| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yebT [H]
Identifier: 16765190
GI number: 16765190
Start: 1945858
End: 1948497
Strand: Direct
Name: yebT [H]
Synonym: STM1849
Alternate gene names: 16765190
Gene position: 1945858-1948497 (Clockwise)
Preceding gene: 16765189
Following gene: 16765191
Centisome position: 40.06
GC content: 54.66
Gene sequence:
>2640_bases ATGCACATGAGTCAGGAAACGCCCGCTTCGAAGACTGAAGCGCAAATTAAAACCAAACGCCGTATTTCACCTTTCTGGCT GCTACCGCTTATCGCGCTAATGATCGCGGGGTGGCTGGTATGGGATAGCTACCAGGATCGCGGCAATAGCGTGACTATCG ATTTTATGTCGGCGGACGGTATCGTACCGGGCCGTACTCCCGTGCGTTATCAGGGAGTAGAAGTCGGCACCGTGGAAGAT GTCAGTCTGAGCAAAGATCTGCGCAAAATTGAAGTTCGCGTCAGTATCAAATCAGATATGGAAGATGCGTTGCGCGAAGA GACGCAATTCTGGCTGGTGACGCCCAAAGCCTCGCTGGCGGGCGTTTCCGGCCTGGATGCGTTGGTCGGCGGGAATTACA TCGGTATGATGCCAGGTAAAGGCAAGCCCAGAGATCATTTCGTCGCCCTGGATACACAGCCTAAATACCGGCTTAGCAAC GGCGATCTGATGATTCATCTCCATGCGCCGGATCTCGGTTCGCTTAATAGCGGTTCACTGGTCTATTTCCGTAAAATCCC TGTCGGACGGGTGTATGACTATTCGATTAACCCTAACAAACAGGGCGTGACGATTGACGTTCTGATTGAGCGACGGTTTA CCGATCTGGTGAAAAAAGGCAGCCGTTTTTGGAATGTCTCCGGCATTGACGCCGATCTAAGCCTGAGCGGCGCGAAGGTG AAACTGGAGAGCCTCGCGGCCCTGGTCAATGGCGCGATTGCGTTTGACTCACCGGACAATTCCAAACCCGCCGCCCAGGA TGACACGTTCGGCTTATATAAAGATTTAGCCCACAGCCAACGAGGGGTAATCGTTAAACTTGAGCTGCCCAGCGGAGACG GTCTGAAAGCGGAATCTACGCCGCTAATGTACCAGGGACTGGAGGTGGGTGAGCTTTCTAAACTGACGCTCAACCCTGGC GGTAAAGTCACCGGAGAGATGACCGTCGATCCCAGCGTTGTTCCGCTGATGCGGGAAAATACGCGTATTGAGTTACGCAA TCCCAAACTGTCGCTAAGTGACGCGAATATCAGTTCGTTGTTAACCGGAAAAACCTTCGAGCTGGTGCCGGGCGACGGCG AACCGCGCAGTGAATTTGTGGTGGTGCCGGGTGAAAAAGCCCTGCTGCATGAGGCGAATGCCTTAACCCTGACGCTGACG GCCCCGGAAAGTTACGGCATCGAACCGGGCCAGCCGTTAATTTTACATGGCGTAAAAATTGGCCAGGTCATTGAGCGCAA CTTATCCAGTAAAGGCGTGTCATTCATCGTCGCGATTGAACCGCAGCACCGGGATTTGGTACAGGGCGACAGTAAATTCG TGGTTAACAGCCGGGTGGATGTCAAAGTTGGCCTTGACGGCGTAGAGTTCCTCGGCGCCAGCGCCAGCGAGTGGATTGAC GGCGGAATTCGTATTTTACCCGGTACGAGCGGGAAGATGAAATCCACCTACCCGCTCTATGCTAACCTGGAAAAAGCGCT GGAAAATAGCCTCAGTGACTTACCGACTACCACCTTAACGCTGACGGCCGAAACGTTGCCGGATGTCCAGGCAGGTTCCG TCGTGCTGTATCGAAAATTTGAAGTAGGCGAAGTCATCACCGTTCGCCCACGCGCCAATACCTTTGACATCGACCTGCAT ATTAAGCCGGAGTATCGCCACCTGTTAACCAGCAATAGCGTGTTCTGGGCGGAAGGCGGCGCGAAAGTGCAACTTAACGG CAGCGGCCTAACGGTACAGGCCTCGCCACTCTCCCGCGCGCTGAAAGGGGCCATTAGTTTTGATAACCTGAGCGGCGCCA GCGCCAGCCGGCGCAAAGGCGATAAACGCATTCTTTATGCTTCAGAAACCTCCGCCCGCGCGGTAGGCGGACAAATTACG CTGCACGCGTTCGACGCCGGAAAATTGGCGGAAGGGATGCCCATTCGTTACCTCGGTATTGATATCGGCCAGATCCAGAC GCTGGAATTGATCACCGCACGTAATGAAGTGCAGGCAAAAGCCGTACTTTATCCGGAGTATGTACAGACATTTGCCCGCG CCGGGACACGTTTTTCCGTTATCACGCCACAAATTTCCGCGGCGGGCGTCGAGCATCTGGATACGATTCTCCAGCCCTAT ATTAACGTTGAGCCAGGACGCGGCGCGGCACGGCGCGACTTTGAACTGCAGGAAGCCACGATTACCGACTCACGCTATCT