_residues
MALNTSHVTPTKKLTIRSISEALPRSHYQRCPECDMLFSLPEMSAHQSAYCPRCQAKIRDGRDWSLTRLTAMAVTMLLLM
PFAWSEPLLHIYLLGVRIDANVMHGIWQMTQQGDPLTAAMVLFCVVGAPLILVFSIAYLWFGSLLGMNLRPVLLMLEKLK
EWVMLDIYLVGIGVASIKVQDYAFLQPGIGLLAFVSLVVLSILTMIHLNVEQLWERFYPQRPAQRADERLRVCLGCHFSG
YPDAKGRCPRCHIPLRLRRKQSIQKCWAALLASIVFLLPANLLPISVIYINGGRQEDTILSGIMSLASSNIAVAAVVFIA
SILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRLVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVI
LTILAVEWLDSRLLWDAHESGNARFED
>Mature_426_residues
ALNTSHVTPTKKLTIRSISEALPRSHYQRCPECDMLFSLPEMSAHQSAYCPRCQAKIRDGRDWSLTRLTAMAVTMLLLMP
FAWSEPLLHIYLLGVRIDANVMHGIWQMTQQGDPLTAAMVLFCVVGAPLILVFSIAYLWFGSLLGMNLRPVLLMLEKLKE
WVMLDIYLVGIGVASIKVQDYAFLQPGIGLLAFVSLVVLSILTMIHLNVEQLWERFYPQRPAQRADERLRVCLGCHFSGY
PDAKGRCPRCHIPLRLRRKQSIQKCWAALLASIVFLLPANLLPISVIYINGGRQEDTILSGIMSLASSNIAVAAVVFIAS
ILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRLVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVIL
TILAVEWLDSRLLWDAHESGNARFED

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=427, Percent_Identity=85.7142857142857, Blast_Score=775, Evalue=0.0,
Organism=Escherichia coli, GI1787183, Length=396, Percent_Identity=29.040404040404, Blast_Score=145, Evalue=6e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 48104; Mature: 47973

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNTSHVTPTKKLTIRSISEALPRSHYQRCPECDMLFSLPEMSAHQSAYCPRCQAKIRD
CCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCC
GRDWSLTRLTAMAVTMLLLMPFAWSEPLLHIYLLGVRIDANVMHGIWQMTQQGDPLTAAM
CCCCHHHHHHHHHHHHHHHHHCCCCCHHEEHEEEEEEECHHHHHHHHHHHCCCCCHHHHH
VLFCVVGAPLILVFSIAYLWFGSLLGMNLRPVLLMLEKLKEWVMLDIYLVGIGVASIKVQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
DYAFLQPGIGLLAFVSLVVLSILTMIHLNVEQLWERFYPQRPAQRADERLRVCLGCHFSG
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
YPDAKGRCPRCHIPLRLRRKQSIQKCWAALLASIVFLLPANLLPISVIYINGGRQEDTIL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHH
SGIMSLASSNIAVAAVVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRLVTWI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHES
CCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GNARFED
CCCCCCC
>Mature Secondary Structure 
ALNTSHVTPTKKLTIRSISEALPRSHYQRCPECDMLFSLPEMSAHQSAYCPRCQAKIRD
CCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCC
GRDWSLTRLTAMAVTMLLLMPFAWSEPLLHIYLLGVRIDANVMHGIWQMTQQGDPLTAAM
CCCCHHHHHHHHHHHHHHHHHCCCCCHHEEHEEEEEEECHHHHHHHHHHHCCCCCHHHHH
VLFCVVGAPLILVFSIAYLWFGSLLGMNLRPVLLMLEKLKEWVMLDIYLVGIGVASIKVQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
DYAFLQPGIGLLAFVSLVVLSILTMIHLNVEQLWERFYPQRPAQRADERLRVCLGCHFSG
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
YPDAKGRCPRCHIPLRLRRKQSIQKCWAALLASIVFLLPANLLPISVIYINGGRQEDTIL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHH
SGIMSLASSNIAVAAVVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRLVTWI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHES
CCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GNARFED
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]