GGATGGGTTAAGCATCGTCGTGGAGGCGCCAGAAGCAGGCTCGCTTAATATTGGTACACCCGTCCTGTTCCGCGGTATCG AAGTGGGAACCGTCACCGGAATGTCCCTGGGGTCGCTCTCCGATCGGGTGATGATCACCTTGCGTATCAGTAAGCGTTAC CAATATCTGGTGCGGAATAACTCCGTATTCTGGCTTGCCTCCGGCTATAGTCTCGACTTTGGTCTGACAGGCGGCGTGGT GAAAACGGGGACATTTAATCAGTTCATCCGTGGCGGTATCGCCTTCGCTACTCCACCAGGTACGCCGCTGGCGCCAAAAG CGCAAGCCGGTAAGCATTTCCTGTTACAAGAGAGCGAACCGAAAGAGTGGCGTGAATGGGGCACCGCTCTGCCACGTTAA
Upstream 100 bases:
>100_bases ATTCTGGCTTTTACTATGGGACCGGCTGCGTTTTATTTCGGCGCAGCGGTAATTTTGACTATTCTTGCAGTGGAATGGCT GGATAGCCGCTTACTTTGGG
Downstream 100 bases:
>100_bases ACACCAGGCTCCGGCGTACTCGCGCCGGAGCGTTTTATGCTACACTGCGCGCCTGTTTTTTTGCCGGCGATACACCTGTG GCTCAACACGCTGTCTATTT
Product: inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 879; Mature: 879
Protein sequence:
>879_residues MHMSQETPASKTEAQIKTKRRISPFWLLPLIALMIAGWLVWDSYQDRGNSVTIDFMSADGIVPGRTPVRYQGVEVGTVED VSLSKDLRKIEVRVSIKSDMEDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKPRDHFVALDTQPKYRLSN GDLMIHLHAPDLGSLNSGSLVYFRKIPVGRVYDYSINPNKQGVTIDVLIERRFTDLVKKGSRFWNVSGIDADLSLSGAKV KLESLAALVNGAIAFDSPDNSKPAAQDDTFGLYKDLAHSQRGVIVKLELPSGDGLKAESTPLMYQGLEVGELSKLTLNPG GKVTGEMTVDPSVVPLMRENTRIELRNPKLSLSDANISSLLTGKTFELVPGDGEPRSEFVVVPGEKALLHEANALTLTLT APESYGIEPGQPLILHGVKIGQVIERNLSSKGVSFIVAIEPQHRDLVQGDSKFVVNSRVDVKVGLDGVEFLGASASEWID GGIRILPGTSGKMKSTYPLYANLEKALENSLSDLPTTTLTLTAETLPDVQAGSVVLYRKFEVGEVITVRPRANTFDIDLH IKPEYRHLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASRRKGDKRILYASETSARAVGGQIT LHAFDAGKLAEGMPIRYLGIDIGQIQTLELITARNEVQAKAVLYPEYVQTFARAGTRFSVITPQISAAGVEHLDTILQPY INVEPGRGAARRDFELQEATITDSRYLDGLSIVVEAPEAGSLNIGTPVLFRGIEVGTVTGMSLGSLSDRVMITLRISKRY QYLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWREWGTALPR
Sequences:
>Translated_879_residues MHMSQETPASKTEAQIKTKRRISPFWLLPLIALMIAGWLVWDSYQDRGNSVTIDFMSADGIVPGRTPVRYQGVEVGTVED VSLSKDLRKIEVRVSIKSDMEDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKPRDHFVALDTQPKYRLSN GDLMIHLHAPDLGSLNSGSLVYFRKIPVGRVYDYSINPNKQGVTIDVLIERRFTDLVKKGSRFWNVSGIDADLSLSGAKV KLESLAALVNGAIAFDSPDNSKPAAQDDTFGLYKDLAHSQRGVIVKLELPSGDGLKAESTPLMYQGLEVGELSKLTLNPG GKVTGEMTVDPSVVPLMRENTRIELRNPKLSLSDANISSLLTGKTFELVPGDGEPRSEFVVVPGEKALLHEANALTLTLT APESYGIEPGQPLILHGVKIGQVIERNLSSKGVSFIVAIEPQHRDLVQGDSKFVVNSRVDVKVGLDGVEFLGASASEWID GGIRILPGTSGKMKSTYPLYANLEKALENSLSDLPTTTLTLTAETLPDVQAGSVVLYRKFEVGEVITVRPRANTFDIDLH IKPEYRHLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASRRKGDKRILYASETSARAVGGQIT LHAFDAGKLAEGMPIRYLGIDIGQIQTLELITARNEVQAKAVLYPEYVQTFARAGTRFSVITPQISAAGVEHLDTILQPY INVEPGRGAARRDFELQEATITDSRYLDGLSIVVEAPEAGSLNIGTPVLFRGIEVGTVTGMSLGSLSDRVMITLRISKRY QYLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWREWGTALPR >Mature_879_residues MHMSQETPASKTEAQIKTKRRISPFWLLPLIALMIAGWLVWDSYQDRGNSVTIDFMSADGIVPGRTPVRYQGVEVGTVED VSLSKDLRKIEVRVSIKSDMEDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKPRDHFVALDTQPKYRLSN GDLMIHLHAPDLGSLNSGSLVYFRKIPVGRVYDYSINPNKQGVTIDVLIERRFTDLVKKGSRFWNVSGIDADLSLSGAKV KLESLAALVNGAIAFDSPDNSKPAAQDDTFGLYKDLAHSQRGVIVKLELPSGDGLKAESTPLMYQGLEVGELSKLTLNPG GKVTGEMTVDPSVVPLMRENTRIELRNPKLSLSDANISSLLTGKTFELVPGDGEPRSEFVVVPGEKALLHEANALTLTLT APESYGIEPGQPLILHGVKIGQVIERNLSSKGVSFIVAIEPQHRDLVQGDSKFVVNSRVDVKVGLDGVEFLGASASEWID GGIRILPGTSGKMKSTYPLYANLEKALENSLSDLPTTTLTLTAETLPDVQAGSVVLYRKFEVGEVITVRPRANTFDIDLH IKPEYRHLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASRRKGDKRILYASETSARAVGGQIT LHAFDAGKLAEGMPIRYLGIDIGQIQTLELITARNEVQAKAVLYPEYVQTFARAGTRFSVITPQISAAGVEHLDTILQPY INVEPGRGAARRDFELQEATITDSRYLDGLSIVVEAPEAGSLNIGTPVLFRGIEVGTVTGMSLGSLSDRVMITLRISKRY QYLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWREWGTALPR
Specific function: Unknown
COG id: COG3008
COG function: function code R; Paraquat-inducible protein B
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqiB family [H]
Homologues:
Organism=Escherichia coli, GI87081984, Length=877, Percent_Identity=90.5359179019384, Blast_Score=1637, Evalue=0.0, Organism=Escherichia coli, GI1787184, Length=347, Percent_Identity=29.971181556196, Blast_Score=164, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003399 [H]
Pfam domain/function: PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 95340; Mature: 95340
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHMSQETPASKTEAQIKTKRRISPFWLLPLIALMIAGWLVWDSYQDRGNSVTIDFMSADG CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEECCC IVPGRTPVRYQGVEVGTVEDVSLSKDLRKIEVRVSIKSDMEDALREETQFWLVTPKASLA CCCCCCCCEECCEEECCCCCCHHHCCCEEEEEEEEEHHHHHHHHHCCCEEEEEECCHHHC GVSGLDALVGGNYIGMMPGKGKPRDHFVALDTQPKYRLSNGDLMIHLHAPDLGSLNSGSL CCCCCHHHHCCCEEEECCCCCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCE VYFRKIPVGRVYDYSINPNKQGVTIDVLIERRFTDLVKKGSRFWNVSGIDADLSLSGAKV EEEEECCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHCCCCEEEEECCCCCEECCCCEE KLESLAALVNGAIAFDSPDNSKPAAQDDTFGLYKDLAHSQRGVIVKLELPSGDGLKAEST EHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC PLMYQGLEVGELSKLTLNPGGKVTGEMTVDPSVVPLMRENTRIELRNPKLSLSDANISSL CEEEECCCCCCEEEEEECCCCCEEEEEEECCCEEEEECCCCEEEEECCEEEECCCCHHHH LTGKTFELVPGDGEPRSEFVVVPGEKALLHEANALTLTLTAPESYGIEPGQPLILHGVKI HCCCEEEEECCCCCCCCCEEEECCCHHEEECCCEEEEEEECCCCCCCCCCCEEEEECCHH GQVIERNLSSKGVSFIVAIEPQHRDLVQGDSKFVVNSRVDVKVGLDGVEFLGASASEWID HHHHHHCCCCCCCEEEEEECCCCCHHHCCCCEEEEECEEEEEECCCHHHHHCCCHHHHCC GGIRILPGTSGKMKSTYPLYANLEKALENSLSDLPTTTLTLTAETLPDVQAGSVVLYRKF CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEE EVGEVITVRPRANTFDIDLHIKPEYRHLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRA CCCCEEEEECCCCEEEEEEEECCHHHHHHCCCCEEEECCCCEEEECCCCEEEECCHHHHH LKGAISFDNLSGASASRRKGDKRILYASETSARAVGGQITLHAFDAGKLAEGMPIRYLGI HHCCEEECCCCCCCCHHCCCCCEEEEECCCCCEECCCEEEEEEECCCCCCCCCCEEEEEC DIGQIQTLELITARNEVQAKAVLYPEYVQTFARAGTRFSVITPQISAAGVEHLDTILQPY CCCCEEEEEEEECCCCCEEEEEECHHHHHHHHHCCCEEEEECCCHHHCCHHHHHHHHHCC INVEPGRGAARRDFELQEATITDSRYLDGLSIVVEAPEAGSLNIGTPVLFRGIEVGTVTG EEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHEECEEEEEECC MSLGSLSDRVMITLRISKRYQYLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGI CCCCCCCCEEEEEEEECCCEEEEEECCCEEEEEECCEEEECCCCCEEECCCHHHHHHCCE AFATPPGTPLAPKAQAGKHFLLQESEPKEWREWGTALPR EEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCC >Mature Secondary Structure MHMSQETPASKTEAQIKTKRRISPFWLLPLIALMIAGWLVWDSYQDRGNSVTIDFMSADG CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEECCC IVPGRTPVRYQGVEVGTVEDVSLSKDLRKIEVRVSIKSDMEDALREETQFWLVTPKASLA CCCCCCCCEECCEEECCCCCCHHHCCCEEEEEEEEEHHHHHHHHHCCCEEEEEECCHHHC GVSGLDALVGGNYIGMMPGKGKPRDHFVALDTQPKYRLSNGDLMIHLHAPDLGSLNSGSL CCCCCHHHHCCCEEEECCCCCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCE VYFRKIPVGRVYDYSINPNKQGVTIDVLIERRFTDLVKKGSRFWNVSGIDADLSLSGAKV EEEEECCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHCCCCEEEEECCCCCEECCCCEE KLESLAALVNGAIAFDSPDNSKPAAQDDTFGLYKDLAHSQRGVIVKLELPSGDGLKAEST EHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC PLMYQGLEVGELSKLTLNPGGKVTGEMTVDPSVVPLMRENTRIELRNPKLSLSDANISSL CEEEECCCCCCEEEEEECCCCCEEEEEEECCCEEEEECCCCEEEEECCEEEECCCCHHHH LTGKTFELVPGDGEPRSEFVVVPGEKALLHEANALTLTLTAPESYGIEPGQPLILHGVKI HCCCEEEEECCCCCCCCCEEEECCCHHEEECCCEEEEEEECCCCCCCCCCCEEEEECCHH GQVIERNLSSKGVSFIVAIEPQHRDLVQGDSKFVVNSRVDVKVGLDGVEFLGASASEWID HHHHHHCCCCCCCEEEEEECCCCCHHHCCCCEEEEECEEEEEECCCHHHHHCCCHHHHCC GGIRILPGTSGKMKSTYPLYANLEKALENSLSDLPTTTLTLTAETLPDVQAGSVVLYRKF CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEE EVGEVITVRPRANTFDIDLHIKPEYRHLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRA CCCCEEEEECCCCEEEEEEEECCHHHHHHCCCCEEEECCCCEEEECCCCEEEECCHHHHH LKGAISFDNLSGASASRRKGDKRILYASETSARAVGGQITLHAFDAGKLAEGMPIRYLGI HHCCEEECCCCCCCCHHCCCCCEEEEECCCCCEECCCEEEEEEECCCCCCCCCCEEEEEC DIGQIQTLELITARNEVQAKAVLYPEYVQTFARAGTRFSVITPQISAAGVEHLDTILQPY CCCCEEEEEEEECCCCCEEEEEECHHHHHHHHHCCCEEEEECCCHHHCCHHHHHHHHHCC INVEPGRGAARRDFELQEATITDSRYLDGLSIVVEAPEAGSLNIGTPVLFRGIEVGTVTG EEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHEECEEEEEECC MSLGSLSDRVMITLRISKRYQYLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGI CCCCCCCCEEEEEEEECCCEEEEEECCCEEEEEECCEEEECCCCCEEECCCHHHHHHCCE AFATPPGTPLAPKAQAGKHFLLQESEPKEWREWGTALPR EEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]